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The map label for this gene is ybaT [C]

Identifier: 54293012

GI number: 54293012

Start: 53414

End: 54709

Strand: Direct

Name: ybaT [C]

Synonym: lpl0048

Alternate gene names: 54293012

Gene position: 53414-54709 (Clockwise)

Preceding gene: 54293011

Following gene: 54293013

Centisome position: 1.6

GC content: 42.59

Gene sequence:

>1296_bases
ATGGATATGGATATTAAACATAAGCCTTTGAAGCGTGAACTCAGTCTATTTGGCGCTACGATGATGGGGCTCGGCTCTAT
TGTCGGGACGGGTGTTTTTGTCAGCATCGGAATTGCGGCGGGTGTCACAGGACCATCCGTCATTCTTGCTATTGCTTTGG
CAGCACTTGTTGCTACCTGTAATGCATTCTCCAGCGCTCAACTTGCTGCAAATCATGCTGTTAGTGGAGGTACTTATGAA
TATGGATATCGTTATTTACATCCTGCTTTTGGTTTTACTGCCGGTTGGATGTTTTTATGTGCGAAGAGCGCTTCCGCTGC
AACGGCAGCGCTTGGTTTTGCCGGTTATTTTATTCACTTGTCAGGTTTAGAGACGGTGCCTGTCATACCTATTGCTTTAG
CAGCGTCTATCACGCTAATACTTTTAGTCTTAAGTGGACTCAGAAGAACAAATACAGTGAATATTATTATTGTAATGATT
ACATTAATAACCTTAACCGTTTTTATAATAAGCGGATTACCTGATTTCATGCAAAGGGGAACTGCTAATCTGAGGCCCTT
CTTTCCTGTTTCAAAACAAGAAGGACTAAGTCATTTTTTTTATGCCACTGCTTTAATGTTTGTGGCTTATACCGGTTATG
GGAGAATTGCAACATTAGCGGAAGAGGTTAAAAATCCGGGAAAATTTATTCCTGCAGCGATTATTATCACGCTGATGGTG
AGTGCTGCACTTTATATCCTGGTGGGGCTTGTTGCTATTGGAGCTGTAGGGGTTGAAAAACTGGCCCAAGTGACTGAAAC
AAACGCAACTCCTTTAGAGAGCGCGGCACGAGCTATTGGTATCCCCGGATTGAGTGTTCTGGTCTCCATTGGGGCATGCA
CGGCCATGTTAGGGGTATTACTCAATTTAATACTTGGGTTATCTCGTGTGGCTTTAGCTATGGGTAGAAAAGGAGATTTA
CCGAAGATGTTTTGCTATGTATCAGAAACAAGACATGTTCCTGTTTTTGCTGTCATTGGAGTTGGAGTTGTAATTATTGC
TCTGGTATTGACTGGAAGTGTTGAAACAACATGGACTTTCAGTGCGTTTACAGTTTTAATCTATTACGCAATTACTAATC
TTGCTGCCTTGCGTTTGCCTAAAGAGGAGCAATTGTATCCACCTCTGTTTGCTATCGGAGGCTTACTGTCCTGCCTTTTC
CTGGCGTTTTGGGTTCCAATTGGAGTATGGATAACGGGAATCAGTTTACTTGTCCTGGGGCTTCTTTGGAAAGTTGTTGC
CAATCGTTTTTTATAA

Upstream 100 bases:

>100_bases
AATTATCGATTGGCCATATTAAAAAAACCAATACTCTTGACATGTTAATTGTGAATACCTGTTAAAACAGTAAAAGTATT
TATTGATAGGAAATAAAGCG

Downstream 100 bases:

>100_bases
AGGCAAGAAAAAAAGACGGATATATTCTAGAATAAACAAGAAGATCAGGGAAAAGGAACCGCAATGATCGATGGAATTAT
GGTTTTATGGTTTATTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDMDIKHKPLKRELSLFGATMMGLGSIVGTGVFVSIGIAAGVTGPSVILAIALAALVATCNAFSSAQLAANHAVSGGTYE
YGYRYLHPAFGFTAGWMFLCAKSASAATAALGFAGYFIHLSGLETVPVIPIALAASITLILLVLSGLRRTNTVNIIIVMI
TLITLTVFIISGLPDFMQRGTANLRPFFPVSKQEGLSHFFYATALMFVAYTGYGRIATLAEEVKNPGKFIPAAIIITLMV
SAALYILVGLVAIGAVGVEKLAQVTETNATPLESAARAIGIPGLSVLVSIGACTAMLGVLLNLILGLSRVALAMGRKGDL
PKMFCYVSETRHVPVFAVIGVGVVIIALVLTGSVETTWTFSAFTVLIYYAITNLAALRLPKEEQLYPPLFAIGGLLSCLF
LAFWVPIGVWITGISLLVLGLLWKVVANRFL

Sequences:

>Translated_431_residues
MDMDIKHKPLKRELSLFGATMMGLGSIVGTGVFVSIGIAAGVTGPSVILAIALAALVATCNAFSSAQLAANHAVSGGTYE
YGYRYLHPAFGFTAGWMFLCAKSASAATAALGFAGYFIHLSGLETVPVIPIALAASITLILLVLSGLRRTNTVNIIIVMI
TLITLTVFIISGLPDFMQRGTANLRPFFPVSKQEGLSHFFYATALMFVAYTGYGRIATLAEEVKNPGKFIPAAIIITLMV
SAALYILVGLVAIGAVGVEKLAQVTETNATPLESAARAIGIPGLSVLVSIGACTAMLGVLLNLILGLSRVALAMGRKGDL
PKMFCYVSETRHVPVFAVIGVGVVIIALVLTGSVETTWTFSAFTVLIYYAITNLAALRLPKEEQLYPPLFAIGGLLSCLF
LAFWVPIGVWITGISLLVLGLLWKVVANRFL
>Mature_431_residues
MDMDIKHKPLKRELSLFGATMMGLGSIVGTGVFVSIGIAAGVTGPSVILAIALAALVATCNAFSSAQLAANHAVSGGTYE
YGYRYLHPAFGFTAGWMFLCAKSASAATAALGFAGYFIHLSGLETVPVIPIALAASITLILLVLSGLRRTNTVNIIIVMI
TLITLTVFIISGLPDFMQRGTANLRPFFPVSKQEGLSHFFYATALMFVAYTGYGRIATLAEEVKNPGKFIPAAIIITLMV
SAALYILVGLVAIGAVGVEKLAQVTETNATPLESAARAIGIPGLSVLVSIGACTAMLGVLLNLILGLSRVALAMGRKGDL
PKMFCYVSETRHVPVFAVIGVGVVIIALVLTGSVETTWTFSAFTVLIYYAITNLAALRLPKEEQLYPPLFAIGGLLSCLF
LAFWVPIGVWITGISLLVLGLLWKVVANRFL

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI4507047, Length=387, Percent_Identity=24.8062015503876, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI187423910, Length=405, Percent_Identity=26.4197530864197, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI7657591, Length=405, Percent_Identity=26.4197530864197, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI110347453, Length=355, Percent_Identity=29.0140845070423, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI7657683, Length=352, Percent_Identity=24.7159090909091, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI258645169, Length=381, Percent_Identity=24.4094488188976, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI258614005, Length=381, Percent_Identity=23.6220472440945, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI258614003, Length=381, Percent_Identity=23.6220472440945, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI114326544, Length=375, Percent_Identity=23.4666666666667, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI114326550, Length=375, Percent_Identity=23.4666666666667, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI181337167, Length=341, Percent_Identity=25.8064516129032, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI115648063, Length=392, Percent_Identity=23.7244897959184, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI115648022, Length=392, Percent_Identity=23.7244897959184, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI33286428, Length=454, Percent_Identity=21.3656387665198, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI186910308, Length=401, Percent_Identity=21.9451371571072, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI186910306, Length=401, Percent_Identity=21.9451371571072, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI186910304, Length=401, Percent_Identity=21.9451371571072, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI71999149, Length=337, Percent_Identity=26.7062314540059, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1786694, Length=404, Percent_Identity=25.2475247524752, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081869, Length=386, Percent_Identity=24.6113989637306, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082023, Length=356, Percent_Identity=26.9662921348315, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87081708, Length=352, Percent_Identity=24.7159090909091, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87082250, Length=394, Percent_Identity=24.3654822335025, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1786302, Length=429, Percent_Identity=22.6107226107226, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17533459, Length=444, Percent_Identity=24.5495495495495, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17532491, Length=420, Percent_Identity=24.7619047619048, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17531343, Length=355, Percent_Identity=26.4788732394366, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI32566699, Length=408, Percent_Identity=23.0392156862745, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17540018, Length=362, Percent_Identity=24.0331491712707, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17568033, Length=351, Percent_Identity=23.6467236467236, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24667468, Length=411, Percent_Identity=27.007299270073, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24668806, Length=414, Percent_Identity=23.6714975845411, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI21356285, Length=414, Percent_Identity=23.6714975845411, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24668802, Length=414, Percent_Identity=23.6714975845411, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI221512776, Length=358, Percent_Identity=25.6983240223464, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24666159, Length=358, Percent_Identity=25.6983240223464, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24641995, Length=390, Percent_Identity=25.6410256410256, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24641993, Length=390, Percent_Identity=25.6410256410256, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21357367, Length=455, Percent_Identity=23.956043956044, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI45550968, Length=355, Percent_Identity=24.5070422535211, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI19921172, Length=355, Percent_Identity=24.5070422535211, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI161077963, Length=365, Percent_Identity=25.4794520547945, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24651635, Length=343, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24651633, Length=343, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 45467; Mature: 45467

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS01199 RIBOSOMAL_L1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMDIKHKPLKRELSLFGATMMGLGSIVGTGVFVSIGIAAGVTGPSVILAIALAALVATC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
NAFSSAQLAANHAVSGGTYEYGYRYLHPAFGFTAGWMFLCAKSASAATAALGFAGYFIHL
HCCHHHHHHHHHCCCCCCHHHCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEE
SGLETVPVIPIALAASITLILLVLSGLRRTNTVNIIIVMITLITLTVFIISGLPDFMQRG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
TANLRPFFPVSKQEGLSHFFYATALMFVAYTGYGRIATLAEEVKNPGKFIPAAIIITLMV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
SAALYILVGLVAIGAVGVEKLAQVTETNATPLESAARAIGIPGLSVLVSIGACTAMLGVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LNLILGLSRVALAMGRKGDLPKMFCYVSETRHVPVFAVIGVGVVIIALVLTGSVETTWTF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHH
SAFTVLIYYAITNLAALRLPKEEQLYPPLFAIGGLLSCLFLAFWVPIGVWITGISLLVLG
HHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLWKVVANRFL
HHHHHHHHHCC
>Mature Secondary Structure
MDMDIKHKPLKRELSLFGATMMGLGSIVGTGVFVSIGIAAGVTGPSVILAIALAALVATC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
NAFSSAQLAANHAVSGGTYEYGYRYLHPAFGFTAGWMFLCAKSASAATAALGFAGYFIHL
HCCHHHHHHHHHCCCCCCHHHCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEE
SGLETVPVIPIALAASITLILLVLSGLRRTNTVNIIIVMITLITLTVFIISGLPDFMQRG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
TANLRPFFPVSKQEGLSHFFYATALMFVAYTGYGRIATLAEEVKNPGKFIPAAIIITLMV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
SAALYILVGLVAIGAVGVEKLAQVTETNATPLESAARAIGIPGLSVLVSIGACTAMLGVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LNLILGLSRVALAMGRKGDLPKMFCYVSETRHVPVFAVIGVGVVIIALVLTGSVETTWTF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHH
SAFTVLIYYAITNLAALRLPKEEQLYPPLFAIGGLLSCLFLAFWVPIGVWITGISLLVLG
HHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLWKVVANRFL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]