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The map label for this gene is flgH

Identifier: 54297185

GI number: 54297185

Start: 1363953

End: 1364645

Strand: Direct

Name: flgH

Synonym: lpp1230

Alternate gene names: 54297185

Gene position: 1363953-1364645 (Clockwise)

Preceding gene: 54297184

Following gene: 54297186

Centisome position: 38.93

GC content: 40.84

Gene sequence:

>693_bases
ATGAATCGATTAAATATAGCTGTCTCTTGTTTAGCTACAGCTTTGTTGTTTGGGTGTGAAGCCTTACACCCACCGGCACC
AGGCGACAACCCTGATTATGCTCCAACTTATCCTGTAACTCCGGATCCCAAGGAATTAAGAAAGGTAAGTGGTGCTATTT
ATAGTAGTGAAACGGCTCTCCCTTTGTTTGAAACACCTAGGGCAAGGCATCCGGGTGATATATTAACAGTGTTTTTAATC
GAAAAAACTGATGCTCAGAAAAATGCGACTACCACTCAGAGAAAAAATGATACGACAAAAATCACAAATAAACTCTTTTT
GGGTAGACCCATCTCTTTGGGAAGTGGTTACAGCATGGATTTTGATTTGGATAACCAAAGGCAGTTTAACGGAGAAGGCA
GATCAATACAAAACAATAAATTGGCTGGCAGTATTTCAGTGACGGTAGCCAAAGTGTTGGCGAATGGCAATATGGTTGTT
CAAGGCGAGAAGTGGGTCAGAATTAACCAGGGGAATGAATTCGTTCGTCTTTCAGGGATAGTTCGTCCCCAGGATATAAA
AGCAGATAACACTATTACCTCAGATAGAATTGCCAATGCGAGAATTTCTTATGGTGGAACTGGTCAAATTAATAATACGA
ATGCTCAAGGATGGTTATCAAGGATTTTATGGGGGCCTTTATTCCCGACTTAA

Upstream 100 bases:

>100_bases
GATTCAGGCTCAAAGAAGTTATGAAATAACAGCAAAAAGCATTCAGACCGTTGACAGCATGTTGCAATATTTAACCCAAA
CTCTGTAAGTGAGATAGGTT

Downstream 100 bases:

>100_bases
TTGGTAATTATCGAGATTATTAACGACAAGGAATTAAGATGCGGCGAATACTGGTTATTCGATGGATATTGGCAATTCAC
TTGATTGCAACCCAAGTTTT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNRLNIAVSCLATALLFGCEALHPPAPGDNPDYAPTYPVTPDPKELRKVSGAIYSSETALPLFETPRARHPGDILTVFLI
EKTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVV
QGEKWVRINQGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFPT

Sequences:

>Translated_230_residues
MNRLNIAVSCLATALLFGCEALHPPAPGDNPDYAPTYPVTPDPKELRKVSGAIYSSETALPLFETPRARHPGDILTVFLI
EKTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVV
QGEKWVRINQGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFPT
>Mature_230_residues
MNRLNIAVSCLATALLFGCEALHPPAPGDNPDYAPTYPVTPDPKELRKVSGAIYSSETALPLFETPRARHPGDILTVFLI
EKTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVV
QGEKWVRINQGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFPT

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=222, Percent_Identity=33.7837837837838, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_LEGPA (Q5X5U0)

Other databases:

- EMBL:   CR628336
- RefSeq:   YP_123554.1
- STRING:   Q5X5U0
- GeneID:   3119442
- GenomeReviews:   CR628336_GR
- KEGG:   lpp:lpp1230
- LegioList:   lpp1230
- eggNOG:   COG2063
- HOGENOM:   HBG507455
- OMA:   CESQAIL
- ProtClustDB:   PRK12701
- BioCyc:   LPNE297246:LPP1230-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 25128; Mature: 25128

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLNIAVSCLATALLFGCEALHPPAPGDNPDYAPTYPVTPDPKELRKVSGAIYSSETAL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCC
PLFETPRARHPGDILTVFLIEKTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMD
CEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHEEEECCCEECCCCCEEE
FDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEKWVRINQGNEFVRLSGI
CCCCCCEEECCCCCCCCCCCCCCHHHHEEEHHHHCCCEEEECCEEEEECCCCCEEEEECC
VRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFPT
CCCCCCCCCCCCCCCHHCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRLNIAVSCLATALLFGCEALHPPAPGDNPDYAPTYPVTPDPKELRKVSGAIYSSETAL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCC
PLFETPRARHPGDILTVFLIEKTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMD
CEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHEEEECCCEECCCCCEEE
FDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQGEKWVRINQGNEFVRLSGI
CCCCCCEEECCCCCCCCCCCCCCHHHHEEEHHHHCCCEEEECCEEEEECCCCCEEEEECC
VRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRILWGPLFPT
CCCCCCCCCCCCCCCHHCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA