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The map label for this gene is yuzN [H]

Identifier: 54027475

GI number: 54027475

Start: 5830677

End: 5831465

Strand: Reverse

Name: yuzN [H]

Synonym: nfa55010

Alternate gene names: 54027475

Gene position: 5831465-5830677 (Counterclockwise)

Preceding gene: 54027479

Following gene: 54027474

Centisome position: 96.85

GC content: 67.93

Gene sequence:

>789_bases
ATGGACGAGGTTTTCAAGGCGCTGGCCGACCCCGGCAGGCGCCGGCTGCTGGACAGCTTGAACGCCCGCAACGGGCAGAC
GCTGCGCGAGCTGTGCGCGGAACTGGACATGGCGCGCCAGTCGGTGAGCAAGCATCTGGCCGTGCTCGAGACGGCCAATC
TGATCACCACCCGCCGCCGCGGTCGCGAGAAGCTGCACTACCTCAACGCCGAGCCGATCAACGCCATCGCCGACCGCTGG
ATCAACCGCTACCACCGCGGGCGCGTCGAGGCGCTCGCCGACCTGAAGCACGCACTGGAGGCACTTCCCATGAGCGACAA
CGCGTTCGTCTACACCACCTACATCAAGACCACGCCCGAGCAGCTCTGGCGGGCGCTCACCGACCCCGCCTTCACCAGCC
GGTACTGGGGAGTGAGTTTCGATTCCGACTGGCGCACCGGCTCGCCCGTGGTGTGGCGGCAACGCGGGTGGGTGGGCAAG
GATCCCGAGCAGGTGGTCCTCGAATCCGACCCCTATCGCAAGCTGTCCTACACCTGGCACACCATCGACGAAGCGTTCGG
CGCCGAATTCGGGCTCTCCGGCGCGGAATTGGCGCAGTGGGCCGGCGAGCCGCGCTCGAAGGTCAGCTTCGAACTCGAGC
CGCAGGGCGAGGTGGTGAAGCTGACCGTGGTGCACGACGGCTTCGCGCCGGGCAGCCGGGTGCTCGAAGGGGTCAGCGGC
GGCTGGCCCGCCATTCTGGCCGCTCTGAAGACGCTGCTCGAGACCGGGGAGGTGCTGTCCATCGACTGA

Upstream 100 bases:

>100_bases
GCAGCAATGCGGTTTCGGCGGAGACGGCGTTGACATGCAGCCGAATGGCTGCCTAAACTATTCACGCAGCCGAACGGCTG
CCTATGTTGGATCGGTGGGC

Downstream 100 bases:

>100_bases
CGGCCGGAAAAACAGTGAGCACTGCTCTTGACGGGGCCGAAGCGGCGGTGAATACTGGTCTCAACAGAGAGCACTGCTCA
CAAAGGAGTCGACATGACCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MDEVFKALADPGRRRLLDSLNARNGQTLRELCAELDMARQSVSKHLAVLETANLITTRRRGREKLHYLNAEPINAIADRW
INRYHRGRVEALADLKHALEALPMSDNAFVYTTYIKTTPEQLWRALTDPAFTSRYWGVSFDSDWRTGSPVVWRQRGWVGK
DPEQVVLESDPYRKLSYTWHTIDEAFGAEFGLSGAELAQWAGEPRSKVSFELEPQGEVVKLTVVHDGFAPGSRVLEGVSG
GWPAILAALKTLLETGEVLSID

Sequences:

>Translated_262_residues
MDEVFKALADPGRRRLLDSLNARNGQTLRELCAELDMARQSVSKHLAVLETANLITTRRRGREKLHYLNAEPINAIADRW
INRYHRGRVEALADLKHALEALPMSDNAFVYTTYIKTTPEQLWRALTDPAFTSRYWGVSFDSDWRTGSPVVWRQRGWVGK
DPEQVVLESDPYRKLSYTWHTIDEAFGAEFGLSGAELAQWAGEPRSKVSFELEPQGEVVKLTVVHDGFAPGSRVLEGVSG
GWPAILAALKTLLETGEVLSID
>Mature_262_residues
MDEVFKALADPGRRRLLDSLNARNGQTLRELCAELDMARQSVSKHLAVLETANLITTRRRGREKLHYLNAEPINAIADRW
INRYHRGRVEALADLKHALEALPMSDNAFVYTTYIKTTPEQLWRALTDPAFTSRYWGVSFDSDWRTGSPVVWRQRGWVGK
DPEQVVLESDPYRKLSYTWHTIDEAFGAEFGLSGAELAQWAGEPRSKVSFELEPQGEVVKLTVVHDGFAPGSRVLEGVSG
GWPAILAALKTLLETGEVLSID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 29477; Mature: 29477

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVFKALADPGRRRLLDSLNARNGQTLRELCAELDMARQSVSKHLAVLETANLITTRRR
CHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GREKLHYLNAEPINAIADRWINRYHRGRVEALADLKHALEALPMSDNAFVYTTYIKTTPE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHH
QLWRALTDPAFTSRYWGVSFDSDWRTGSPVVWRQRGWVGKDPEQVVLESDPYRKLSYTWH
HHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHEEECCCCCCCHHHHHH
TIDEAFGAEFGLSGAELAQWAGEPRSKVSFELEPQGEVVKLTVVHDGFAPGSRVLEGVSG
HHHHHHCHHCCCCHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCCCHHHHHHCCCC
GWPAILAALKTLLETGEVLSID
CHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MDEVFKALADPGRRRLLDSLNARNGQTLRELCAELDMARQSVSKHLAVLETANLITTRRR
CHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GREKLHYLNAEPINAIADRWINRYHRGRVEALADLKHALEALPMSDNAFVYTTYIKTTPE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHH
QLWRALTDPAFTSRYWGVSFDSDWRTGSPVVWRQRGWVGKDPEQVVLESDPYRKLSYTWH
HHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHEEECCCCCCCHHHHHH
TIDEAFGAEFGLSGAELAQWAGEPRSKVSFELEPQGEVVKLTVVHDGFAPGSRVLEGVSG
HHHHHHCHHCCCCHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCCCHHHHHHCCCC
GWPAILAALKTLLETGEVLSID
CHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]