| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
Click here to switch to the map view.
The map label for this gene is 54027445
Identifier: 54027445
GI number: 54027445
Start: 5792704
End: 5793900
Strand: Reverse
Name: 54027445
Synonym: nfa54710
Alternate gene names: NA
Gene position: 5793900-5792704 (Counterclockwise)
Preceding gene: 54027447
Following gene: 54027439
Centisome position: 96.22
GC content: 73.43
Gene sequence:
>1197_bases ATGACGATCACCCCTGCGGCCACGCGCCGTTTCCTCCCCGCCCTCGAAGGCATGCGCGGGCTGGCGGCGCTCGGTGTGGT GCTCACCCACGTGGCGTTCCAGACCGGTGCCGGGGGAACGCCGGTGCTCGGCCGCATCTGGGGCCGGTTCGACATGGCGG TGGCGGTGTTCTTCGCGCTCTCCGGTTTCCTGCTGTGGCGCCCACACGCGGCCGCGGCCCGCGGGCTGGGGCGGGCCCCG TCGACCGGCTACTACCTGCGTCACCGCGCGGCGCGCATCCTGCCCGCCTACTGGGTGGTGGTGTGCGCGGTGCTGCTGCT GTTGCCCAACGCCGCCGACACCGCGGGCGCGCGGGTGTGGCTGTCGAATCTCGCGCTGCTCCAGGTGTTCGTCCCCTTGA CACTGACCGACGGGCTGACCCAGATGTGGAGCCTGTCGGTGGAGGTGGCCTTCTATCTGGTGCTGCCGCTGCTGGCGCTG GCGCTGGTCCGGTTGCGCGGTCCGGCCGCCCGGTGGCGGGTACCCGCGGTGCTGGCGCTTGGCGTGCTCAGCCTGGGCTG GAACTTCCTGCCGATTCCCACCCCCGACGCCATCCATGCCGACAACTGGCTGCCCGGTTACCTGCCGTGGTTCGCCGGCG GCATGCTGCTGGCAGAACTGGCCGATCAATCCCCGGCCGGTTCGCGGGTGCGGCGCTGGGGCGGCAGCCGGGCGCTGATG TGGCCCCTGGCGCTGGTCGCCTTCCTGCTCGCGGCCACCGACCTGGCCGGGCCCGCCGGGCTGACCCGCGCCGAACCGTG GCAGTACGCGGTGAAGATGGGGCTGGGGGCGGTGATCGGCGGGTGCCTGATCGCCCCGCTGGTGCTCGGCGACCGTCCGC ATCGCTGGCTCGAATCACCGCAGGCCGCGACCATCGGCCGCTGGTCCTACGGCATCTTCCTGTGGCATCTGGCGGTGCTG TCGATCGTGTTCCCGGTCTTCGGCATCCTGCCGTTCGCGGGCGATTTCGTCTGGGTGCTCGTCCTCACCGTCGCCCTGAC CCTGCCCGTCGCCGCCGCGAGCTACGCGCTGGTCGAGGAGCCCGCCCGGCAACTGGCCCGCCGCATGGACCGGCGGGCGC GGGCCCGCGCCGAGCACCGCGAACCCGCCGCGCAAACGGCTGCCACGCCCGACCCCGCCGCGGTCGGCGCCCCCTGA
Upstream 100 bases:
>100_bases GTGCCGAGGCCGAATCCGGCCGGAAATCGCCCGAGTCTAGCGCGAAAACTGAAACCCCCGGTTCTCAACCCGCATGCTCG GACGGCCACACTGGAGCCCG
Downstream 100 bases:
>100_bases CCGACCCGCGGCCCGCGCGGAGGCGGCCGGCGGCCGTTGGCGCTTCCTGCCCCGTTCGACACCACGACGAATTCTCGTCC GGTACCCCCGCTGTCGCGCC
Product: putative acyltransferase
Products: NA
Alternate protein names: Integral Membrane Acyltransferase; Acyltransferase-Like Protein; Membrane Acyltransferase; 3-O-Acyltransferase; Acyltransferases-Like Protein
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTITPAATRRFLPALEGMRGLAALGVVLTHVAFQTGAGGTPVLGRIWGRFDMAVAVFFALSGFLLWRPHAAAARGLGRAP STGYYLRHRAARILPAYWVVVCAVLLLLPNAADTAGARVWLSNLALLQVFVPLTLTDGLTQMWSLSVEVAFYLVLPLLAL ALVRLRGPAARWRVPAVLALGVLSLGWNFLPIPTPDAIHADNWLPGYLPWFAGGMLLAELADQSPAGSRVRRWGGSRALM WPLALVAFLLAATDLAGPAGLTRAEPWQYAVKMGLGAVIGGCLIAPLVLGDRPHRWLESPQAATIGRWSYGIFLWHLAVL SIVFPVFGILPFAGDFVWVLVLTVALTLPVAAASYALVEEPARQLARRMDRRARARAEHREPAAQTAATPDPAAVGAP
Sequences:
>Translated_398_residues MTITPAATRRFLPALEGMRGLAALGVVLTHVAFQTGAGGTPVLGRIWGRFDMAVAVFFALSGFLLWRPHAAAARGLGRAP STGYYLRHRAARILPAYWVVVCAVLLLLPNAADTAGARVWLSNLALLQVFVPLTLTDGLTQMWSLSVEVAFYLVLPLLAL ALVRLRGPAARWRVPAVLALGVLSLGWNFLPIPTPDAIHADNWLPGYLPWFAGGMLLAELADQSPAGSRVRRWGGSRALM WPLALVAFLLAATDLAGPAGLTRAEPWQYAVKMGLGAVIGGCLIAPLVLGDRPHRWLESPQAATIGRWSYGIFLWHLAVL SIVFPVFGILPFAGDFVWVLVLTVALTLPVAAASYALVEEPARQLARRMDRRARARAEHREPAAQTAATPDPAAVGAP >Mature_397_residues TITPAATRRFLPALEGMRGLAALGVVLTHVAFQTGAGGTPVLGRIWGRFDMAVAVFFALSGFLLWRPHAAAARGLGRAPS TGYYLRHRAARILPAYWVVVCAVLLLLPNAADTAGARVWLSNLALLQVFVPLTLTDGLTQMWSLSVEVAFYLVLPLLALA LVRLRGPAARWRVPAVLALGVLSLGWNFLPIPTPDAIHADNWLPGYLPWFAGGMLLAELADQSPAGSRVRRWGGSRALMW PLALVAFLLAATDLAGPAGLTRAEPWQYAVKMGLGAVIGGCLIAPLVLGDRPHRWLESPQAATIGRWSYGIFLWHLAVLS IVFPVFGILPFAGDFVWVLVLTVALTLPVAAASYALVEEPARQLARRMDRRARARAEHREPAAQTAATPDPAAVGAP
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42718; Mature: 42587
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITPAATRRFLPALEGMRGLAALGVVLTHVAFQTGAGGTPVLGRIWGRFDMAVAVFFAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH SGFLLWRPHAAAARGLGRAPSTGYYLRHRAARILPAYWVVVCAVLLLLPNAADTAGARVW HHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LSNLALLQVFVPLTLTDGLTQMWSLSVEVAFYLVLPLLALALVRLRGPAARWRVPAVLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GVLSLGWNFLPIPTPDAIHADNWLPGYLPWFAGGMLLAELADQSPAGSRVRRWGGSRALM HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHH WPLALVAFLLAATDLAGPAGLTRAEPWQYAVKMGLGAVIGGCLIAPLVLGDRPHRWLESP HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC QAATIGRWSYGIFLWHLAVLSIVFPVFGILPFAGDFVWVLVLTVALTLPVAAASYALVEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PARQLARRMDRRARARAEHREPAAQTAATPDPAAVGAP HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure TITPAATRRFLPALEGMRGLAALGVVLTHVAFQTGAGGTPVLGRIWGRFDMAVAVFFAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH SGFLLWRPHAAAARGLGRAPSTGYYLRHRAARILPAYWVVVCAVLLLLPNAADTAGARVW HHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LSNLALLQVFVPLTLTDGLTQMWSLSVEVAFYLVLPLLALALVRLRGPAARWRVPAVLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GVLSLGWNFLPIPTPDAIHADNWLPGYLPWFAGGMLLAELADQSPAGSRVRRWGGSRALM HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHH WPLALVAFLLAATDLAGPAGLTRAEPWQYAVKMGLGAVIGGCLIAPLVLGDRPHRWLESP HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC QAATIGRWSYGIFLWHLAVLSIVFPVFGILPFAGDFVWVLVLTVALTLPVAAASYALVEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PARQLARRMDRRARARAEHREPAAQTAATPDPAAVGAP HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA