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The map label for this gene is uidR [C]

Identifier: 54027438

GI number: 54027438

Start: 5783889

End: 5784488

Strand: Reverse

Name: uidR [C]

Synonym: nfa54640

Alternate gene names: 54027438

Gene position: 5784488-5783889 (Counterclockwise)

Preceding gene: 54027439

Following gene: 54027437

Centisome position: 96.07

GC content: 68.17

Gene sequence:

>600_bases
ATGGCGGGCGGAACGAAACGACTTCCCCGGGCGGTTCGTGAGCAGCAGATGCTCGACGCCGCGGTGGAAGTCTTCGCGCG
CAAGGGGTTCCACGATACCTCCATGGACGCCATCGCCGCCGAGGCGAAGATCTCCAAGCCGATGCTCTATCTCTACTACG
GCTCCAAGGACGAGCTGTTCCGCGCCTGCATCCAGCGCGAGGGCATCCGGTTGATCGAGGCCGTCGCGCCCGCGGGCAAC
CCGCTGCTGTCCCCGCACGAACAGCTGCGCACCGCGTTGGAAGCGTTCCTCGGCTTCGTCGACCGCAACCGCCGCTCCTG
GCAGGTGCTCTACCGGCAGGCGATCGGCCAGCAGGCCTTCGCCTCCGAGATCGACAATGCCCGCGAACGGGTCATCGAAC
TCACCGCCAAGCTGCTGGAGTCCAGCGCCAAGCACGCCGAGCCCGGCACGAACTTCGACATCGTCGCCGCCGCCGTCATC
GGTGCGGGGGAGGCCATCGCCGATCGCGTCGCGGGCGGGCGCATCGAGGTCTCCGAGGCCGTCGATCTGCTCGACGACCT
GGCCTGGAGCGGTCTGGCGGGCCGCAAGAAGAGCGAGTAG

Upstream 100 bases:

>100_bases
TTGAGGTCACGGGTCGGCACGGCCGGACGGCGCACGGATCCGTCTCGGCCGAACTTACCTTGGAGTAATATCAGAGTCTC
GGTTTGCGGTAGGAGAGTGG

Downstream 100 bases:

>100_bases
CCGCTGGCGTTGCGCGGTGCTCGCCGCTCTGTCACGATGTGGCGCGATCGACTGCGGACAGGGCGGTATGCCGCCCGGCG
GGAACGGGGGGCGGAATTGT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; LOW QUALITY PROTEIN TetR-Family Regulatory Protein; Regulatory Protein; Transcriptional Regulator TetR-Family; TetR Transcriptional Regulator; TetR-Family Protein Regulatory Protein; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MAGGTKRLPRAVREQQMLDAAVEVFARKGFHDTSMDAIAAEAKISKPMLYLYYGSKDELFRACIQREGIRLIEAVAPAGN
PLLSPHEQLRTALEAFLGFVDRNRRSWQVLYRQAIGQQAFASEIDNARERVIELTAKLLESSAKHAEPGTNFDIVAAAVI
GAGEAIADRVAGGRIEVSEAVDLLDDLAWSGLAGRKKSE

Sequences:

>Translated_199_residues
MAGGTKRLPRAVREQQMLDAAVEVFARKGFHDTSMDAIAAEAKISKPMLYLYYGSKDELFRACIQREGIRLIEAVAPAGN
PLLSPHEQLRTALEAFLGFVDRNRRSWQVLYRQAIGQQAFASEIDNARERVIELTAKLLESSAKHAEPGTNFDIVAAAVI
GAGEAIADRVAGGRIEVSEAVDLLDDLAWSGLAGRKKSE
>Mature_198_residues
AGGTKRLPRAVREQQMLDAAVEVFARKGFHDTSMDAIAAEAKISKPMLYLYYGSKDELFRACIQREGIRLIEAVAPAGNP
LLSPHEQLRTALEAFLGFVDRNRRSWQVLYRQAIGQQAFASEIDNARERVIELTAKLLESSAKHAEPGTNFDIVAAAVIG
AGEAIADRVAGGRIEVSEAVDLLDDLAWSGLAGRKKSE

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21738; Mature: 21607

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGTKRLPRAVREQQMLDAAVEVFARKGFHDTSMDAIAAEAKISKPMLYLYYGSKDELF
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHH
RACIQREGIRLIEAVAPAGNPLLSPHEQLRTALEAFLGFVDRNRRSWQVLYRQAIGQQAF
HHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ASEIDNARERVIELTAKLLESSAKHAEPGTNFDIVAAAVIGAGEAIADRVAGGRIEVSEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCEEHHHH
VDLLDDLAWSGLAGRKKSE
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AGGTKRLPRAVREQQMLDAAVEVFARKGFHDTSMDAIAAEAKISKPMLYLYYGSKDELF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHH
RACIQREGIRLIEAVAPAGNPLLSPHEQLRTALEAFLGFVDRNRRSWQVLYRQAIGQQAF
HHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ASEIDNARERVIELTAKLLESSAKHAEPGTNFDIVAAAVIGAGEAIADRVAGGRIEVSEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCEEHHHH
VDLLDDLAWSGLAGRKKSE
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA