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The map label for this gene is mce6E [C]

Identifier: 54027601

GI number: 54027601

Start: 5967226

End: 5968329

Strand: Reverse

Name: mce6E [C]

Synonym: nfa56270

Alternate gene names: 54027601

Gene position: 5968329-5967226 (Counterclockwise)

Preceding gene: 54027602

Following gene: 54027600

Centisome position: 99.12

GC content: 67.75

Gene sequence:

>1104_bases
ATGACGAACCGCATGAGGATCAAGGCACGCCGGGCGCTGATCGCCCTGGCCGCGGTGACCGCCGTCGGCACCACCTCCGG
GTGTGGCCTCACCGTCGAGGACCTGCCGCTGCCCAAGCCCGGGCAGGCCGCGGAGACCTACACGCTGCACGCGGTCTTCG
AGAACGCGCTGAACCTGCCCGATCAGGCGAAGGTGAAGATCGGCGGTTCGGACGTCGGTGTGGTCACCAACATCACCACC
AAGAACTTCCAGGCCGTGGTCGACCTGAGCATCGACAAGAACATCGAGTTGCCGCGGGGCAGCACCGCCGAGTTGCGGCA
GGCGACCCCGCTGGGCGATGTGTTCATCGCGGTGTCCAAGCCCAAGGCCGAGCCGGGTGCGGCGATGTTGCAGGACGGCG
ACACCCTGACGCTCGAGCAGACCTCGGCGGGCGCCACCGTCGAACAGCTGCTGATCTCGGTGTCGATGCTGTTCAACGGC
GGCGGCGTGGCCGCGCTGAGCAAGCTCGGCTCCGAACTGGACGCCATCGTCGGCGGTCGCGGCCCGCAGCTGGCGCACCT
GATCACCGAGCTGACCGGCGTGGTGGGCAGCCTCAACGAGAACTCCCAGCGGGTCGACGCGGTGCTCGGCGAATTCCACA
CCCTCGCGAACACCATCGAGAGCAAGCGCGGTGAACTCGGCGAGGTGGCCGACACGCTGCCGCAGATGATCGGCGCGGTC
GCCGAGAACAACCGCGCCATCGGCGACATGCTCACCAAACTCTCCACCGCCAGCGCGGCCATCGGCGACTACTCCAACAC
CTCGAGCGAACAGCTGCAGAGCCTGCTGGAGAACACCCATCAGCTGATGAACGCCCTCGCCGCCACCGGCAGCGATTTCG
AGGTGCTGCTCGACCGGCTGCACGAGATCCGGCCCAAGGTGGACAACACCTTCCGCGGCCGCAGCTTCGCCGTGTACGCG
ACCGCGACCAACCTCGACATCAGCGCGCTCACCGATCCGGCCAACGCCGGCCTGTGGGACCTGCACGACCTGCAGGACTT
CGCGGGCAGCCTCATCCAGGTGCTGCAACTGGTGCAGAACCGGGTGGAGGGGGGCCACCGATGA

Upstream 100 bases:

>100_bases
GCGAGCGGATCCAGATGCGCGCCGACGGCTGCCGAACCGGGAACATGCAGGACTTCGGGCCCGACTACGGGTTGACCGCC
GCACTGCTCGGACTGACGAA

Downstream 100 bases:

>100_bases
AGAAGCTCTCGCGCAAGCAGCTGCTGTCGGCGCTCGGTCTGGTGTTGGTGCTGGTGGTCGGTGCGAGCTACCTGCTGGTG
TACGTGATGCGGGTGAATCC

Product: putative Mce family protein

Products: NA

Alternate protein names: Mce Family Protein; MCE Family Protein; Secreted Protein; Mammalian Cell Entry Related Domain Protein; Mce Family Lipoe; MCE Family Lipoprotein LprM; Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; MCE Family Lipoprotein LprN; MCE-Family Protein; Mce Family B; Mammalian Cell Entry-Like Domain-Containing Protein; MCE Family LipoE; Mce Family Protein Mce5E; MCE-Family Lipoprotein LprL; MCE Family Lipoprotein; MCE Family Lipoprotein LprK; Mce-Related Protein; LprM Protein; MCE-Family Protein LprN; Fis Family Transcriptional Regulator; Lipoprotein

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTNRMRIKARRALIALAAVTAVGTTSGCGLTVEDLPLPKPGQAAETYTLHAVFENALNLPDQAKVKIGGSDVGVVTNITT
KNFQAVVDLSIDKNIELPRGSTAELRQATPLGDVFIAVSKPKAEPGAAMLQDGDTLTLEQTSAGATVEQLLISVSMLFNG
GGVAALSKLGSELDAIVGGRGPQLAHLITELTGVVGSLNENSQRVDAVLGEFHTLANTIESKRGELGEVADTLPQMIGAV
AENNRAIGDMLTKLSTASAAIGDYSNTSSEQLQSLLENTHQLMNALAATGSDFEVLLDRLHEIRPKVDNTFRGRSFAVYA
TATNLDISALTDPANAGLWDLHDLQDFAGSLIQVLQLVQNRVEGGHR

Sequences:

>Translated_367_residues
MTNRMRIKARRALIALAAVTAVGTTSGCGLTVEDLPLPKPGQAAETYTLHAVFENALNLPDQAKVKIGGSDVGVVTNITT
KNFQAVVDLSIDKNIELPRGSTAELRQATPLGDVFIAVSKPKAEPGAAMLQDGDTLTLEQTSAGATVEQLLISVSMLFNG
GGVAALSKLGSELDAIVGGRGPQLAHLITELTGVVGSLNENSQRVDAVLGEFHTLANTIESKRGELGEVADTLPQMIGAV
AENNRAIGDMLTKLSTASAAIGDYSNTSSEQLQSLLENTHQLMNALAATGSDFEVLLDRLHEIRPKVDNTFRGRSFAVYA
TATNLDISALTDPANAGLWDLHDLQDFAGSLIQVLQLVQNRVEGGHR
>Mature_366_residues
TNRMRIKARRALIALAAVTAVGTTSGCGLTVEDLPLPKPGQAAETYTLHAVFENALNLPDQAKVKIGGSDVGVVTNITTK
NFQAVVDLSIDKNIELPRGSTAELRQATPLGDVFIAVSKPKAEPGAAMLQDGDTLTLEQTSAGATVEQLLISVSMLFNGG
GVAALSKLGSELDAIVGGRGPQLAHLITELTGVVGSLNENSQRVDAVLGEFHTLANTIESKRGELGEVADTLPQMIGAVA
ENNRAIGDMLTKLSTASAAIGDYSNTSSEQLQSLLENTHQLMNALAATGSDFEVLLDRLHEIRPKVDNTFRGRSFAVYAT
ATNLDISALTDPANAGLWDLHDLQDFAGSLIQVLQLVQNRVEGGHR

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38670; Mature: 38539

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRMRIKARRALIALAAVTAVGTTSGCGLTVEDLPLPKPGQAAETYTLHAVFENALNLP
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCC
DQAKVKIGGSDVGVVTNITTKNFQAVVDLSIDKNIELPRGSTAELRQATPLGDVFIAVSK
CCCEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEEEEC
PKAEPGAAMLQDGDTLTLEQTSAGATVEQLLISVSMLFNGGGVAALSKLGSELDAIVGGR
CCCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
GPQLAHLITELTGVVGSLNENSQRVDAVLGEFHTLANTIESKRGELGEVADTLPQMIGAV
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AENNRAIGDMLTKLSTASAAIGDYSNTSSEQLQSLLENTHQLMNALAATGSDFEVLLDRL
HHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
HEIRPKVDNTFRGRSFAVYATATNLDISALTDPANAGLWDLHDLQDFAGSLIQVLQLVQN
HHHCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RVEGGHR
HHCCCCC
>Mature Secondary Structure 
TNRMRIKARRALIALAAVTAVGTTSGCGLTVEDLPLPKPGQAAETYTLHAVFENALNLP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCC
DQAKVKIGGSDVGVVTNITTKNFQAVVDLSIDKNIELPRGSTAELRQATPLGDVFIAVSK
CCCEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEEEEC
PKAEPGAAMLQDGDTLTLEQTSAGATVEQLLISVSMLFNGGGVAALSKLGSELDAIVGGR
CCCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
GPQLAHLITELTGVVGSLNENSQRVDAVLGEFHTLANTIESKRGELGEVADTLPQMIGAV
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AENNRAIGDMLTKLSTASAAIGDYSNTSSEQLQSLLENTHQLMNALAATGSDFEVLLDRL
HHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
HEIRPKVDNTFRGRSFAVYATATNLDISALTDPANAGLWDLHDLQDFAGSLIQVLQLVQN
HHHCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RVEGGHR
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA