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The map label for this gene is 54027579

Identifier: 54027579

GI number: 54027579

Start: 5942972

End: 5943901

Strand: Reverse

Name: 54027579

Synonym: nfa56050

Alternate gene names: NA

Gene position: 5943901-5942972 (Counterclockwise)

Preceding gene: 54027580

Following gene: 54027578

Centisome position: 98.72

GC content: 72.58

Gene sequence:

>930_bases
GTGAAACCGGCCCGCGCGGCCGGGACGGCTACCGCCGCGGGCGCGGGTCCGGCGGTCGCCCGGCGGCAGCTGGGCCGCTA
TCTGCGCGACTGGCGCACCCAGGCCGGTCTCACCATCGCCGAGGCGGCGCGGCTGATGGAATGGGGCGCGAGCACCTTGC
AGCGCCTGGAGAAGGGGCAGGCCGACCGGATCCGCAGCCTGGACATCCAGGAACTCTGTCGCATCTACGGCATTCCGGAC
GACCTGCGGGATGCGCTCACCGGCCTGGCCCAGCAGAGCACCGGCCCGAGCTGGTGGCACGCGCACGGCGAGGTGATCCC
GGAGGACTTCGACCTCTATCCGGGCATCGAGGCGATCGCGGCCGAGTTGTCTTGCTACCAGCCAGAACTCGTGCCACCCC
TGCTGCAGACGCCGGATTACGCCCGGGCGCTGCTGCGGCTCGCCCGGCCCTCCGCCGACGACGTCGAACTCGACCACCGT
GTCCAGGTGCGCGTGCAACGCCAGGCCGTACTGACCAGGAAGTCGCCGGCCCGGCTCACGGCCGTGGTCCACGAAGCGGT
GCTGCGCCGCATCGTCGGCTGCCCCAAAGTGATGGCCGCACAGCTGCGTCAACTCGCCGACACCAGTACGCGTCCGAACG
TGACCGTGCTGGTGCTGCCGTTCGCCGCGGGCCTGCCCGTGGGCGAGCAGACCGGCGCGTTCACCGTGCTCCGCTTCGGT
GCGGGCGCGGGGCGCGCCGTCGAGCCACCGTTGGTGCACGTCGCCGGCTTCACCGGGGACCTGTATCTGGAGCGGCCGCA
GGACGTGGCCCGCTTCGAGGCCGCCCACGACTGCCTGCGGCACTACGCGCTGGACGCGCAGGCCAGCAGGCGCATGCTGC
GGCAGGCGGCCAAGGAGTACGCCGCCCAGGCCGGGCACATCGGCAGGTGA

Upstream 100 bases:

>100_bases
GCGGCGAATGAGCGTGCGGGTTCGCCCGGCTCGCCCCTCCCGCCGGGGAGGAGCACAGAACGGAGCGATGACGTTGGCAC
CGAGTTCCACACGCACAGCA

Downstream 100 bases:

>100_bases
GGGCGCGAAACGCCGGGGCGAAGATCACGAATGGACGCACATTCGGCAACGAAACGGGGTTTATGTCCGGACCGCCTCGG
GTAACCGGAATACATGGACC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family; Transcriptional Regulatory Protein; Regulatory Protein; Transcriptional Regulator; Helix-Turn-Helix Protein

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKPARAAGTATAAGAGPAVARRQLGRYLRDWRTQAGLTIAEAARLMEWGASTLQRLEKGQADRIRSLDIQELCRIYGIPD
DLRDALTGLAQQSTGPSWWHAHGEVIPEDFDLYPGIEAIAAELSCYQPELVPPLLQTPDYARALLRLARPSADDVELDHR
VQVRVQRQAVLTRKSPARLTAVVHEAVLRRIVGCPKVMAAQLRQLADTSTRPNVTVLVLPFAAGLPVGEQTGAFTVLRFG
AGAGRAVEPPLVHVAGFTGDLYLERPQDVARFEAAHDCLRHYALDAQASRRMLRQAAKEYAAQAGHIGR

Sequences:

>Translated_309_residues
MKPARAAGTATAAGAGPAVARRQLGRYLRDWRTQAGLTIAEAARLMEWGASTLQRLEKGQADRIRSLDIQELCRIYGIPD
DLRDALTGLAQQSTGPSWWHAHGEVIPEDFDLYPGIEAIAAELSCYQPELVPPLLQTPDYARALLRLARPSADDVELDHR
VQVRVQRQAVLTRKSPARLTAVVHEAVLRRIVGCPKVMAAQLRQLADTSTRPNVTVLVLPFAAGLPVGEQTGAFTVLRFG
AGAGRAVEPPLVHVAGFTGDLYLERPQDVARFEAAHDCLRHYALDAQASRRMLRQAAKEYAAQAGHIGR
>Mature_309_residues
MKPARAAGTATAAGAGPAVARRQLGRYLRDWRTQAGLTIAEAARLMEWGASTLQRLEKGQADRIRSLDIQELCRIYGIPD
DLRDALTGLAQQSTGPSWWHAHGEVIPEDFDLYPGIEAIAAELSCYQPELVPPLLQTPDYARALLRLARPSADDVELDHR
VQVRVQRQAVLTRKSPARLTAVVHEAVLRRIVGCPKVMAAQLRQLADTSTRPNVTVLVLPFAAGLPVGEQTGAFTVLRFG
AGAGRAVEPPLVHVAGFTGDLYLERPQDVARFEAAHDCLRHYALDAQASRRMLRQAAKEYAAQAGHIGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33738; Mature: 33738

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPARAAGTATAAGAGPAVARRQLGRYLRDWRTQAGLTIAEAARLMEWGASTLQRLEKGQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
ADRIRSLDIQELCRIYGIPDDLRDALTGLAQQSTGPSWWHAHGEVIPEDFDLYPGIEAIA
HHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
AELSCYQPELVPPLLQTPDYARALLRLARPSADDVELDHRVQVRVQRQAVLTRKSPARLT
HHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
AVVHEAVLRRIVGCPKVMAAQLRQLADTSTRPNVTVLVLPFAAGLPVGEQTGAFTVLRFG
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEC
AGAGRAVEPPLVHVAGFTGDLYLERPQDVARFEAAHDCLRHYALDAQASRRMLRQAAKEY
CCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AAQAGHIGR
HHHCCCCCC
>Mature Secondary Structure
MKPARAAGTATAAGAGPAVARRQLGRYLRDWRTQAGLTIAEAARLMEWGASTLQRLEKGQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
ADRIRSLDIQELCRIYGIPDDLRDALTGLAQQSTGPSWWHAHGEVIPEDFDLYPGIEAIA
HHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
AELSCYQPELVPPLLQTPDYARALLRLARPSADDVELDHRVQVRVQRQAVLTRKSPARLT
HHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
AVVHEAVLRRIVGCPKVMAAQLRQLADTSTRPNVTVLVLPFAAGLPVGEQTGAFTVLRFG
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEC
AGAGRAVEPPLVHVAGFTGDLYLERPQDVARFEAAHDCLRHYALDAQASRRMLRQAAKEY
CCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AAQAGHIGR
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA