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The map label for this gene is 54027454

Identifier: 54027454

GI number: 54027454

Start: 5805513

End: 5806997

Strand: Reverse

Name: 54027454

Synonym: nfa54800

Alternate gene names: NA

Gene position: 5806997-5805513 (Counterclockwise)

Preceding gene: 54027455

Following gene: 54027453

Centisome position: 96.44

GC content: 76.97

Gene sequence:

>1485_bases
ATGGCGCTGCTGACCGCCCTGCGCGCGCCGGGTTCGGCCGGGCAGGTGGCGCTGGTCGCCCCGGACGACGCCAACACGAC
GCTGCTGCGTACCGAACTGGCCCGCTTCGAGCCGCGGATCGCCCTCACCGAGCCGCTCACCGATGTCGTCGGCGTCGAGA
CCACACTCTCGGCGGCGCCCACCCCGCCCGCCGCCGCGCTGATCCTGCTCGACGCGGGCAGCGCGCTCGGCGCCGACGCG
CTCGCGCTGATCGGCAGGCTGCGCGCGGCGGGCACCACCATCCTGCTCGCGATGAACGGCATCCACGCCTACGCGGACTG
GCGGCGGGTGCGCGAGCACGACCTGGCGCTGCTGGCCGCCCACGGCTTCGGCGACCTGGACATCCTGCCGGTTTCCGCGC
GCCTGGCCGTCGCCGCCCGCACCGGCGACACCGCCCTGCTCGACCGCTCCGGCCTGAGCGCGCTGCACGCCGCGCTCACC
GCCGCGACCGCGGCCGCCGAGGGTGACGGACGCGATCGCAGGGCGGCCGTGCTGTCCCGGGTGCTCACCGACACCCGTCG
CCGCATCACCGAACAGATGGAGGCGCTGCGCTCGGACGCCGAGACCGCGCGCTGGCGCGCGGAGCGGGCCACGCTGCTCG
CCGCCCGGGACGGCGGCCGCGCCAGCGCCACGGCGGCGTTGCGCGGGCAACTGCACCTGGCGCGCGTCGACCTGATGACC
GAGACCGGCGCCCGGGTGCGCACGCTGCACGCCACCGCCCGCGCCGAGGTCGACCGGCTGGCGCGCGGCGAGCTCACCGG
TTACCCGCGCCGGCTCCAACAGTCCGTCACCGACCTCACCGCCGGTCTCGACCAGGACATCGACCGCAGGATCGCCGAGC
TCGCCCACGGCGTCGACGCCGCCGCCGCACCGGTGGCCCCGGACGCGAGCCGGGCACCCGCGTTCGCCCCGGGCGCGCAC
CGCGCCGCCGAGCTGCCGCCGCGCCGTGTGGATCCCGCACCGCGGGTCGGCCCGGATCCGGAGCCTCGGCAGGCCGGGGT
GGAAGACCACTTGATGGTCGCCCTCGGCGCCAGCGCGGGCGCCGGTCTGGGCAGGCTGCTGGTGTCGCCGCTGTCGCTGG
TGCCCGCGCTCGACGTCGCGAGCATCCCGGTCACCTTGGCGCTCGGCGCGCTGGCGGCCTGGTGGGTGGTGCGGGCGCGG
CGGCAGGTGGCCGACCGGGCACATCTGCGGCAATGGGTCGCCGACGCGCTGGTCAACGTCAAGGCCCAACTCGAGCAGCG
GGTGGCGACCGCGCTGGTGGCGGCCGAGACCGCGCTGGCCGAGCGGGTGATGCGGGAGAGCGCGCAGCGGATCGTCGACA
ACGACCGCAGGGTCGCCGAATTGGAGGCCCGCATCCGGCGGGCGTCCGCCGAGCGCCCCGGCCAGCTGGCGGCATGTGAA
CGCGACATCGCCGTGCTCGACCGGCACCTGCCCGGAGCCGGGTGA

Upstream 100 bases:

>100_bases
AGCAGTGCCGGACTCTGAAAGAACCGCGGTCGGCGCTTCGGCCGATCCCGGCGTGCCGCCCGAGCTCGATGCCGTGGTGG
CCCGATGGAATCCGCAGGGC

Downstream 100 bases:

>100_bases
AAAGCGCCCTACCGGTCGGTTCTGCGCATCGTGGCTGTTGAATCGGTCACTGTCTGGGTACACATTGACCAACCCGGCTC
CGTTCGGGTGGTCACATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MALLTALRAPGSAGQVALVAPDDANTTLLRTELARFEPRIALTEPLTDVVGVETTLSAAPTPPAAALILLDAGSALGADA
LALIGRLRAAGTTILLAMNGIHAYADWRRVREHDLALLAAHGFGDLDILPVSARLAVAARTGDTALLDRSGLSALHAALT
AATAAAEGDGRDRRAAVLSRVLTDTRRRITEQMEALRSDAETARWRAERATLLAARDGGRASATAALRGQLHLARVDLMT
ETGARVRTLHATARAEVDRLARGELTGYPRRLQQSVTDLTAGLDQDIDRRIAELAHGVDAAAAPVAPDASRAPAFAPGAH
RAAELPPRRVDPAPRVGPDPEPRQAGVEDHLMVALGASAGAGLGRLLVSPLSLVPALDVASIPVTLALGALAAWWVVRAR
RQVADRAHLRQWVADALVNVKAQLEQRVATALVAAETALAERVMRESAQRIVDNDRRVAELEARIRRASAERPGQLAACE
RDIAVLDRHLPGAG

Sequences:

>Translated_494_residues
MALLTALRAPGSAGQVALVAPDDANTTLLRTELARFEPRIALTEPLTDVVGVETTLSAAPTPPAAALILLDAGSALGADA
LALIGRLRAAGTTILLAMNGIHAYADWRRVREHDLALLAAHGFGDLDILPVSARLAVAARTGDTALLDRSGLSALHAALT
AATAAAEGDGRDRRAAVLSRVLTDTRRRITEQMEALRSDAETARWRAERATLLAARDGGRASATAALRGQLHLARVDLMT
ETGARVRTLHATARAEVDRLARGELTGYPRRLQQSVTDLTAGLDQDIDRRIAELAHGVDAAAAPVAPDASRAPAFAPGAH
RAAELPPRRVDPAPRVGPDPEPRQAGVEDHLMVALGASAGAGLGRLLVSPLSLVPALDVASIPVTLALGALAAWWVVRAR
RQVADRAHLRQWVADALVNVKAQLEQRVATALVAAETALAERVMRESAQRIVDNDRRVAELEARIRRASAERPGQLAACE
RDIAVLDRHLPGAG
>Mature_493_residues
ALLTALRAPGSAGQVALVAPDDANTTLLRTELARFEPRIALTEPLTDVVGVETTLSAAPTPPAAALILLDAGSALGADAL
ALIGRLRAAGTTILLAMNGIHAYADWRRVREHDLALLAAHGFGDLDILPVSARLAVAARTGDTALLDRSGLSALHAALTA
ATAAAEGDGRDRRAAVLSRVLTDTRRRITEQMEALRSDAETARWRAERATLLAARDGGRASATAALRGQLHLARVDLMTE
TGARVRTLHATARAEVDRLARGELTGYPRRLQQSVTDLTAGLDQDIDRRIAELAHGVDAAAAPVAPDASRAPAFAPGAHR
AAELPPRRVDPAPRVGPDPEPRQAGVEDHLMVALGASAGAGLGRLLVSPLSLVPALDVASIPVTLALGALAAWWVVRARR
QVADRAHLRQWVADALVNVKAQLEQRVATALVAAETALAERVMRESAQRIVDNDRRVAELEARIRRASAERPGQLAACER
DIAVLDRHLPGAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52031; Mature: 51900

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLTALRAPGSAGQVALVAPDDANTTLLRTELARFEPRIALTEPLTDVVGVETTLSAAP
CCHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCHHHHHCCHHHCCCCC
TPPAAALILLDAGSALGADALALIGRLRAAGTTILLAMNGIHAYADWRRVREHDLALLAA
CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCEEEEEE
HGFGDLDILPVSARLAVAARTGDTALLDRSGLSALHAALTAATAAAEGDGRDRRAAVLSR
CCCCCCEEEECCCEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VLTDTRRRITEQMEALRSDAETARWRAERATLLAARDGGRASATAALRGQLHLARVDLMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCEEEHHHHHHH
ETGARVRTLHATARAEVDRLARGELTGYPRRLQQSVTDLTAGLDQDIDRRIAELAHGVDA
CCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
AAAPVAPDASRAPAFAPGAHRAAELPPRRVDPAPRVGPDPEPRQAGVEDHLMVALGASAG
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCC
AGLGRLLVSPLSLVPALDVASIPVTLALGALAAWWVVRARRQVADRAHLRQWVADALVNV
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAQLEQRVATALVAAETALAERVMRESAQRIVDNDRRVAELEARIRRASAERPGQLAACE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHH
RDIAVLDRHLPGAG
HHHHHHHHCCCCCC
>Mature Secondary Structure 
ALLTALRAPGSAGQVALVAPDDANTTLLRTELARFEPRIALTEPLTDVVGVETTLSAAP
CHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCHHHHHCCHHHCCCCC
TPPAAALILLDAGSALGADALALIGRLRAAGTTILLAMNGIHAYADWRRVREHDLALLAA
CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCEEEEEE
HGFGDLDILPVSARLAVAARTGDTALLDRSGLSALHAALTAATAAAEGDGRDRRAAVLSR
CCCCCCEEEECCCEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VLTDTRRRITEQMEALRSDAETARWRAERATLLAARDGGRASATAALRGQLHLARVDLMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCEEEHHHHHHH
ETGARVRTLHATARAEVDRLARGELTGYPRRLQQSVTDLTAGLDQDIDRRIAELAHGVDA
CCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
AAAPVAPDASRAPAFAPGAHRAAELPPRRVDPAPRVGPDPEPRQAGVEDHLMVALGASAG
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCC
AGLGRLLVSPLSLVPALDVASIPVTLALGALAAWWVVRARRQVADRAHLRQWVADALVNV
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAQLEQRVATALVAAETALAERVMRESAQRIVDNDRRVAELEARIRRASAERPGQLAACE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHH
RDIAVLDRHLPGAG
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA