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The map label for this gene is 54293024

Identifier: 54293024

GI number: 54293024

Start: 65216

End: 65959

Strand: Direct

Name: 54293024

Synonym: lpl0060

Alternate gene names: NA

Gene position: 65216-65959 (Clockwise)

Preceding gene: 54293022

Following gene: 54293025

Centisome position: 1.95

GC content: 39.25

Gene sequence:

>744_bases
ATGAATCATACTTCAATTAAAAAAGCGGTTTTGTATCGCATGGTGATAGAACATCATGTTTGCCCTTATGGTCTCAAAGC
TAGAGATTTATTAAGACGTCAAGGCTATGAGGTAGAAGATAATTGGCTAACAACCCGTGAACAGGTCGAGGCGTTTAAGG
ATAAACACAATGTGAAAACCACACCTCAGACTTTTATCAACGATGAGCGTATAGGTGGTTATGACGATTTACGGCGTTAC
TTTGGAAAGAAAGTAAGAGACCCAAAAGAAAAAAGTTATCGCCCCGTCATCGTACTGTTTGCGATTACCGCTTTAATGGC
GATGGCAGTGAGTTATACTCGCTTTGCCAATCCTTTTACACCACATGCTTTAAGCTGGTTTATTGCATTTAGCATGGCAG
TTCTTGCTTTATTAAAGCTCCAGAATATCGAAAGCTTCTCAACCATGTTTTTAAACTATGACCTCCTGGCCAAACGCTGG
GTTCCTTACAGCTATATTTACCCATTTGCTGAAGGTTTAGCGGGGATATTAATGATTGCAGGAGCGTTAAATTGGCTTTC
TATTCCAATTGCCTTATTTATTGGAACTGTAGGTGCTCTTTCGGTTTTTAAAGCCGTTTATATCGACAAGCGTGAGCTTA
AATGTGCCTGTGTGGGAGGTGATAGTAACGTACCTTTAGGATTTATTTCTCTCACTGAAAATTTAATGATGATAGGAATG
GCTTTATTCATGTTGCTTATGTAA

Upstream 100 bases:

>100_bases
TAGCAAATTCACCAATTTTTTTATTATTCATTACTTGACTCCGTACTATAGTACGTACTCTATATTACTATTTATAGACC
ATTAATCATAGGGGATAGAA

Downstream 100 bases:

>100_bases
TTCAGCTAGCAAGCGTAGCCCGGATTAAGTGGAACGAAATCCGGGAGTATGACTGCGCTTGCATCAGTGCTACGCTAGCT
ATACACTGTCAACATATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane Associated Glutaredoxin; DoxX Subfamily; Glutaredoxin Like Protein; Glutaredoxine Domain-Containing Protein; Heavy Metal Transport/Detoxification Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MNHTSIKKAVLYRMVIEHHVCPYGLKARDLLRRQGYEVEDNWLTTREQVEAFKDKHNVKTTPQTFINDERIGGYDDLRRY
FGKKVRDPKEKSYRPVIVLFAITALMAMAVSYTRFANPFTPHALSWFIAFSMAVLALLKLQNIESFSTMFLNYDLLAKRW
VPYSYIYPFAEGLAGILMIAGALNWLSIPIALFIGTVGALSVFKAVYIDKRELKCACVGGDSNVPLGFISLTENLMMIGM
ALFMLLM

Sequences:

>Translated_247_residues
MNHTSIKKAVLYRMVIEHHVCPYGLKARDLLRRQGYEVEDNWLTTREQVEAFKDKHNVKTTPQTFINDERIGGYDDLRRY
FGKKVRDPKEKSYRPVIVLFAITALMAMAVSYTRFANPFTPHALSWFIAFSMAVLALLKLQNIESFSTMFLNYDLLAKRW
VPYSYIYPFAEGLAGILMIAGALNWLSIPIALFIGTVGALSVFKAVYIDKRELKCACVGGDSNVPLGFISLTENLMMIGM
ALFMLLM
>Mature_247_residues
MNHTSIKKAVLYRMVIEHHVCPYGLKARDLLRRQGYEVEDNWLTTREQVEAFKDKHNVKTTPQTFINDERIGGYDDLRRY
FGKKVRDPKEKSYRPVIVLFAITALMAMAVSYTRFANPFTPHALSWFIAFSMAVLALLKLQNIESFSTMFLNYDLLAKRW
VPYSYIYPFAEGLAGILMIAGALNWLSIPIALFIGTVGALSVFKAVYIDKRELKCACVGGDSNVPLGFISLTENLMMIGM
ALFMLLM

Specific function: Unknown

COG id: COG0695

COG function: function code O; Glutaredoxin and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28159; Mature: 28159

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHC
>Mature Secondary Structure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HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA