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The map label for this gene is 54027556

Identifier: 54027556

GI number: 54027556

Start: 5919005

End: 5919643

Strand: Reverse

Name: 54027556

Synonym: nfa55820

Alternate gene names: NA

Gene position: 5919643-5919005 (Counterclockwise)

Preceding gene: 54027558

Following gene: 54027555

Centisome position: 98.31

GC content: 76.37

Gene sequence:

>639_bases
ATGCTCGACGATGTCCGCGTCTGTTTCGCCGGCGACTCCTTCGTCGCGGGAGTCGGTGACCCGCACGCCCTCGGCTGGGC
GGGGCGCCTCACCGCGACGGCCATCCGGGCGGGCGTGCCCCTCACCGCCTACAACCTGGGCGTGCGGCGCGAGACCACGC
CGATGATCGCCGCCCGGCTGATCGCCGAATGCGGGCCACGACTGCCCGCGGACGTCGCCGCGGGAGTGGTGCTCAGCTGC
GGCGTCAACGACGGCACCCGGGAGAACGGCACCGTCCGCGTCGCGGTGCCGACCGCGACGGCGGCGATGCGGGAGCTGCT
CGCCGCGGTGCACGCGCGCGGCTGGCGGGCGCTCGTGGTCGGCCCACCCCCGGTCGACGACGACGCGCACAACGAGCGTT
CCGCCGCGCTGGAACAGTCCTTCGCCACCGTCTGTGCCGCCGCCGGCGTCTCCTTCCTGCCCGTCCACCACGCGCTGCGG
TCGAACGAGGTGTGGATGCGCGAGGTCCGCGCGGGCGACGGCGCACACCCCGGCGCCGCGGGCTACGCCGAACTCGCCGC
GCTCGTCGAGCCCACCTGGGGCGCCTGGCTGGACGGCTTCGCCGACGGCGGCGCGGCGGGCCGCCACGTGCCGGGGTGA

Upstream 100 bases:

>100_bases
GCCGATCATCACCCTGCCAGAAACCGGGCGCCCGGGGGGAGCCCACCCCGGTACCGCCCGGCGTCCGGCCGGTGACCGGC
GACCTGCCACGATCGAGCGC

Downstream 100 bases:

>100_bases
CGATCTTCGGCAAGTCACCGGCACACCGACGAGCATCGCCCGTACCGTGGCCCTATGACCGAGTCAGCAGAACCGCTGCC
CGCGATCCCTCTGGACTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipolytic Protein G-D-S-L Family; GDSL Family Lipase; G-D-S-L Family Lipolytic Protein; GDSL-Like Lipase/Acylhydrolase; Lipase/Esterase; Lipolytic Protein; Lysophospholipase; Lipase; GDSL-Like Lipase/Esterase; Lipolytic G-D-S-L

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLDDVRVCFAGDSFVAGVGDPHALGWAGRLTATAIRAGVPLTAYNLGVRRETTPMIAARLIAECGPRLPADVAAGVVLSC
GVNDGTRENGTVRVAVPTATAAMRELLAAVHARGWRALVVGPPPVDDDAHNERSAALEQSFATVCAAAGVSFLPVHHALR
SNEVWMREVRAGDGAHPGAAGYAELAALVEPTWGAWLDGFADGGAAGRHVPG

Sequences:

>Translated_212_residues
MLDDVRVCFAGDSFVAGVGDPHALGWAGRLTATAIRAGVPLTAYNLGVRRETTPMIAARLIAECGPRLPADVAAGVVLSC
GVNDGTRENGTVRVAVPTATAAMRELLAAVHARGWRALVVGPPPVDDDAHNERSAALEQSFATVCAAAGVSFLPVHHALR
SNEVWMREVRAGDGAHPGAAGYAELAALVEPTWGAWLDGFADGGAAGRHVPG
>Mature_212_residues
MLDDVRVCFAGDSFVAGVGDPHALGWAGRLTATAIRAGVPLTAYNLGVRRETTPMIAARLIAECGPRLPADVAAGVVLSC
GVNDGTRENGTVRVAVPTATAAMRELLAAVHARGWRALVVGPPPVDDDAHNERSAALEQSFATVCAAAGVSFLPVHHALR
SNEVWMREVRAGDGAHPGAAGYAELAALVEPTWGAWLDGFADGGAAGRHVPG

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21815; Mature: 21815

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDDVRVCFAGDSFVAGVGDPHALGWAGRLTATAIRAGVPLTAYNLGVRRETTPMIAARL
CCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
IAECGPRLPADVAAGVVLSCGVNDGTRENGTVRVAVPTATAAMRELLAAVHARGWRALVV
HHHCCCCCCHHHHCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEE
GPPPVDDDAHNERSAALEQSFATVCAAAGVSFLPVHHALRSNEVWMREVRAGDGAHPGAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC
GYAELAALVEPTWGAWLDGFADGGAAGRHVPG
HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDDVRVCFAGDSFVAGVGDPHALGWAGRLTATAIRAGVPLTAYNLGVRRETTPMIAARL
CCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
IAECGPRLPADVAAGVVLSCGVNDGTRENGTVRVAVPTATAAMRELLAAVHARGWRALVV
HHHCCCCCCHHHHCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEE
GPPPVDDDAHNERSAALEQSFATVCAAAGVSFLPVHHALRSNEVWMREVRAGDGAHPGAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC
GYAELAALVEPTWGAWLDGFADGGAAGRHVPG
HHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA