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The map label for this gene is 54027580

Identifier: 54027580

GI number: 54027580

Start: 5944688

End: 5945671

Strand: Reverse

Name: 54027580

Synonym: nfa56060

Alternate gene names: NA

Gene position: 5945671-5944688 (Counterclockwise)

Preceding gene: 54027581

Following gene: 54027579

Centisome position: 98.75

GC content: 74.49

Gene sequence:

>984_bases
GTGTCCGCGGCCCGCCGCGCGCCGGGCGCGCACAATGGACCGGTGCGCGAACCGATGGCAACAGCGACCGACCGCGGGCG
GGTCAGGACGCTCACCGCGGCGCGGCCCGTCGACCTCGCGCACACCCTCGCTCCGCTGCGGCGCGGACCGGGCGATCCCT
GCCGGCATCGTGACGCGGCGGGCGGGCACTGGCACGCCTCCCGATTGCGCAGCGGTGCGGTGACCTACCGCCTGGTGCAG
GGCGACACCCACACCGTGCACGCGACCGCTTGGGGGCCGGGCGCCGAGGAATTCCTCGACGACCTGCCCCGGATGCTCTG
CCTGGACGAGGACCTCAGCGGCTTCGCACCCGAGCACCCGCTGGTCCGGGACGCGCACCGGCGCTTCCCCGGCCTGCGGA
TGCTGCGCACCGGGCGGGTGTTCGAGGCGCTGGTGCCCGCGGTGCTCGAACAGAAGGTGCACACCCGTTCGGCGCGCATG
TCGTGGCGAAAGTTGGTGTGCCGCTACGGCGAACCGGCACCGGGCCCCGCGCCCGCCGGCCTGCTGCTGCCCCCCGACGC
GGACACCTGGCGCCGGGTGCCGTCCTGGGTGTTCCACCGCGCCAACGTCGGACCGCAGCGCGCGCAGACCATCGTGCGCG
CGGCCGCGGTGGCCGACGCGCTGGAGCGCACCGCGGCCGCGGACCCGGCCGAGGCCGCGCGCCTGCTGCAGACGATCCCC
GGCATCGGCGTGTGGACCGCCGCCGAGATCGCCCAGCGCGCCTTCGGCGACGCCGACGCTCTCTCGGTCGGCGATTACCA
CCTGGCCGCGATCATCGGCTGGACGTTGCTCGGTCGCCCCCTCGACGACGACGGCATGGTCGAGTATCTGGAACCGCTAC
GGCCGCACCGTTATCGGGTGGTGCGATTGCTGGAGGTGAGCGGGCACGCCAGGAAGCCGAAGTTCGGGCCGCGCACGCCG
CTCACCGATCACAGCTGGCACTGA

Upstream 100 bases:

>100_bases
CGAATGCCAGCTGTTTGCCGATCGCTCGGTTATCGACCTCACCGGAACGCTCGTTACGCAACGGTGATCTATATCCGTCA
TATCGAACGGCTATGGCGGG

Downstream 100 bases:

>100_bases
GGCGCTGAGTTCAACCGGCGCCGAGACGCTGAGTTCAACCGGCGCCGAGACGCTGGGCTCAACCGGCGCCGAGACGCTGG
GCTCACCCGGCGCCGGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSAARRAPGAHNGPVREPMATATDRGRVRTLTAARPVDLAHTLAPLRRGPGDPCRHRDAAGGHWHASRLRSGAVTYRLVQ
GDTHTVHATAWGPGAEEFLDDLPRMLCLDEDLSGFAPEHPLVRDAHRRFPGLRMLRTGRVFEALVPAVLEQKVHTRSARM
SWRKLVCRYGEPAPGPAPAGLLLPPDADTWRRVPSWVFHRANVGPQRAQTIVRAAAVADALERTAAADPAEAARLLQTIP
GIGVWTAAEIAQRAFGDADALSVGDYHLAAIIGWTLLGRPLDDDGMVEYLEPLRPHRYRVVRLLEVSGHARKPKFGPRTP
LTDHSWH

Sequences:

>Translated_327_residues
MSAARRAPGAHNGPVREPMATATDRGRVRTLTAARPVDLAHTLAPLRRGPGDPCRHRDAAGGHWHASRLRSGAVTYRLVQ
GDTHTVHATAWGPGAEEFLDDLPRMLCLDEDLSGFAPEHPLVRDAHRRFPGLRMLRTGRVFEALVPAVLEQKVHTRSARM
SWRKLVCRYGEPAPGPAPAGLLLPPDADTWRRVPSWVFHRANVGPQRAQTIVRAAAVADALERTAAADPAEAARLLQTIP
GIGVWTAAEIAQRAFGDADALSVGDYHLAAIIGWTLLGRPLDDDGMVEYLEPLRPHRYRVVRLLEVSGHARKPKFGPRTP
LTDHSWH
>Mature_326_residues
SAARRAPGAHNGPVREPMATATDRGRVRTLTAARPVDLAHTLAPLRRGPGDPCRHRDAAGGHWHASRLRSGAVTYRLVQG
DTHTVHATAWGPGAEEFLDDLPRMLCLDEDLSGFAPEHPLVRDAHRRFPGLRMLRTGRVFEALVPAVLEQKVHTRSARMS
WRKLVCRYGEPAPGPAPAGLLLPPDADTWRRVPSWVFHRANVGPQRAQTIVRAAAVADALERTAAADPAEAARLLQTIPG
IGVWTAAEIAQRAFGDADALSVGDYHLAAIIGWTLLGRPLDDDGMVEYLEPLRPHRYRVVRLLEVSGHARKPKFGPRTPL
TDHSWH

Specific function: Unknown

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35880; Mature: 35749

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAARRAPGAHNGPVREPMATATDRGRVRTLTAARPVDLAHTLAPLRRGPGDPCRHRDAA
CCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHCCCCC
GGHWHASRLRSGAVTYRLVQGDTHTVHATAWGPGAEEFLDDLPRMLCLDEDLSGFAPEHP
CCCHHHHHHHCCCEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
LVRDAHRRFPGLRMLRTGRVFEALVPAVLEQKVHTRSARMSWRKLVCRYGEPAPGPAPAG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LLLPPDADTWRRVPSWVFHRANVGPQRAQTIVRAAAVADALERTAAADPAEAARLLQTIP
CEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
GIGVWTAAEIAQRAFGDADALSVGDYHLAAIIGWTLLGRPLDDDGMVEYLEPLRPHRYRV
CCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHH
VRLLEVSGHARKPKFGPRTPLTDHSWH
HHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAARRAPGAHNGPVREPMATATDRGRVRTLTAARPVDLAHTLAPLRRGPGDPCRHRDAA
CCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHCCCCC
GGHWHASRLRSGAVTYRLVQGDTHTVHATAWGPGAEEFLDDLPRMLCLDEDLSGFAPEHP
CCCHHHHHHHCCCEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
LVRDAHRRFPGLRMLRTGRVFEALVPAVLEQKVHTRSARMSWRKLVCRYGEPAPGPAPAG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LLLPPDADTWRRVPSWVFHRANVGPQRAQTIVRAAAVADALERTAAADPAEAARLLQTIP
CEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
GIGVWTAAEIAQRAFGDADALSVGDYHLAAIIGWTLLGRPLDDDGMVEYLEPLRPHRYRV
CCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHH
VRLLEVSGHARKPKFGPRTPLTDHSWH
HHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA