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The map label for this gene is 54027346

Identifier: 54027346

GI number: 54027346

Start: 5675317

End: 5677920

Strand: Reverse

Name: 54027346

Synonym: nfa53720

Alternate gene names: NA

Gene position: 5677920-5675317 (Counterclockwise)

Preceding gene: 54027347

Following gene: 54027345

Centisome position: 94.3

GC content: 72.5

Gene sequence:

>2604_bases
ATGGCTCGGAATTGGCCGATGATCGAGCGCGAGACCGAGTTCGAGACCATCCGCGCGGCGCTCACGGGCCCCGACTACGT
CGGCGCCGTGCTCACCGGCGACGCGGGGGTGGGCAAGACGACACTGGCGCGGCAGGCCGCCGCGGCGGTGGGCGGGCGCA
TCCGCTGGGTGGCGGGCACCGAATCCGCGCGCGGCATCCCGCTCGGGGTGTTCGCGCACATGGTGGGGGTGTACACCGCG
CACGATCCGGTCACCTTCATGTCGGCGGCGCGCGAGGCGTTGCTCGCCGACGGGGCCACCATCATCGGTGTCGACGACGC
CCATCTGCTGGACCAGCTCTCGGCCACCCTGTTGCTGCAGTTGGCCATCGACAAGGCCGCGCACGTGGTCGCGACCGTGC
GCAGCGGCGTGCCGGTGCCGGACGCGATCACCTCGCTGTGGAAGGACGGGCACCTGCTGCGGGTGGACCTGAAACCGTTC
ACCCAGCGCCAGAGCGTCGAGCTGGTCGAGTCGATGCTGGGCGGGCAGCTCGAGGGCTTCACCGCCAATCTGATGTGGGA
GTCCTCCGGCGGAAACGCCCTGTTCCTACGGCATCTGGTGGAAGGCGCGCTGGAAGCGGGCACGCTGCGGCAGGTCAACG
GCGTGTGGCAGCTGCGCGGGCGTGCCGCGGTCACCTCGGAGTTGGCCGCGTTGCTCGAGGATCGGGTCGAGCAGCTGCCC
GAACCGGTGCTGCGGGTGCTCGAGCTGCTCACCTTCTGTGAGCCGATGGATCTGGACGTGCTGGCCGAGCTGGCCGGTGA
GGACGCGGTGGAGGCGGCCGAAACCCGTGGCGTCATCCGGGTTGTCGAGCACGGCCACGAGCTCACCGTGCGCTACAACC
ACCCGCTCTTCGGCGAGGTGATCCGGCGCAGGCTCGGTATCGCCTCGGCGCGCAGGCTGCGGGGGCGGTTGTTCTCGGCG
TTGCAGCAGCGGCCGATCAAGTCCGCCGCCGAACGCATCCGGCTGGCCGAATTGGCGTTGGACTCGGACAAATCCGCTGA
TCTGGAGCTGTTCGAGGCCGCCGCCGCCGACGCCATCGCGCTGGCCGACCTGCCGCTGGGCGAGCGGTTCGCGCGGGCGG
CGGTGGAGCGGCGCGGCGGGGTGGAGGCGGCCGATCTGCTGGCCAGGGCGCTGCTGTGGCAAGGGCATCGGATCGAGGCC
GAGCGGACGCTGGCCGGGTTCGATCCCGAGCAGCTCACCGAGGTGCAATTGGCCAACTGGGGCGGCACGCGGGTGTCGAA
CCTGTTGTGGGCCATGGGCGATGCCGACCGGGCCGACGAGGTGCTCGCGCTGGTGCGGGCCAAGGTCCGCCATCCCAAGA
TCGTCGCCACGTTGGCCGGGCTGGCCTCGGCGTGTGCGGTGAACGAGAACCGCCTCGACGACGCGATCGCCGAGGCCGAG
ACGGTGATGGGTGATCCGGGCGCGCCGCCGTGGGCGGTGTGGTGGGCGGCCTTCGGCGGCGGGCTGGCGCTGGCGCTGAT
GGGCCGCGGCGCCGAGGCGAAACGCTACGCGGCGCGCGGGCACGAGGTGGACAAGGCCATCGACGGACTCAACCGTTTCA
TGTCCACGCACGCGGAGGTGCTCGCGCTGATCTACACCGGCGAGCTGGCGGCCGCGCGGCAGTGCGCGGCACCGCGTTTC
AGCTATTCCGAGCCGGGCCAGTACCTGGCGTGGGGCATGTCGAAGATCCTGCAGGGCACCGTCGACGTCGCGCAGGGTCG
GTTCCCCGACGGTATCGAACATCTCGAGCAGGCGCTGGCCGCGTTGACCGCCGAAGGCGCTGCCGCATGGACGTTTCCGG
CGCGGATCCGGTTGGCCGAGGCCTACGCCGCGCTGGGTCGGGCGGGGGAGGCGGCCGAGTCGATCGCCGAGGCGAGCAGG
CGCGGCGGCAGGCACAGCGCCGTGTACGAACCGCAGCTGGCGATCGCCCGGGCGTGCGTGGCCGCCGCCGAAGGCACGGT
CAGCACGGCGGTGCGGCTCGCGATGGCGGCCGCCGATGCCGCGGCCCGCGCGCACCAGTACGCCATCGAGGCCACCGCCC
TGCACGTGGCCGCGCGATTCGGTGATCCGGCGGTGGCCGACCGGCTCACCGAGTTGGCCGGGCGCGTGGACGGCCGCCTT
GTGTCGTTGCAGGCCGCCCACGCCCGTGCCCTCGCCGCCCACGACGGTCCCGGATTGGATTCGGCCGCAGCGGGTTTCGA
ACAGATCGGCGCGCTGCTCTCGGCCGCCGACGCCGCCGCGCAAGCCGCCTCCGCGCACGAACGCGCCGGTGACCGTCGGA
ACGTGCTGGAATCCGCGGCCACCGCCAACCGGCTGGCCGCGGCCTGCGGCGGCGCGAGCACCCCCGCCCTCCGGGAGGCG
GCCCAGCCGCTCCCGCTCACCGTCCGGGAACGGGAGATCGCCAACCTGGTGGCCGCGGGCATGTCCAATCGGCAGATCGC
CGACCGGCTCACCGTCTCGGTGCGCACCGTCGAGGGCCACCTCTACCGCGCCTGCATGAAGATGGACGTCACCGATCGGG
AATCCCTCGGCGCCCTCATCCGCGGCGAGAACGCGGGCCGCTGA

Upstream 100 bases:

>100_bases
CGATCGTGCGCCACGACGTGCTCGGCTGAGCCACGCCGGGCTCGGCCCGGCCTGCGCCGAGTTCCGCGCGCGCGGGGCGG
TGCCGAACTACAGTTGGTAC

Downstream 100 bases:

>100_bases
TTCCGCTCGGCCGCGCCCGCCACTAGGCTGGGCGGACCCCAGCGGTGCTCTTCGGGAGGGGTCGCGATGCTGAGACGGGC
GGTTCTGCTCGGTGCGGTGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; TPR Repeat-Containing Protein; Regulatory Protein; Regulatory Protein LuxR; Response Regulator Receiver Protein; Transcriptional Regulator; AAA ATPase; Transcriptional Regulator LuxR Family Protein; LuxR Transcriptional Regulator; Luxr Family Transcriptional Regulator

Number of amino acids: Translated: 867; Mature: 866

Protein sequence:

>867_residues
MARNWPMIERETEFETIRAALTGPDYVGAVLTGDAGVGKTTLARQAAAAVGGRIRWVAGTESARGIPLGVFAHMVGVYTA
HDPVTFMSAAREALLADGATIIGVDDAHLLDQLSATLLLQLAIDKAAHVVATVRSGVPVPDAITSLWKDGHLLRVDLKPF
TQRQSVELVESMLGGQLEGFTANLMWESSGGNALFLRHLVEGALEAGTLRQVNGVWQLRGRAAVTSELAALLEDRVEQLP
EPVLRVLELLTFCEPMDLDVLAELAGEDAVEAAETRGVIRVVEHGHELTVRYNHPLFGEVIRRRLGIASARRLRGRLFSA
LQQRPIKSAAERIRLAELALDSDKSADLELFEAAAADAIALADLPLGERFARAAVERRGGVEAADLLARALLWQGHRIEA
ERTLAGFDPEQLTEVQLANWGGTRVSNLLWAMGDADRADEVLALVRAKVRHPKIVATLAGLASACAVNENRLDDAIAEAE
TVMGDPGAPPWAVWWAAFGGGLALALMGRGAEAKRYAARGHEVDKAIDGLNRFMSTHAEVLALIYTGELAAARQCAAPRF
SYSEPGQYLAWGMSKILQGTVDVAQGRFPDGIEHLEQALAALTAEGAAAWTFPARIRLAEAYAALGRAGEAAESIAEASR
RGGRHSAVYEPQLAIARACVAAAEGTVSTAVRLAMAAADAAARAHQYAIEATALHVAARFGDPAVADRLTELAGRVDGRL
VSLQAAHARALAAHDGPGLDSAAAGFEQIGALLSAADAAAQAASAHERAGDRRNVLESAATANRLAAACGGASTPALREA
AQPLPLTVREREIANLVAAGMSNRQIADRLTVSVRTVEGHLYRACMKMDVTDRESLGALIRGENAGR

Sequences:

>Translated_867_residues
MARNWPMIERETEFETIRAALTGPDYVGAVLTGDAGVGKTTLARQAAAAVGGRIRWVAGTESARGIPLGVFAHMVGVYTA
HDPVTFMSAAREALLADGATIIGVDDAHLLDQLSATLLLQLAIDKAAHVVATVRSGVPVPDAITSLWKDGHLLRVDLKPF
TQRQSVELVESMLGGQLEGFTANLMWESSGGNALFLRHLVEGALEAGTLRQVNGVWQLRGRAAVTSELAALLEDRVEQLP
EPVLRVLELLTFCEPMDLDVLAELAGEDAVEAAETRGVIRVVEHGHELTVRYNHPLFGEVIRRRLGIASARRLRGRLFSA
LQQRPIKSAAERIRLAELALDSDKSADLELFEAAAADAIALADLPLGERFARAAVERRGGVEAADLLARALLWQGHRIEA
ERTLAGFDPEQLTEVQLANWGGTRVSNLLWAMGDADRADEVLALVRAKVRHPKIVATLAGLASACAVNENRLDDAIAEAE
TVMGDPGAPPWAVWWAAFGGGLALALMGRGAEAKRYAARGHEVDKAIDGLNRFMSTHAEVLALIYTGELAAARQCAAPRF
SYSEPGQYLAWGMSKILQGTVDVAQGRFPDGIEHLEQALAALTAEGAAAWTFPARIRLAEAYAALGRAGEAAESIAEASR
RGGRHSAVYEPQLAIARACVAAAEGTVSTAVRLAMAAADAAARAHQYAIEATALHVAARFGDPAVADRLTELAGRVDGRL
VSLQAAHARALAAHDGPGLDSAAAGFEQIGALLSAADAAAQAASAHERAGDRRNVLESAATANRLAAACGGASTPALREA
AQPLPLTVREREIANLVAAGMSNRQIADRLTVSVRTVEGHLYRACMKMDVTDRESLGALIRGENAGR
>Mature_866_residues
ARNWPMIERETEFETIRAALTGPDYVGAVLTGDAGVGKTTLARQAAAAVGGRIRWVAGTESARGIPLGVFAHMVGVYTAH
DPVTFMSAAREALLADGATIIGVDDAHLLDQLSATLLLQLAIDKAAHVVATVRSGVPVPDAITSLWKDGHLLRVDLKPFT
QRQSVELVESMLGGQLEGFTANLMWESSGGNALFLRHLVEGALEAGTLRQVNGVWQLRGRAAVTSELAALLEDRVEQLPE
PVLRVLELLTFCEPMDLDVLAELAGEDAVEAAETRGVIRVVEHGHELTVRYNHPLFGEVIRRRLGIASARRLRGRLFSAL
QQRPIKSAAERIRLAELALDSDKSADLELFEAAAADAIALADLPLGERFARAAVERRGGVEAADLLARALLWQGHRIEAE
RTLAGFDPEQLTEVQLANWGGTRVSNLLWAMGDADRADEVLALVRAKVRHPKIVATLAGLASACAVNENRLDDAIAEAET
VMGDPGAPPWAVWWAAFGGGLALALMGRGAEAKRYAARGHEVDKAIDGLNRFMSTHAEVLALIYTGELAAARQCAAPRFS
YSEPGQYLAWGMSKILQGTVDVAQGRFPDGIEHLEQALAALTAEGAAAWTFPARIRLAEAYAALGRAGEAAESIAEASRR
GGRHSAVYEPQLAIARACVAAAEGTVSTAVRLAMAAADAAARAHQYAIEATALHVAARFGDPAVADRLTELAGRVDGRLV
SLQAAHARALAAHDGPGLDSAAAGFEQIGALLSAADAAAQAASAHERAGDRRNVLESAATANRLAAACGGASTPALREAA
QPLPLTVREREIANLVAAGMSNRQIADRLTVSVRTVEGHLYRACMKMDVTDRESLGALIRGENAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91805; Mature: 91674

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNWPMIERETEFETIRAALTGPDYVGAVLTGDAGVGKTTLARQAAAAVGGRIRWVAGT
CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECC
ESARGIPLGVFAHMVGVYTAHDPVTFMSAAREALLADGATIIGVDDAHLLDQLSATLLLQ
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
LAIDKAAHVVATVRSGVPVPDAITSLWKDGHLLRVDLKPFTQRQSVELVESMLGGQLEGF
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCE
TANLMWESSGGNALFLRHLVEGALEAGTLRQVNGVWQLRGRAAVTSELAALLEDRVEQLP
EEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC
EPVLRVLELLTFCEPMDLDVLAELAGEDAVEAAETRGVIRVVEHGHELTVRYNHPLFGEV
HHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHCCCEEEEEECCCHHHHH
IRRRLGIASARRLRGRLFSALQQRPIKSAAERIRLAELALDSDKSADLELFEAAAADAIA
HHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHE
LADLPLGERFARAAVERRGGVEAADLLARALLWQGHRIEAERTLAGFDPEQLTEVQLANW
EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCC
GGTRVSNLLWAMGDADRADEVLALVRAKVRHPKIVATLAGLASACAVNENRLDDAIAEAE
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TVMGDPGAPPWAVWWAAFGGGLALALMGRGAEAKRYAARGHEVDKAIDGLNRFMSTHAEV
HHCCCCCCCHHHHHHHHHCCHHEEHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LALIYTGELAAARQCAAPRFSYSEPGQYLAWGMSKILQGTVDVAQGRFPDGIEHLEQALA
HHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ALTAEGAAAWTFPARIRLAEAYAALGRAGEAAESIAEASRRGGRHSAVYEPQLAIARACV
HHHCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AAAEGTVSTAVRLAMAAADAAARAHQYAIEATALHVAARFGDPAVADRLTELAGRVDGRL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
VSLQAAHARALAAHDGPGLDSAAAGFEQIGALLSAADAAAQAASAHERAGDRRNVLESAA
EEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TANRLAAACGGASTPALREAAQPLPLTVREREIANLVAAGMSNRQIADRLTVSVRTVEGH
HHHHHHHHCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHEEEEEEHHHH
LYRACMKMDVTDRESLGALIRGENAGR
HHHHHHHCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARNWPMIERETEFETIRAALTGPDYVGAVLTGDAGVGKTTLARQAAAAVGGRIRWVAGT
CCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECC
ESARGIPLGVFAHMVGVYTAHDPVTFMSAAREALLADGATIIGVDDAHLLDQLSATLLLQ
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
LAIDKAAHVVATVRSGVPVPDAITSLWKDGHLLRVDLKPFTQRQSVELVESMLGGQLEGF
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCE
TANLMWESSGGNALFLRHLVEGALEAGTLRQVNGVWQLRGRAAVTSELAALLEDRVEQLP
EEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC
EPVLRVLELLTFCEPMDLDVLAELAGEDAVEAAETRGVIRVVEHGHELTVRYNHPLFGEV
HHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHCCCEEEEEECCCHHHHH
IRRRLGIASARRLRGRLFSALQQRPIKSAAERIRLAELALDSDKSADLELFEAAAADAIA
HHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHE
LADLPLGERFARAAVERRGGVEAADLLARALLWQGHRIEAERTLAGFDPEQLTEVQLANW
EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCC
GGTRVSNLLWAMGDADRADEVLALVRAKVRHPKIVATLAGLASACAVNENRLDDAIAEAE
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TVMGDPGAPPWAVWWAAFGGGLALALMGRGAEAKRYAARGHEVDKAIDGLNRFMSTHAEV
HHCCCCCCCHHHHHHHHHCCHHEEHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LALIYTGELAAARQCAAPRFSYSEPGQYLAWGMSKILQGTVDVAQGRFPDGIEHLEQALA
HHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ALTAEGAAAWTFPARIRLAEAYAALGRAGEAAESIAEASRRGGRHSAVYEPQLAIARACV
HHHCCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AAAEGTVSTAVRLAMAAADAAARAHQYAIEATALHVAARFGDPAVADRLTELAGRVDGRL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
VSLQAAHARALAAHDGPGLDSAAAGFEQIGALLSAADAAAQAASAHERAGDRRNVLESAA
EEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TANRLAAACGGASTPALREAAQPLPLTVREREIANLVAAGMSNRQIADRLTVSVRTVEGH
HHHHHHHHCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHEEEEEEHHHH
LYRACMKMDVTDRESLGALIRGENAGR
HHHHHHHCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA