Click here to switch to the map view.

The map label for this gene is cht60 [H]

Identifier: 54027439

GI number: 54027439

Start: 5784585

End: 5785751

Strand: Reverse

Name: cht60 [H]

Synonym: nfa54650

Alternate gene names: 54027439

Gene position: 5785751-5784585 (Counterclockwise)

Preceding gene: 54027445

Following gene: 54027438

Centisome position: 96.09

GC content: 73.01

Gene sequence:

>1167_bases
ATGCGGAAGACGCCCCTGGTCCTGCTCGCACTGTGCGCGGCGATCGCCACCGCCTGCTCGGGCGGCGGCACCACCGCCAC
CTCGACGTCGACGGCCCAGCCCGCCGCGTCGACCTCGGCCACCGAGCCGTCCACCGGCACCGGCACGCCGGTCGCCCGCG
ACTGCGGCGCGGAGTTCCTCGGCTCGCTCACCACCCGGCAGAAGCTGGCGCAGCTGCTCACCGTGGGCATCACCGGCACC
GCCGACGCGCTCGACGTGGTGAACCGCGAGCAGATCGGCGGCATCTTCGTCGGCAGCTGGACCGATCCGTCGCTGCTGGC
GGACGGGCAGCTCCCGCAGGTGCAGGCCGCCGCGCGGGTACCGGTGATGGTGACGATCGACGAGGAGGGCGGCCGCGTCT
CGCGCGCCCGTGACCTCGTCGGCGCCGCCCCCTCGGCCCGCGACACCGCGCAGACCATGACGCCGGAGGAGTTCTACCAG
GCCACCCTCACCCGCGGCCGGGCGCTGAAGGACCTCGGCATCACGGTGAACTTCGCCCCCGACGTCGACGTCAGCGCCCA
GCCCGACGACTCGGTGATCGGCGACCGCTCCTTCTCCGACGATCCCGCGGTCGTCACCCGCTACGCCGAGGCCTACATCC
GCGCCATGCGCGAGGTCGGCGTCGGCACGGTGATGAAACACTTCCCCGGCCACGGCTCCGGTTCCGGCGATTCGCACACC
GGCGCGGTGCGCACGCCGCCGTTCGAGCAGCTCCAGGCCGTCGACCTGGTGCCCTACCGCGAGCTGATCGGCTCCGGCGC
GGCGGTGATGGTCGGCCACCTCGACGTGCCCGGCCTCACCACCCCGGACGTGCCTGCGAGTATCAGCCCGCAGGTGATGA
CCCTGTTGCGCCAGGGCACCGGCTACGGCGCCGCGCCGTTCCAGGGTCCGATCTTCACCGACGACCTGGGCGGCATGGCC
GCGATCACGTCCCGGATGAGCATCGAGGAGGCGGTGGAGGCCGCGCTGGTCGCCGGCGCCGACAACGCCCTGTGGATCAC
CACCGACGCGGTCACCTCGGTGCTGGACCGGCTGGAACAGGCGGTCGCGAGCGGCCGGTTGCCGATGGCGCAGGTGGACG
CCTCGGTGCTGCGCATGGCGGCCTACAAGGGCGTTCTGCCCTGTTGA

Upstream 100 bases:

>100_bases
GAGTCTCGTGCTGTCAGGTTACTCCCGCGAGCGTGGCTACCGGCCGGTCGACGCGCGGGCGTTGGCGGCGACGCGCCGGG
CGCGACTACCGTGGAATCCC

Downstream 100 bases:

>100_bases
GGTCACGGGTCGGCACGGCCGGACGGCGCACGGATCCGTCTCGGCCGAACTTACCTTGGAGTAATATCAGAGTCTCGGTT
TGCGGTAGGAGAGTGGATGG

Product: putative glycosyl hydrolase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; Chitobiase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRKTPLVLLALCAAIATACSGGGTTATSTSTAQPAASTSATEPSTGTGTPVARDCGAEFLGSLTTRQKLAQLLTVGITGT
ADALDVVNREQIGGIFVGSWTDPSLLADGQLPQVQAAARVPVMVTIDEEGGRVSRARDLVGAAPSARDTAQTMTPEEFYQ
ATLTRGRALKDLGITVNFAPDVDVSAQPDDSVIGDRSFSDDPAVVTRYAEAYIRAMREVGVGTVMKHFPGHGSGSGDSHT
GAVRTPPFEQLQAVDLVPYRELIGSGAAVMVGHLDVPGLTTPDVPASISPQVMTLLRQGTGYGAAPFQGPIFTDDLGGMA
AITSRMSIEEAVEAALVAGADNALWITTDAVTSVLDRLEQAVASGRLPMAQVDASVLRMAAYKGVLPC

Sequences:

>Translated_388_residues
MRKTPLVLLALCAAIATACSGGGTTATSTSTAQPAASTSATEPSTGTGTPVARDCGAEFLGSLTTRQKLAQLLTVGITGT
ADALDVVNREQIGGIFVGSWTDPSLLADGQLPQVQAAARVPVMVTIDEEGGRVSRARDLVGAAPSARDTAQTMTPEEFYQ
ATLTRGRALKDLGITVNFAPDVDVSAQPDDSVIGDRSFSDDPAVVTRYAEAYIRAMREVGVGTVMKHFPGHGSGSGDSHT
GAVRTPPFEQLQAVDLVPYRELIGSGAAVMVGHLDVPGLTTPDVPASISPQVMTLLRQGTGYGAAPFQGPIFTDDLGGMA
AITSRMSIEEAVEAALVAGADNALWITTDAVTSVLDRLEQAVASGRLPMAQVDASVLRMAAYKGVLPC
>Mature_388_residues
MRKTPLVLLALCAAIATACSGGGTTATSTSTAQPAASTSATEPSTGTGTPVARDCGAEFLGSLTTRQKLAQLLTVGITGT
ADALDVVNREQIGGIFVGSWTDPSLLADGQLPQVQAAARVPVMVTIDEEGGRVSRARDLVGAAPSARDTAQTMTPEEFYQ
ATLTRGRALKDLGITVNFAPDVDVSAQPDDSVIGDRSFSDDPAVVTRYAEAYIRAMREVGVGTVMKHFPGHGSGSGDSHT
GAVRTPPFEQLQAVDLVPYRELIGSGAAVMVGHLDVPGLTTPDVPASISPQVMTLLRQGTGYGAAPFQGPIFTDDLGGMA
AITSRMSIEEAVEAALVAGADNALWITTDAVTSVLDRLEQAVASGRLPMAQVDASVLRMAAYKGVLPC

Specific function: Most active towards p-nitrophenyl-N-acetyl-beta-D- glucosaminide(PNP-beta-GlcNAc) and diacetylchitobiose [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=297, Percent_Identity=32.6599326599327, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019800
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 39999; Mature: 39999

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTPLVLLALCAAIATACSGGGTTATSTSTAQPAASTSATEPSTGTGTPVARDCGAEFL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GSLTTRQKLAQLLTVGITGTADALDVVNREQIGGIFVGSWTDPSLLADGQLPQVQAAARV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEECCCCCCEEECCCCCCHHHHCCC
PVMVTIDEEGGRVSRARDLVGAAPSARDTAQTMTPEEFYQATLTRGRALKDLGITVNFAP
CEEEEECCCCCCHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCEEHHCCEEEEECC
DVDVSAQPDDSVIGDRSFSDDPAVVTRYAEAYIRAMREVGVGTVMKHFPGHGSGSGDSHT
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCC
GAVRTPPFEQLQAVDLVPYRELIGSGAAVMVGHLDVPGLTTPDVPASISPQVMTLLRQGT
CCCCCCCHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCC
GYGAAPFQGPIFTDDLGGMAAITSRMSIEEAVEAALVAGADNALWITTDAVTSVLDRLEQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH
AVASGRLPMAQVDASVLRMAAYKGVLPC
HHHHCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRKTPLVLLALCAAIATACSGGGTTATSTSTAQPAASTSATEPSTGTGTPVARDCGAEFL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GSLTTRQKLAQLLTVGITGTADALDVVNREQIGGIFVGSWTDPSLLADGQLPQVQAAARV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEECCCCCCEEECCCCCCHHHHCCC
PVMVTIDEEGGRVSRARDLVGAAPSARDTAQTMTPEEFYQATLTRGRALKDLGITVNFAP
CEEEEECCCCCCHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCEEHHCCEEEEECC
DVDVSAQPDDSVIGDRSFSDDPAVVTRYAEAYIRAMREVGVGTVMKHFPGHGSGSGDSHT
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCC
GAVRTPPFEQLQAVDLVPYRELIGSGAAVMVGHLDVPGLTTPDVPASISPQVMTLLRQGT
CCCCCCCHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCC
GYGAAPFQGPIFTDDLGGMAAITSRMSIEEAVEAALVAGADNALWITTDAVTSVLDRLEQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH
AVASGRLPMAQVDASVLRMAAYKGVLPC
HHHHCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063094 [H]