Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54027248

Identifier: 54027248

GI number: 54027248

Start: 5575217

End: 5576176

Strand: Reverse

Name: 54027248

Synonym: nfa52740

Alternate gene names: NA

Gene position: 5576176-5575217 (Counterclockwise)

Preceding gene: 54027249

Following gene: 54027245

Centisome position: 92.61

GC content: 75.94

Gene sequence:

>960_bases
GTGCCGATGAGTTCGGACGGGAGCAGACCGATCCCGCTGCCCGCCGTCAGCCGCCGCCGCGTGCTGGCCGCCGTGGTGGC
CGTGTTCGCCGCCGCCGGGTGCGCGGCCGGCGAGCGAACGGCCGCGCCGCCGAGTGTCGTCACCACTCTCGCGGGCCCGC
CGCCCGCCACCCCGGACGCGCCACTGCGGATCGCCTACGGCCCGGACCCCGACCACATCGGCGACCTGTATCTCCCCGAG
CGCGGCGCCGCGCCGTATCCCGTGGTCGTGATGGTGCACGGCGGCGGCTGGTCGCAGTGGCGCGACCTCGACGACACCGC
CGGCAACTCCACAGCGCTGGCCCGGCACGGGGTCGCGGTCTGGAACATCGAATACCGCCGGGTGCGCGGCGGCGGTGGCT
GGCCGAGCACGCTCGCCGACGCCGACGACGCCGTGGAGGCGCTCGCGACGGTGGTCCAGGAACGCTCCGGACACCGGCTC
GACCTGGAGCGCGTCCACGTCGCCGGGCATTCCGCCGGTGGGCACCTGGCCGCGTGGGTGGCGGGCAGGCACACGCTGCC
GCCCACGGCGCCGGGTGCGCAGCCGCGCGTCCGGCCGCGCAGCGCGACGCTCATGGCGGGCGTGTTCGATCTCGAACTGG
CGGTGACCCGCGGCCACGACGCCTTCGTCCGCGCCCTGCTCGACGGCGCGCCGGACGAGGTGCCCGACCGCTACCGGATC
GCCTCGCCCATCGCGCACCTGCCCGTCGGCATCCGCATCGACGCGCTGCACGGCGACGCCGACCAGGTCGTCTCGATCGA
GCAGAGCCGCCGCTACATCGCGGCCGCGCGCGCCGCGGGCGACAACGCCCACCTGCACGAGCTGCCCGGCGTCACACACG
CCGACTTCCTCGACGTCGGCTCGCCCGCCTGGGCCGCCGCCCAGCGCGTCATCCTGCACAACATCGACACCCTGGACTGA

Upstream 100 bases:

>100_bases
TCGGTGGCCCGGCTCTCGGCCGTTCCGGCCCGGCATACCCGGCCCGCCGGCGGGACGACGCTCGATACAGTCGGTCGGAC
GACCGACGTGGAGGGAGCCG

Downstream 100 bases:

>100_bases
AACCCTCGGCCGCTGACCCGCTCAGGCGGTGCTGGATTGTGCCTGTGCGGGGGCGGCCTGCGTGGTGATGCTGCGCTGCC
TCCTCCGGCCGCTGACCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Esterase/Lipase-Like Protein; Esterase; Hydrolase; Esterase/Lipase; Dienelactone Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain Protein

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MPMSSDGSRPIPLPAVSRRRVLAAVVAVFAAAGCAAGERTAAPPSVVTTLAGPPPATPDAPLRIAYGPDPDHIGDLYLPE
RGAAPYPVVVMVHGGGWSQWRDLDDTAGNSTALARHGVAVWNIEYRRVRGGGGWPSTLADADDAVEALATVVQERSGHRL
DLERVHVAGHSAGGHLAAWVAGRHTLPPTAPGAQPRVRPRSATLMAGVFDLELAVTRGHDAFVRALLDGAPDEVPDRYRI
ASPIAHLPVGIRIDALHGDADQVVSIEQSRRYIAAARAAGDNAHLHELPGVTHADFLDVGSPAWAAAQRVILHNIDTLD

Sequences:

>Translated_319_residues
MPMSSDGSRPIPLPAVSRRRVLAAVVAVFAAAGCAAGERTAAPPSVVTTLAGPPPATPDAPLRIAYGPDPDHIGDLYLPE
RGAAPYPVVVMVHGGGWSQWRDLDDTAGNSTALARHGVAVWNIEYRRVRGGGGWPSTLADADDAVEALATVVQERSGHRL
DLERVHVAGHSAGGHLAAWVAGRHTLPPTAPGAQPRVRPRSATLMAGVFDLELAVTRGHDAFVRALLDGAPDEVPDRYRI
ASPIAHLPVGIRIDALHGDADQVVSIEQSRRYIAAARAAGDNAHLHELPGVTHADFLDVGSPAWAAAQRVILHNIDTLD
>Mature_318_residues
PMSSDGSRPIPLPAVSRRRVLAAVVAVFAAAGCAAGERTAAPPSVVTTLAGPPPATPDAPLRIAYGPDPDHIGDLYLPER
GAAPYPVVVMVHGGGWSQWRDLDDTAGNSTALARHGVAVWNIEYRRVRGGGGWPSTLADADDAVEALATVVQERSGHRLD
LERVHVAGHSAGGHLAAWVAGRHTLPPTAPGAQPRVRPRSATLMAGVFDLELAVTRGHDAFVRALLDGAPDEVPDRYRIA
SPIAHLPVGIRIDALHGDADQVVSIEQSRRYIAAARAAGDNAHLHELPGVTHADFLDVGSPAWAAAQRVILHNIDTLD

Specific function: Unknown

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33519; Mature: 33388

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSSDGSRPIPLPAVSRRRVLAAVVAVFAAAGCAAGERTAAPPSVVTTLAGPPPATPDA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEECCCCCCCCCC
PLRIAYGPDPDHIGDLYLPERGAAPYPVVVMVHGGGWSQWRDLDDTAGNSTALARHGVAV
CEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCHHHHCCEEE
WNIEYRRVRGGGGWPSTLADADDAVEALATVVQERSGHRLDLERVHVAGHSAGGHLAAWV
EEEEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEE
AGRHTLPPTAPGAQPRVRPRSATLMAGVFDLELAVTRGHDAFVRALLDGAPDEVPDRYRI
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCEEH
ASPIAHLPVGIRIDALHGDADQVVSIEQSRRYIAAARAAGDNAHLHELPGVTHADFLDVG
HCCHHHCCCCEEEEEECCCHHHEEEHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHCCC
SPAWAAAQRVILHNIDTLD
CCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PMSSDGSRPIPLPAVSRRRVLAAVVAVFAAAGCAAGERTAAPPSVVTTLAGPPPATPDA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEECCCCCCCCCC
PLRIAYGPDPDHIGDLYLPERGAAPYPVVVMVHGGGWSQWRDLDDTAGNSTALARHGVAV
CEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCHHHHCCEEE
WNIEYRRVRGGGGWPSTLADADDAVEALATVVQERSGHRLDLERVHVAGHSAGGHLAAWV
EEEEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEE
AGRHTLPPTAPGAQPRVRPRSATLMAGVFDLELAVTRGHDAFVRALLDGAPDEVPDRYRI
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCEEH
ASPIAHLPVGIRIDALHGDADQVVSIEQSRRYIAAARAAGDNAHLHELPGVTHADFLDVG
HCCHHHCCCCEEEEEECCCHHHEEEHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHCCC
SPAWAAAQRVILHNIDTLD
CCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA