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The map label for this gene is 54027432

Identifier: 54027432

GI number: 54027432

Start: 5775963

End: 5777294

Strand: Reverse

Name: 54027432

Synonym: nfa54580

Alternate gene names: NA

Gene position: 5777294-5775963 (Counterclockwise)

Preceding gene: 54027433

Following gene: 54027430

Centisome position: 95.95

GC content: 70.5

Gene sequence:

>1332_bases
ATGGGTTGGAAGACGATCACGGCCGCGCTCGCGGGCGCGGCACTGACGATGTCGGCGGCGGGCGCCGCCGTGGCGGAACC
GCAGCCGCCGCGCACGCCCGGCCTGAACGAGGTGTTCAACGGCTACGTCGTCGGCGCGCTGCAGGGCGCCACCGTCGCCT
CCCCCGACGAGATTCTCCGCGGTCTGCGGGCCGACGACCCCTTCTACGAAGAACCGCCGCTCACCGGCGCCGAGCAGCCG
GGCACGGTGCTGAAGTCGAAGAAGGTCGACGTGCTGTTCACCGGTGTGAAGCCGGCGAACCTCGACGCCTACAAGCTCAT
GTACGTCACCACCGGGCTGGACGGGGTCACGCCGATCATCAGCACCGGCATCCTGATGATCCCGGTGGACGGGCAGCCGG
TGGGTGAGAAGCACCTGATCTCCTACCAGGAGGCCAACGACAGCGTCGGTCCGTCCTGTCATCCGAGCACCCAGTGGACC
GGCGGGGCGCCCATGGACGGCGCGTCCTGGTCGGCCCTCGGCCCGCTGGCGCTGATGTTCGGCAAGGGCCACGCGGTGAT
GATCTCCGATGTCGGCAACGACGCCGACCGGGATCCGCACGGGGTGTTCGCGGGCAAGTTCGCCGCGCGCGCCCAGCTCG
ACGGCGCCCGCGCCGCGCTGAACTTCACCGAGGGCGGGCTGAATCCCGACGCGCAGGTGGCGCTGTTCGGCATCGCGGGC
GGCGGCGTCGGCGCCGCCTTCGCCGCCGAACTCCAGCCGACCTACGCCCCGGACCTCGACGTGAAGTCCACCGTGCTCGA
GGGCATGGTCGTCAACCCGCGCAACTTCATGCGGGTCGCCGACGGCTCGGTCGGCTCCGGCTTCGCCTTCGCCACCCTGC
TCGGCCTCGAGCCGTGGTACCCGGAGATGGAGCTGGACGCGAAACTGAACCCGGCGGGCAAGGCCGTCGCCGACTACTAC
CGCACCCAGTGCCAGACCCCCGCCTACTTCACGCTGCCGTTCCTCCCGCTGAACACCCTGTTCACCTCGGGTGTGCACCC
GGCCGACGAGCCCGCCTTCCAGCACGTGTTCGAGGACAACGTGCTCGGCCGGTCGGGCACCCCGGGCGCGCCGGTGCTCA
TCGCCTCGTGCGCGGCCGACGATTCGTTCATGTCGCTGGTGCCCGCCCGCGACGCCCGCGAACTCGCCGACACCTACCGG
GCGGCCGGCGCCGACGTCACCTACGCGCCCACCGACTGCAGCATGGTCACCATGCTGACCAACCTCTACCAGTGGGGCAC
GGACCTGTTCGGCATGCAGACCATCGACTGGCTCGACAGCCGGTTCGAGTGA

Upstream 100 bases:

>100_bases
GAAACGCATCGGCCGCTGCTGACCATTCCGCAGCTGCTCGAATCGGCGGCCAGGGGCCTGCGAATCACTCCCGCGGAGAC
GGAAATGGCGGTGCGCTGAC

Downstream 100 bases:

>100_bases
CGCGGTGACGGAGGCTCCCCCGGGCGACGCCGGGGGAGCCTTCGCTCATGCCCGCGGCAATTCGTTGTGCCCGCCGAAGG
CCTTGCGCATCGCCGAGAGC

Product: putative lipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MGWKTITAALAGAALTMSAAGAAVAEPQPPRTPGLNEVFNGYVVGALQGATVASPDEILRGLRADDPFYEEPPLTGAEQP
GTVLKSKKVDVLFTGVKPANLDAYKLMYVTTGLDGVTPIISTGILMIPVDGQPVGEKHLISYQEANDSVGPSCHPSTQWT
GGAPMDGASWSALGPLALMFGKGHAVMISDVGNDADRDPHGVFAGKFAARAQLDGARAALNFTEGGLNPDAQVALFGIAG
GGVGAAFAAELQPTYAPDLDVKSTVLEGMVVNPRNFMRVADGSVGSGFAFATLLGLEPWYPEMELDAKLNPAGKAVADYY
RTQCQTPAYFTLPFLPLNTLFTSGVHPADEPAFQHVFEDNVLGRSGTPGAPVLIASCAADDSFMSLVPARDARELADTYR
AAGADVTYAPTDCSMVTMLTNLYQWGTDLFGMQTIDWLDSRFE

Sequences:

>Translated_443_residues
MGWKTITAALAGAALTMSAAGAAVAEPQPPRTPGLNEVFNGYVVGALQGATVASPDEILRGLRADDPFYEEPPLTGAEQP
GTVLKSKKVDVLFTGVKPANLDAYKLMYVTTGLDGVTPIISTGILMIPVDGQPVGEKHLISYQEANDSVGPSCHPSTQWT
GGAPMDGASWSALGPLALMFGKGHAVMISDVGNDADRDPHGVFAGKFAARAQLDGARAALNFTEGGLNPDAQVALFGIAG
GGVGAAFAAELQPTYAPDLDVKSTVLEGMVVNPRNFMRVADGSVGSGFAFATLLGLEPWYPEMELDAKLNPAGKAVADYY
RTQCQTPAYFTLPFLPLNTLFTSGVHPADEPAFQHVFEDNVLGRSGTPGAPVLIASCAADDSFMSLVPARDARELADTYR
AAGADVTYAPTDCSMVTMLTNLYQWGTDLFGMQTIDWLDSRFE
>Mature_442_residues
GWKTITAALAGAALTMSAAGAAVAEPQPPRTPGLNEVFNGYVVGALQGATVASPDEILRGLRADDPFYEEPPLTGAEQPG
TVLKSKKVDVLFTGVKPANLDAYKLMYVTTGLDGVTPIISTGILMIPVDGQPVGEKHLISYQEANDSVGPSCHPSTQWTG
GAPMDGASWSALGPLALMFGKGHAVMISDVGNDADRDPHGVFAGKFAARAQLDGARAALNFTEGGLNPDAQVALFGIAGG
GVGAAFAAELQPTYAPDLDVKSTVLEGMVVNPRNFMRVADGSVGSGFAFATLLGLEPWYPEMELDAKLNPAGKAVADYYR
TQCQTPAYFTLPFLPLNTLFTSGVHPADEPAFQHVFEDNVLGRSGTPGAPVLIASCAADDSFMSLVPARDARELADTYRA
AGADVTYAPTDCSMVTMLTNLYQWGTDLFGMQTIDWLDSRFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005152 [H]

Pfam domain/function: PF03583 LIP [H]

EC number: NA

Molecular weight: Translated: 46533; Mature: 46402

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWKTITAALAGAALTMSAAGAAVAEPQPPRTPGLNEVFNGYVVGALQGATVASPDEILR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCHHHHHH
GLRADDPFYEEPPLTGAEQPGTVLKSKKVDVLFTGVKPANLDAYKLMYVTTGLDGVTPII
HCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCHHH
STGILMIPVDGQPVGEKHLISYQEANDSVGPSCHPSTQWTGGAPMDGASWSALGPLALMF
HCCEEEEEECCCCCCHHHEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEEE
GKGHAVMISDVGNDADRDPHGVFAGKFAARAQLDGARAALNFTEGGLNPDAQVALFGIAG
CCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECC
GGVGAAFAAELQPTYAPDLDVKSTVLEGMVVNPRNFMRVADGSVGSGFAFATLLGLEPWY
CCCCHHHHHHCCCCCCCCCCHHHHHHCCEEECCHHHEEEECCCCCCCHHHHHHHCCCCCC
PEMELDAKLNPAGKAVADYYRTQCQTPAYFTLPFLPLNTLFTSGVHPADEPAFQHVFEDN
CCEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHCC
VLGRSGTPGAPVLIASCAADDSFMSLVPARDARELADTYRAAGADVTYAPTDCSMVTMLT
CCCCCCCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHH
NLYQWGTDLFGMQTIDWLDSRFE
HHHHHCCHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
GWKTITAALAGAALTMSAAGAAVAEPQPPRTPGLNEVFNGYVVGALQGATVASPDEILR
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCHHHHHH
GLRADDPFYEEPPLTGAEQPGTVLKSKKVDVLFTGVKPANLDAYKLMYVTTGLDGVTPII
HCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCHHH
STGILMIPVDGQPVGEKHLISYQEANDSVGPSCHPSTQWTGGAPMDGASWSALGPLALMF
HCCEEEEEECCCCCCHHHEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEEE
GKGHAVMISDVGNDADRDPHGVFAGKFAARAQLDGARAALNFTEGGLNPDAQVALFGIAG
CCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECC
GGVGAAFAAELQPTYAPDLDVKSTVLEGMVVNPRNFMRVADGSVGSGFAFATLLGLEPWY
CCCCHHHHHHCCCCCCCCCCHHHHHHCCEEECCHHHEEEECCCCCCCHHHHHHHCCCCCC
PEMELDAKLNPAGKAVADYYRTQCQTPAYFTLPFLPLNTLFTSGVHPADEPAFQHVFEDN
CCEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHCC
VLGRSGTPGAPVLIASCAADDSFMSLVPARDARELADTYRAAGADVTYAPTDCSMVTMLT
CCCCCCCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHH
NLYQWGTDLFGMQTIDWLDSRFE
HHHHHCCHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]