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The map label for this gene is sdbB

Identifier: 54293022

GI number: 54293022

Start: 63198

End: 64445

Strand: Direct

Name: sdbB

Synonym: lpl0058

Alternate gene names: NA

Gene position: 63198-64445 (Clockwise)

Preceding gene: 54293021

Following gene: 54293024

Centisome position: 1.89

GC content: 39.9

Gene sequence:

>1248_bases
ATGACCAGAAGTAAAGGTCCAAAGACGCGAAGTAGTTCATTCTTTCAGAATCATTTGAAAGTCTCTGTTGGGAAATTATT
GTTCTCAGAGGGAGTGGGCGATTGGTATAAAAAAAAGGGCTATGGAGCTCAAGATACGGATAAGGATTTCCTGGCACCAT
TTGCTGATTTTATTAATCAACAAAAAAACAATCCTGAAGCTACTTATTTTAATGCGTTCCAGAATCTTGAATTAACATTA
AACAGGGTACCCTCTCAATTAGTATCCGGGGATTGGTGTGAATTGGAGGTGCTGAAATGCGAACCAGAAGCAGATTCTCC
TCAAAAACCGGGTACTGGTAAACATATTGTATATTTTCCTGGCGCAAATACCTACTATCAAGCTTGCTTTCGAGATATTA
GCGCTGCAGCAAAAGAAACGGGAGCAACGGTACACGCGCTCAATTACCCGGGCATTGGGATGAGTACTGGAGAGGTTGTG
GAAGCTAATGATTTAACCAATGCCGGTATTGCAGTGGTCCAGTCTTTACTAAAGCAGGGTGTCAAGCCAGATGATATTGT
TTTGCAAGGCGATTGCTTTGGGGCGTCCGTTGCACTGGAGGTAAAAAAAGAGATTGAGAAGCAAGCGGATATAAAAGTAC
GATTGATAATGAATAATGCATTTAAATCATTTAAAGCAGCTGTTTCTGACTTAATTGGCAGATCTCCTTTAATTCCCTCG
ATATCAAAATCGATTGTTAAAAATTTGCTGGAATTTACCGGATGGAATGTTGTCCCTGGACAAAAATACATCCATTCAGA
TCCCTACCAGTGTTATATTCAGCATGAAGGGGATCAAACCTTAACTACCGCGACTTTATCCTCCAAGGTCGCTAAATACA
AGGAAGAAATAAGAACAGGGAGAACCACATCCCACTCAAGAGATCCTGTTATTGATAGATGCCCTGAGGAATACAAACCA
TATCGTGACTTTCTTGATGAGAATTGTTTTGTCAGAGTTAGAGATTCTGCAAAAGAACGGTTAGCCGCTAAATTTGGTGT
GGACAGCCGTGGTGAGGTTAATGCCCATTTTGCCGATCTTTGTGAATTGGAAATGCTGGGAGGGCAATCGGTCTATGAAG
GATTTGTTAATAACTATTTAGTCATGTCAGATAAATACATAAAAGCACACCCTCAAAAGGATTATGATCCTGATAAAATT
AATTTTCTTTCTTCTAATCCTATAGGCTATACCCCAAAATCAAGTTAA

Upstream 100 bases:

>100_bases
TAAGAGATCTCCTTGCAGTCGAGCTAGAATTTGATTTGTTCAAAAGCGACGAACTATACTTAAATTGACATGTTCTTTGT
ATTATCAATTTGAGTCGGCA

Downstream 100 bases:

>100_bases
TTCAAAGCAAGTAGTCCTCCTCCCATGCTCTGCTATTGTTATGTCGATAAGGTAAGCTCATTGATAAAATCCGGTTAAAG
GATAATATCATCCAAACATT

Product: SdbB protein (putative substrate of the Dot/Icm system)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTRSKGPKTRSSSFFQNHLKVSVGKLLFSEGVGDWYKKKGYGAQDTDKDFLAPFADFINQQKNNPEATYFNAFQNLELTL
NRVPSQLVSGDWCELEVLKCEPEADSPQKPGTGKHIVYFPGANTYYQACFRDISAAAKETGATVHALNYPGIGMSTGEVV
EANDLTNAGIAVVQSLLKQGVKPDDIVLQGDCFGASVALEVKKEIEKQADIKVRLIMNNAFKSFKAAVSDLIGRSPLIPS
ISKSIVKNLLEFTGWNVVPGQKYIHSDPYQCYIQHEGDQTLTTATLSSKVAKYKEEIRTGRTTSHSRDPVIDRCPEEYKP
YRDFLDENCFVRVRDSAKERLAAKFGVDSRGEVNAHFADLCELEMLGGQSVYEGFVNNYLVMSDKYIKAHPQKDYDPDKI
NFLSSNPIGYTPKSS

Sequences:

>Translated_415_residues
MTRSKGPKTRSSSFFQNHLKVSVGKLLFSEGVGDWYKKKGYGAQDTDKDFLAPFADFINQQKNNPEATYFNAFQNLELTL
NRVPSQLVSGDWCELEVLKCEPEADSPQKPGTGKHIVYFPGANTYYQACFRDISAAAKETGATVHALNYPGIGMSTGEVV
EANDLTNAGIAVVQSLLKQGVKPDDIVLQGDCFGASVALEVKKEIEKQADIKVRLIMNNAFKSFKAAVSDLIGRSPLIPS
ISKSIVKNLLEFTGWNVVPGQKYIHSDPYQCYIQHEGDQTLTTATLSSKVAKYKEEIRTGRTTSHSRDPVIDRCPEEYKP
YRDFLDENCFVRVRDSAKERLAAKFGVDSRGEVNAHFADLCELEMLGGQSVYEGFVNNYLVMSDKYIKAHPQKDYDPDKI
NFLSSNPIGYTPKSS
>Mature_414_residues
TRSKGPKTRSSSFFQNHLKVSVGKLLFSEGVGDWYKKKGYGAQDTDKDFLAPFADFINQQKNNPEATYFNAFQNLELTLN
RVPSQLVSGDWCELEVLKCEPEADSPQKPGTGKHIVYFPGANTYYQACFRDISAAAKETGATVHALNYPGIGMSTGEVVE
ANDLTNAGIAVVQSLLKQGVKPDDIVLQGDCFGASVALEVKKEIEKQADIKVRLIMNNAFKSFKAAVSDLIGRSPLIPSI
SKSIVKNLLEFTGWNVVPGQKYIHSDPYQCYIQHEGDQTLTTATLSSKVAKYKEEIRTGRTTSHSRDPVIDRCPEEYKPY
RDFLDENCFVRVRDSAKERLAAKFGVDSRGEVNAHFADLCELEMLGGQSVYEGFVNNYLVMSDKYIKAHPQKDYDPDKIN
FLSSNPIGYTPKSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46169; Mature: 46038

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSKGPKTRSSSFFQNHLKVSVGKLLFSEGVGDWYKKKGYGAQDTDKDFLAPFADFINQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHH
QKNNPEATYFNAFQNLELTLNRVPSQLVSGDWCELEVLKCEPEADSPQKPGTGKHIVYFP
CCCCCCHHHHHHHHCHHHHHHHCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEC
GANTYYQACFRDISAAAKETGATVHALNYPGIGMSTGEVVEANDLTNAGIAVVQSLLKQG
CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCC
VKPDDIVLQGDCFGASVALEVKKEIEKQADIKVRLIMNNAFKSFKAAVSDLIGRSPLIPS
CCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCHH
ISKSIVKNLLEFTGWNVVPGQKYIHSDPYQCYIQHEGDQTLTTATLSSKVAKYKEEIRTG
HHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCC
RTTSHSRDPVIDRCPEEYKPYRDFLDENCFVRVRDSAKERLAAKFGVDSRGEVNAHFADL
CCCCCCCCCHHHCCCHHCCHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHH
CELEMLGGQSVYEGFVNNYLVMSDKYIKAHPQKDYDPDKINFLSSNPIGYTPKSS
HHHHHCCCHHHHHHHHCCEEEEECCHHCCCCCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TRSKGPKTRSSSFFQNHLKVSVGKLLFSEGVGDWYKKKGYGAQDTDKDFLAPFADFINQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHH
QKNNPEATYFNAFQNLELTLNRVPSQLVSGDWCELEVLKCEPEADSPQKPGTGKHIVYFP
CCCCCCHHHHHHHHCHHHHHHHCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEC
GANTYYQACFRDISAAAKETGATVHALNYPGIGMSTGEVVEANDLTNAGIAVVQSLLKQG
CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCC
VKPDDIVLQGDCFGASVALEVKKEIEKQADIKVRLIMNNAFKSFKAAVSDLIGRSPLIPS
CCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCHH
ISKSIVKNLLEFTGWNVVPGQKYIHSDPYQCYIQHEGDQTLTTATLSSKVAKYKEEIRTG
HHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCC
RTTSHSRDPVIDRCPEEYKPYRDFLDENCFVRVRDSAKERLAAKFGVDSRGEVNAHFADL
CCCCCCCCCHHHCCCHHCCHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHH
CELEMLGGQSVYEGFVNNYLVMSDKYIKAHPQKDYDPDKINFLSSNPIGYTPKSS
HHHHHCCCHHHHHHHHCCEEEEECCHHCCCCCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA