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The map label for this gene is 54027326

Identifier: 54027326

GI number: 54027326

Start: 5658381

End: 5658995

Strand: Reverse

Name: 54027326

Synonym: nfa53520

Alternate gene names: NA

Gene position: 5658995-5658381 (Counterclockwise)

Preceding gene: 54027327

Following gene: 54027325

Centisome position: 93.98

GC content: 73.01

Gene sequence:

>615_bases
ATGACCCAGCATCTTCCGACCGCTGTCCCACACACCGCTGTCCGGCACCCGTCCGCGGTGCGCACCCTGCTCGACAACCG
ACCGTCCTACCTCGGGTTCGGCGCCGCCTGGTTGCTCGGGCACGGCGCCTACGCCCTTTCGCACGGCAGCGATCCCGTCC
TGCGCCTGCCCGCGGCGGTGCCGAGCATCCTGCTCATCACCGGCCTGGTCGCGGCGCTGATCGTCACGAGCGTCGTCTCC
ATGCGGGTACAGCGCACGGCCACCGGGAGCGAGGCGGTCGTCGGCAAACTGCTGGCCGCCTCCTGGCTGGTCGGCTTCGG
TGCGCTGTTCTTCGTCATCACGGCGGTGAGCTCGGTGCTACCCCACGGCGACCTCACGACGCTGCTGTGGCCCGCGGGCT
CCGGCCTCATCGTCGGACTGCTCTACCTCGCGGGCGGCGCCGCCTACCGTGACGTGTTGCAGTACACCCTCGGCGCCTGG
CTCGCGCTCACCTCCACCGCCGCCCTCCTCCTCGACGGGGCGAGCCCGTACTGGGTGCTCGCGGTCGCGGGCGGCGGCAG
CTACCTGCTCGCCGCCGCGCTCGAACCCCGCCGCCGCGCCGCCGCGCTCGCCTGA

Upstream 100 bases:

>100_bases
AGTCGTTCTCGTCGCCGACGAAGGCTGAACCCGTCCCACCCGCTCGCGCTACCGCCCGCCGATCCCTACCCTCCGCCACC
TTCGTCCCAGGAGAACTCCC

Downstream 100 bases:

>100_bases
CCGCTGACCCCCGACAACCCCGCCCGGCACCGGGCGGGGTTGTCGGTTTCGTCCACGACGCGGACGCGTTCCCGACGTAG
GCTGCCGAGCGGTATCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTQHLPTAVPHTAVRHPSAVRTLLDNRPSYLGFGAAWLLGHGAYALSHGSDPVLRLPAAVPSILLITGLVAALIVTSVVS
MRVQRTATGSEAVVGKLLAASWLVGFGALFFVITAVSSVLPHGDLTTLLWPAGSGLIVGLLYLAGGAAYRDVLQYTLGAW
LALTSTAALLLDGASPYWVLAVAGGGSYLLAAALEPRRRAAALA

Sequences:

>Translated_204_residues
MTQHLPTAVPHTAVRHPSAVRTLLDNRPSYLGFGAAWLLGHGAYALSHGSDPVLRLPAAVPSILLITGLVAALIVTSVVS
MRVQRTATGSEAVVGKLLAASWLVGFGALFFVITAVSSVLPHGDLTTLLWPAGSGLIVGLLYLAGGAAYRDVLQYTLGAW
LALTSTAALLLDGASPYWVLAVAGGGSYLLAAALEPRRRAAALA
>Mature_203_residues
TQHLPTAVPHTAVRHPSAVRTLLDNRPSYLGFGAAWLLGHGAYALSHGSDPVLRLPAAVPSILLITGLVAALIVTSVVSM
RVQRTATGSEAVVGKLLAASWLVGFGALFFVITAVSSVLPHGDLTTLLWPAGSGLIVGLLYLAGGAAYRDVLQYTLGAWL
ALTSTAALLLDGASPYWVLAVAGGGSYLLAAALEPRRRAAALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20999; Mature: 20868

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHLPTAVPHTAVRHPSAVRTLLDNRPSYLGFGAAWLLGHGAYALSHGSDPVLRLPAAV
CCCCCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHEECCCCCCEEECCHHH
PSILLITGLVAALIVTSVVSMRVQRTATGSEAVVGKLLAASWLVGFGALFFVITAVSSVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PHGDLTTLLWPAGSGLIVGLLYLAGGAAYRDVLQYTLGAWLALTSTAALLLDGASPYWVL
CCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
AVAGGGSYLLAAALEPRRRAAALA
EEECCCCEEHHHHCCHHHHHHCCC
>Mature Secondary Structure 
TQHLPTAVPHTAVRHPSAVRTLLDNRPSYLGFGAAWLLGHGAYALSHGSDPVLRLPAAV
CCCCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHEECCCCCCEEECCHHH
PSILLITGLVAALIVTSVVSMRVQRTATGSEAVVGKLLAASWLVGFGALFFVITAVSSVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PHGDLTTLLWPAGSGLIVGLLYLAGGAAYRDVLQYTLGAWLALTSTAALLLDGASPYWVL
CCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
AVAGGGSYLLAAALEPRRRAAALA
EEECCCCEEHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA