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The map label for this gene is 54027370

Identifier: 54027370

GI number: 54027370

Start: 5699503

End: 5700225

Strand: Reverse

Name: 54027370

Synonym: nfa53960

Alternate gene names: NA

Gene position: 5700225-5699503 (Counterclockwise)

Preceding gene: 54027371

Following gene: 54027369

Centisome position: 94.67

GC content: 76.49

Gene sequence:

>723_bases
GTGTCTGATCGGCGGGTGCGGTCCGATCGGCGGGTGCGCCCGTTGCGCGCGGGCTTCCTCGCGGCCGCCGCGGTGACCGT
CTACGGCGCCGCCACCGGCCGCGACACGCTCCAGTGGCTGGCCAAACCGCTGATGATGCCGCTGCTGGCCGCCGACGTGG
CCACCGGCGGCGCCGACATCGAGCCGGGCGAGCGCACCGTGCTGCTCGCCGCCCTCGGCGCCGCCACCGTCGGCGACGTC
CTGCTCATCGACCCCGACGACGACCGCCGCCTGGTCGCGGGCGCCGCCGCCTTCGCCGTCATGCAGACCGGTTACGCCAC
CCTGTGGTGGCGGCGCGGCGCCCGCCCAACCCGCCCCGTCACCGTGCAACGGCTGGCCGCCTGGCTCGGCGCCGCCGCCC
TCCTGCGGGCGAAGGCACCCACCGTCGCCCTCCCCCTCACCGCCTACGGCGCCACCCTCGGCACCGCGGGCGTCCTGGCG
TCGGACCCCGAACTCGCCCCCGCGGCCCTGACCGTCGGCGGCCTCAACCTCCCCGACTCCGACCCCCGCAGCCGCCTCGC
CCTCGGCTCCCTGCTGTTCACCCTCTCCGACGGCCTCATCGTGCTGCGCCGAATCTTCGCCCGCAGCACCCGATCCCGCC
GCACCACCGAAGCCGTCATCCTCACCACCTACGCCGCCGCCCAATACCTCCTCGCCGACCCCCGAGCCCACACCCGCCCC
TGA

Upstream 100 bases:

>100_bases
AAGGGCGGTCAGCTCGCGCTGCTGCTCGGCTTCGGCGCCGGGCTGAGCTACGCGGGCCAGGTCGTCACCCTGCCGCCCGC
CCCGAAAGAGGCCAGCTTCA

Downstream 100 bases:

>100_bases
ACCCACCGTTGTCCCCCCTCGGGCGGGTTGGATAGTCTCGACAGAGACCTGATCGGCCCGGATCACGGAGGGGGAGCGGA
TGCGGCGTGTGATGGTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSDRRVRSDRRVRPLRAGFLAAAAVTVYGAATGRDTLQWLAKPLMMPLLAADVATGGADIEPGERTVLLAALGAATVGDV
LLIDPDDDRRLVAGAAAFAVMQTGYATLWWRRGARPTRPVTVQRLAAWLGAAALLRAKAPTVALPLTAYGATLGTAGVLA
SDPELAPAALTVGGLNLPDSDPRSRLALGSLLFTLSDGLIVLRRIFARSTRSRRTTEAVILTTYAAAQYLLADPRAHTRP

Sequences:

>Translated_240_residues
MSDRRVRSDRRVRPLRAGFLAAAAVTVYGAATGRDTLQWLAKPLMMPLLAADVATGGADIEPGERTVLLAALGAATVGDV
LLIDPDDDRRLVAGAAAFAVMQTGYATLWWRRGARPTRPVTVQRLAAWLGAAALLRAKAPTVALPLTAYGATLGTAGVLA
SDPELAPAALTVGGLNLPDSDPRSRLALGSLLFTLSDGLIVLRRIFARSTRSRRTTEAVILTTYAAAQYLLADPRAHTRP
>Mature_239_residues
SDRRVRSDRRVRPLRAGFLAAAAVTVYGAATGRDTLQWLAKPLMMPLLAADVATGGADIEPGERTVLLAALGAATVGDVL
LIDPDDDRRLVAGAAAFAVMQTGYATLWWRRGARPTRPVTVQRLAAWLGAAALLRAKAPTVALPLTAYGATLGTAGVLAS
DPELAPAALTVGGLNLPDSDPRSRLALGSLLFTLSDGLIVLRRIFARSTRSRRTTEAVILTTYAAAQYLLADPRAHTRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25316; Mature: 25184

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRRVRSDRRVRPLRAGFLAAAAVTVYGAATGRDTLQWLAKPLMMPLLAADVATGGADI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
EPGERTVLLAALGAATVGDVLLIDPDDDRRLVAGAAAFAVMQTGYATLWWRRGARPTRPV
CCCCCEEEEEECCCHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
TVQRLAAWLGAAALLRAKAPTVALPLTAYGATLGTAGVLASDPELAPAALTVGGLNLPDS
HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCC
DPRSRLALGSLLFTLSDGLIVLRRIFARSTRSRRTTEAVILTTYAAAQYLLADPRAHTRP
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDRRVRSDRRVRPLRAGFLAAAAVTVYGAATGRDTLQWLAKPLMMPLLAADVATGGADI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
EPGERTVLLAALGAATVGDVLLIDPDDDRRLVAGAAAFAVMQTGYATLWWRRGARPTRPV
CCCCCEEEEEECCCHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
TVQRLAAWLGAAALLRAKAPTVALPLTAYGATLGTAGVLASDPELAPAALTVGGLNLPDS
HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCC
DPRSRLALGSLLFTLSDGLIVLRRIFARSTRSRRTTEAVILTTYAAAQYLLADPRAHTRP
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA