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The map label for this gene is bepC [H]

Identifier: 54296848

GI number: 54296848

Start: 998233

End: 999957

Strand: Direct

Name: bepC [H]

Synonym: lpp0889

Alternate gene names: 54296848

Gene position: 998233-999957 (Clockwise)

Preceding gene: 54296843

Following gene: 54296849

Centisome position: 28.49

GC content: 41.16

Gene sequence:

>1725_bases
ATGAGAAAGGCGCTGTTGGTAATTGCAATGCTTACTTCTTCCTACGTTGCTGCAGATACTCTTTATGAAGCAGTACAATA
TGGCATGATCGCTAACCCGGATATACTACTTAATACTGCAAAAGGTTTGTCAGCGAAACAGGCAATTGATAAAGCAAAGG
GTGGTTTATATCCTTCTATCGATGTAACTGGTGGGTTTGGACGACAAAGGAGTGTTAACCCGACATCTGCAGCGATCGAT
GATACTCCCAGTACTACTCTCAATATAGTGGAATCGGCCGTGGAGTTAAGGCAGAGATTGTTTGCTGGTGGAGGGATAAT
TAATGAAGTGAAGCGAAACCAATACCTTACTGAGGCGCAAAAGTGGAAAACACAGGGTATTGCTGAAGATTTGGCATTGG
AAATTACCAAAAATTATTTCGCTGTATTACTGCATGAACGTTTGTATGCTTACTCCATCGAAAATCTTAAAGCACATAAA
GCGGTTTTTAAGATGATAAAAGAACGGGCTACCGCCGGGATTACCAGAACGGCAGAAGTCGATCAGGCTAATGCAAGACT
GGCTCTTGCCGAGGCTAATAAAATAAGTGCATTGGCTGATTTGCAAGAGGTGAAGATCAATTATGCAAAAACAGTAGGTA
AATGGCCAGAGAATCTCCAAGTGCCTCATGTTCCAGCAAGAAAAAGTTTGCCTAATAATTTAGCCAGGATTATAGAAAAA
GGATTAGATAATCACCCAACAGTGAAATCAAGTTACGCTGATATTAAAGAAGCAAAGGCTCAGTACGATGTCGCCAGAGC
AGCCTATTACCCTGAGGTTAATCTGGTTTTGAATAGCTCAAAAAACAAGAACTTGGGTGGTCTGATAGGTCCTAATGACT
CCGACACGGTGGCTGTAAGAATGAATTACAATGCATTTCGTGGTGGTGCTGATGCCGCTCGTATACGAGAAACAGCTTAT
CAAGTCCAGGAAGCTTATGAAACAAAAAATCGCACATTGCTGGAATTAAAAGAGACTATCAGGTTAGCCTGGAATGCTTA
TGTTGCCTCTGCCTTGCGCATTCAACCATTGAAGCAACACGTTACCGCTTCGAGAAAAACACGTACGGCCTATCAAGATG
AATTTAAGGTGGGTAAAAGGACGCTCCTTGATTTACTCGATTCTCAAAATGAATATTATGAATCACAAATTGAATTGGCC
CGCGCGGAAAATGACGAGATACTTTCCCGCTATCGAATCCTGAATGGAATGGGTTGTTTATTAAAACATTTGAATTTGAG
GTTGCCGGTAAATGTGGTGAATAATGATGTATTCTCGTCGGCTCAGACCAATATTTTATTGAACAGGAAAATGGATGAGA
TCCCTTATCCCAATAATACGGATAATCCTATGGTTCTCACTCATCCTGTTAAGAACATGGAGAAAACTCGTTTAACTAAA
TCGATGGTAGACAAAAACACTACTTATCCTCAGCAAATAACGCCCAAGTTATGGTATATCTCAGCAGGCTCTTTCAGAGA
TAAAAATAATGCCGTAGCTTTGGTTAAACGGTTAAATGGATTAGGCTTTACTGCCTTCATGAGCCCTTATAAAGATCTTC
TGTCCGTTTTTGTTGGTCCTTATGAATACAGAGGTCATGCGGGTAATGGAATGGAAAGGCTAAAGGAATTGGCTCATGTT
GAAGGAGTCCTGGTTACTTTCAAAGAGCCGCCCAAGAAGGCTTAG

Upstream 100 bases:

>100_bases
TTAAAGAAATAAAATTATATTGTAGTGAGATGTTATTTCATTTAAGGTTATACGTTACTATATAGATAATTAACAAAATA
ACAATAATAAGGAATGAGGA

Downstream 100 bases:

>100_bases
TGTTATAGCTAAGAGATTTCAGAAGGTTTTTTTGGAATCTCTTCGTTATAGATTGGTTTTATCCATTTGGACTGGTTTGA
TACTTTGCTATGTAACAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MRKALLVIAMLTSSYVAADTLYEAVQYGMIANPDILLNTAKGLSAKQAIDKAKGGLYPSIDVTGGFGRQRSVNPTSAAID
DTPSTTLNIVESAVELRQRLFAGGGIINEVKRNQYLTEAQKWKTQGIAEDLALEITKNYFAVLLHERLYAYSIENLKAHK
AVFKMIKERATAGITRTAEVDQANARLALAEANKISALADLQEVKINYAKTVGKWPENLQVPHVPARKSLPNNLARIIEK
GLDNHPTVKSSYADIKEAKAQYDVARAAYYPEVNLVLNSSKNKNLGGLIGPNDSDTVAVRMNYNAFRGGADAARIRETAY
QVQEAYETKNRTLLELKETIRLAWNAYVASALRIQPLKQHVTASRKTRTAYQDEFKVGKRTLLDLLDSQNEYYESQIELA
RAENDEILSRYRILNGMGCLLKHLNLRLPVNVVNNDVFSSAQTNILLNRKMDEIPYPNNTDNPMVLTHPVKNMEKTRLTK
SMVDKNTTYPQQITPKLWYISAGSFRDKNNAVALVKRLNGLGFTAFMSPYKDLLSVFVGPYEYRGHAGNGMERLKELAHV
EGVLVTFKEPPKKA

Sequences:

>Translated_574_residues
MRKALLVIAMLTSSYVAADTLYEAVQYGMIANPDILLNTAKGLSAKQAIDKAKGGLYPSIDVTGGFGRQRSVNPTSAAID
DTPSTTLNIVESAVELRQRLFAGGGIINEVKRNQYLTEAQKWKTQGIAEDLALEITKNYFAVLLHERLYAYSIENLKAHK
AVFKMIKERATAGITRTAEVDQANARLALAEANKISALADLQEVKINYAKTVGKWPENLQVPHVPARKSLPNNLARIIEK
GLDNHPTVKSSYADIKEAKAQYDVARAAYYPEVNLVLNSSKNKNLGGLIGPNDSDTVAVRMNYNAFRGGADAARIRETAY
QVQEAYETKNRTLLELKETIRLAWNAYVASALRIQPLKQHVTASRKTRTAYQDEFKVGKRTLLDLLDSQNEYYESQIELA
RAENDEILSRYRILNGMGCLLKHLNLRLPVNVVNNDVFSSAQTNILLNRKMDEIPYPNNTDNPMVLTHPVKNMEKTRLTK
SMVDKNTTYPQQITPKLWYISAGSFRDKNNAVALVKRLNGLGFTAFMSPYKDLLSVFVGPYEYRGHAGNGMERLKELAHV
EGVLVTFKEPPKKA
>Mature_574_residues
MRKALLVIAMLTSSYVAADTLYEAVQYGMIANPDILLNTAKGLSAKQAIDKAKGGLYPSIDVTGGFGRQRSVNPTSAAID
DTPSTTLNIVESAVELRQRLFAGGGIINEVKRNQYLTEAQKWKTQGIAEDLALEITKNYFAVLLHERLYAYSIENLKAHK
AVFKMIKERATAGITRTAEVDQANARLALAEANKISALADLQEVKINYAKTVGKWPENLQVPHVPARKSLPNNLARIIEK
GLDNHPTVKSSYADIKEAKAQYDVARAAYYPEVNLVLNSSKNKNLGGLIGPNDSDTVAVRMNYNAFRGGADAARIRETAY
QVQEAYETKNRTLLELKETIRLAWNAYVASALRIQPLKQHVTASRKTRTAYQDEFKVGKRTLLDLLDSQNEYYESQIELA
RAENDEILSRYRILNGMGCLLKHLNLRLPVNVVNNDVFSSAQTNILLNRKMDEIPYPNNTDNPMVLTHPVKNMEKTRLTK
SMVDKNTTYPQQITPKLWYISAGSFRDKNNAVALVKRLNGLGFTAFMSPYKDLLSVFVGPYEYRGHAGNGMERLKELAHV
EGVLVTFKEPPKKA

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 64084; Mature: 64084

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKALLVIAMLTSSYVAADTLYEAVQYGMIANPDILLNTAKGLSAKQAIDKAKGGLYPSI
CCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCE
DVTGGFGRQRSVNPTSAAIDDTPSTTLNIVESAVELRQRLFAGGGIINEVKRNQYLTEAQ
ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KWKTQGIAEDLALEITKNYFAVLLHERLYAYSIENLKAHKAVFKMIKERATAGITRTAEV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DQANARLALAEANKISALADLQEVKINYAKTVGKWPENLQVPHVPARKSLPNNLARIIEK
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHH
GLDNHPTVKSSYADIKEAKAQYDVARAAYYPEVNLVLNSSKNKNLGGLIGPNDSDTVAVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE
MNYNAFRGGADAARIRETAYQVQEAYETKNRTLLELKETIRLAWNAYVASALRIQPLKQH
ECCCHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTASRKTRTAYQDEFKVGKRTLLDLLDSQNEYYESQIELARAENDEILSRYRILNGMGCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LKHLNLRLPVNVVNNDVFSSAQTNILLNRKMDEIPYPNNTDNPMVLTHPVKNMEKTRLTK
HHHCCCCCEEEECCCHHHHCCCCCEEEECCHHCCCCCCCCCCCEEEECCHHHHHHHHHHH
SMVDKNTTYPQQITPKLWYISAGSFRDKNNAVALVKRLNGLGFTAFMSPYKDLLSVFVGP
HHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
YEYRGHAGNGMERLKELAHVEGVLVTFKEPPKKA
HHCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCC
>Mature Secondary Structure
MRKALLVIAMLTSSYVAADTLYEAVQYGMIANPDILLNTAKGLSAKQAIDKAKGGLYPSI
CCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCE
DVTGGFGRQRSVNPTSAAIDDTPSTTLNIVESAVELRQRLFAGGGIINEVKRNQYLTEAQ
ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KWKTQGIAEDLALEITKNYFAVLLHERLYAYSIENLKAHKAVFKMIKERATAGITRTAEV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DQANARLALAEANKISALADLQEVKINYAKTVGKWPENLQVPHVPARKSLPNNLARIIEK
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHHHHH
GLDNHPTVKSSYADIKEAKAQYDVARAAYYPEVNLVLNSSKNKNLGGLIGPNDSDTVAVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE
MNYNAFRGGADAARIRETAYQVQEAYETKNRTLLELKETIRLAWNAYVASALRIQPLKQH
ECCCHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTASRKTRTAYQDEFKVGKRTLLDLLDSQNEYYESQIELARAENDEILSRYRILNGMGCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LKHLNLRLPVNVVNNDVFSSAQTNILLNRKMDEIPYPNNTDNPMVLTHPVKNMEKTRLTK
HHHCCCCCEEEECCCHHHHCCCCCEEEECCHHCCCCCCCCCCCEEEECCHHHHHHHHHHH
SMVDKNTTYPQQITPKLWYISAGSFRDKNNAVALVKRLNGLGFTAFMSPYKDLLSVFVGP
HHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
YEYRGHAGNGMERLKELAHVEGVLVTFKEPPKKA
HHCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]