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The map label for this gene is hspR [H]

Identifier: 54027380

GI number: 54027380

Start: 5711249

End: 5711650

Strand: Reverse

Name: hspR [H]

Synonym: nfa54060

Alternate gene names: 54027380

Gene position: 5711650-5711249 (Counterclockwise)

Preceding gene: 54027381

Following gene: 54027379

Centisome position: 94.86

GC content: 68.66

Gene sequence:

>402_bases
GTGATGTCCACTGATCCGAAGAAGGCGTCCGGCGGGGCGCGCGGCGAGTTCTTCATGATCTCGGTCGCGGCCCAGTTGGC
AGGTATGCACGCGCAGACACTGCGCACCTACGACCGGCTCGGACTGGTCACGCCGCAACGCACTTCGGGCGGCGGGCGGC
GCTACTCGGCCCGGGATGTCGAGCTGTTGCGCGAGGTGCAGCGGCTGTCCCAGGACGAGGGCGTCAACCTGGCGGGCATC
AAGCGCATCATCGAGCTCACCAATCAGGTGGAGCGGTTGCAGCAGGAGGTCTCCGAGCTGCGGGCGGAGCTCGACCGGGT
CCGGTCCGGCTACCGGCCGGATCTGTCGCCGCCGCAACGGAGTACGGCGCTGGTGGTGTGGAAGCCACGGCATCAGCGCT
GA

Upstream 100 bases:

>100_bases
TACCGCAGAAACTGGACGACGATGCTCTGGAAGCGCTCGAGCGCTACCGGGAAGCGGAGAAGGCCAGCGGATTCGATCCG
CGTGCGGGATGGGCAGGTGC

Downstream 100 bases:

>100_bases
GCACGGTCGAGGGCCGGATCGCATCGGGCGATCCGGCCCTCGTCGTCTCCGCGGAGGTCGCCGGGGTCATCCGTGAGGAG
ACCGTTCGGTACCGGCGAAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MMSTDPKKASGGARGEFFMISVAAQLAGMHAQTLRTYDRLGLVTPQRTSGGGRRYSARDVELLREVQRLSQDEGVNLAGI
KRIIELTNQVERLQQEVSELRAELDRVRSGYRPDLSPPQRSTALVVWKPRHQR

Sequences:

>Translated_133_residues
MMSTDPKKASGGARGEFFMISVAAQLAGMHAQTLRTYDRLGLVTPQRTSGGGRRYSARDVELLREVQRLSQDEGVNLAGI
KRIIELTNQVERLQQEVSELRAELDRVRSGYRPDLSPPQRSTALVVWKPRHQR
>Mature_133_residues
MMSTDPKKASGGARGEFFMISVAAQLAGMHAQTLRTYDRLGLVTPQRTSGGGRRYSARDVELLREVQRLSQDEGVNLAGI
KRIIELTNQVERLQQEVSELRAELDRVRSGYRPDLSPPQRSTALVVWKPRHQR

Specific function: Binds to three inverted repeats (IR1-IR3) in the promoter region of the dnaK operon [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 15001; Mature: 15001

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSTDPKKASGGARGEFFMISVAAQLAGMHAQTLRTYDRLGLVTPQRTSGGGRRYSARDV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
ELLREVQRLSQDEGVNLAGIKRIIELTNQVERLQQEVSELRAELDRVRSGYRPDLSPPQR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
STALVVWKPRHQR
CCEEEEECCCCCC
>Mature Secondary Structure
MMSTDPKKASGGARGEFFMISVAAQLAGMHAQTLRTYDRLGLVTPQRTSGGGRRYSARDV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
ELLREVQRLSQDEGVNLAGIKRIIELTNQVERLQQEVSELRAELDRVRSGYRPDLSPPQR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
STALVVWKPRHQR
CCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8801421; 12000953 [H]