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The map label for this gene is ybfF [C]

Identifier: 54297316

GI number: 54297316

Start: 1514924

End: 1516090

Strand: Direct

Name: ybfF [C]

Synonym: lpp1361

Alternate gene names: 54297316

Gene position: 1514924-1516090 (Clockwise)

Preceding gene: 54297314

Following gene: 54297318

Centisome position: 43.24

GC content: 36.68

Gene sequence:

>1167_bases
ATGCCCAAAGAAAAAGTCGTTATTATTATCCCTACCTATAATGAAGAAGATAATATTTCTAATACGATTGATTTGATTCT
TAAGGAGACTTACTCACTCGCGGATTATCAGGTTGACATTCTTGTATTTGATAGTCACTCCACAGATTCTACAGCCCATA
TAGTTCGAGAGCTAACTTATACCTCTCAACGTGTTCATTTTGCACAAGAACCACAGAAAACTGGGCTTGGTTCCGCTTAC
CTGCAAGCTATGAGAATTGCAATAAATGAGTTAAATGCAGATGTTGTATTTGAGTTTGATGCAGACGGTTCTCATCAACC
TTGTTATATTGCTCCAATGTTAGAGCTACTTAAACAGCATGATGTAGTTGTGGGGAGCCGATATATTTCAGGGGGAAGGA
TTCCCTCAAACTGGGCATTCCATCGTAAACTATTATCTGTGGGAGGTAATTGGGTTGCTCGTATGTTATTAACTGGAAAA
TATAAAGATCTTACTTCAGGTTTAAGGGCAATACGTACCAATCTGCTAAAGAAACTATTGCCTTCAAACTTCCTATCCAA
TAATTACGCGTATAAACTTGAGTTATACTGGCTTTTACACAAGGCAAAAGCCAGGATCGTTGAATTTCCTATTCAATTTA
TTGATAGAGAAAAAGGGAAAAGTAAATTACCTAAAAACAGTATGATTGACACCCTACGTGTTCTTTTTACCCTTCGCTTC
AGAGAGTTACGCCAGTACCTAACTATGTGCTGTGTTGGCTCCATCGGTGCATTGATTCAATTCAGCTTATACAATTGGTT
GCGCAGTTCGAACCATTCCGCTCTGGTATCCAGCCAAGTTGCTATCACTGCTGCTATTATATCCAATTTTATTTTTCACC
ATTCCATTACATTCAAACAAAAAACTGACTTCCGGGTAACTAAAACAACGTTTAGCCGTTTTACACAATTTATTATTTAT
TCCACATTTATGGTTTATTTTCAAAGCCTATGGGTTCATATTTTTGTCCATTCCTTTGGACAAGGTGTTTTGAAAGAAAA
TATCATTGTAGCCTCAGGCTTGGGCATTGGATCTATTATCAATTACCTGTTTTATTCAAATATTATTTGGTCATCAAAAG
GTGCTCATTCCCTCAATTCAAACTCTTCTAAAGAAACTCAAATTTGA

Upstream 100 bases:

>100_bases
CCTTACAATAGCAACTGTCACTTAAAGTTTGTTTACGGCAAGTCCACCATTTGATAAGATTTGCTTACTTCTAAAATCTG
CTTCTTATGATCTGATCAGT

Downstream 100 bases:

>100_bases
AAGCATAAGTGTAATGAGATTAGATAAACTAAACCCTCAATAAAAGCATTTTTTACAAAGAGATTAGCGGTATAAGTCCC
GTTTCATTTAAGTATCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPKEKVVIIIPTYNEEDNISNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTYTSQRVHFAQEPQKTGLGSAY
LQAMRIAINELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGK
YKDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAITAAIISNFIFHHSITFKQKTDFRVTKTTFSRFTQFIIY
STFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGAHSLNSNSSKETQI

Sequences:

>Translated_388_residues
MPKEKVVIIIPTYNEEDNISNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTYTSQRVHFAQEPQKTGLGSAY
LQAMRIAINELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGK
YKDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAITAAIISNFIFHHSITFKQKTDFRVTKTTFSRFTQFIIY
STFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGAHSLNSNSSKETQI
>Mature_387_residues
PKEKVVIIIPTYNEEDNISNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTYTSQRVHFAQEPQKTGLGSAYL
QAMRIAINELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKY
KDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRFR
ELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAITAAIISNFIFHHSITFKQKTDFRVTKTTFSRFTQFIIYS
TFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGAHSLNSNSSKETQI

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=242, Percent_Identity=31.8181818181818, Blast_Score=122, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI71999402, Length=238, Percent_Identity=34.453781512605, Blast_Score=125, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6325441, Length=231, Percent_Identity=25.5411255411255, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24585265, Length=238, Percent_Identity=31.9327731092437, Blast_Score=118, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 44281; Mature: 44149

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKEKVVIIIPTYNEEDNISNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTY
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHH
TSQRVHFAQEPQKTGLGSAYLQAMRIAINELNADVVFEFDADGSHQPCYIAPMLELLKQH
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHC
DVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKYKDLTSGLRAIRTNLLKKLL
CEEEECEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
CHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAITAAIISNFIFHHSITFKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEECC
KTDFRVTKTTFSRFTQFIIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSII
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHH
NYLFYSNIIWSSKGAHSLNSNSSKETQI
HHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKEKVVIIIPTYNEEDNISNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTY
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHH
TSQRVHFAQEPQKTGLGSAYLQAMRIAINELNADVVFEFDADGSHQPCYIAPMLELLKQH
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHHHHC
DVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKYKDLTSGLRAIRTNLLKKLL
CEEEECEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFTLRF
CHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAITAAIISNFIFHHSITFKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEECC
KTDFRVTKTTFSRFTQFIIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSII
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHHHHH
NYLFYSNIIWSSKGAHSLNSNSSKETQI
HHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]