Click here to switch to the map view.

The map label for this gene is 54027414

Identifier: 54027414

GI number: 54027414

Start: 5758490

End: 5758786

Strand: Reverse

Name: 54027414

Synonym: nfa54400

Alternate gene names: NA

Gene position: 5758786-5758490 (Counterclockwise)

Preceding gene: 54027415

Following gene: 54027411

Centisome position: 95.64

GC content: 69.02

Gene sequence:

>297_bases
GTGCGCAGGGGTGAGCTCTGGAGCTATCACCCGCACGGGTCCACACGGCAGCGCACCGTCGTGCTCATCAGCAGCGACGG
CATCAACGAATCCGCCCGGCAATGGTTGATCGCGGCCGAGGTCCTCGACGACGACCCGCAGGACATCCTCGCCGTCGCGG
TACCCGATCGTGGCTGGGTGCACGCGGGCAACATCGGCCGGATCTACCGGGGCTGGCTGGCCGAGCGCATCGACGACATG
GACGCCGAGGTGCTGGAACGCCTCGACACCGCCCTCCGCGCGGCGATGGACCTCTGA

Upstream 100 bases:

>100_bases
GCGGTGCGCACCGGCGTCGGCCCGCTGCCCGAGCCCGCCACCATCGCCGCGGCGGCCGCGGCCGACGAAGCGGAACTGGC
CGCCGCCGAGGAGGCGATGC

Downstream 100 bases:

>100_bases
CCACCGGCGGTTACATCGCCACCTCGAGTTCCACCGCCGCCGTCGACCCGTCGGCGAGCCCTTCGGCGGTCCGCACCGCC
TTCTTCACCGGCAGCACATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MRRGELWSYHPHGSTRQRTVVLISSDGINESARQWLIAAEVLDDDPQDILAVAVPDRGWVHAGNIGRIYRGWLAERIDDM
DAEVLERLDTALRAAMDL

Sequences:

>Translated_98_residues
MRRGELWSYHPHGSTRQRTVVLISSDGINESARQWLIAAEVLDDDPQDILAVAVPDRGWVHAGNIGRIYRGWLAERIDDM
DAEVLERLDTALRAAMDL
>Mature_98_residues
MRRGELWSYHPHGSTRQRTVVLISSDGINESARQWLIAAEVLDDDPQDILAVAVPDRGWVHAGNIGRIYRGWLAERIDDM
DAEVLERLDTALRAAMDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11095; Mature: 11095

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGELWSYHPHGSTRQRTVVLISSDGINESARQWLIAAEVLDDDPQDILAVAVPDRGWV
CCCCCCCEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEE
HAGNIGRIYRGWLAERIDDMDAEVLERLDTALRAAMDL
EECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRGELWSYHPHGSTRQRTVVLISSDGINESARQWLIAAEVLDDDPQDILAVAVPDRGWV
CCCCCCCEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEE
HAGNIGRIYRGWLAERIDDMDAEVLERLDTALRAAMDL
EECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA