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The map label for this gene is 54027114

Identifier: 54027114

GI number: 54027114

Start: 5441390

End: 5442622

Strand: Reverse

Name: 54027114

Synonym: nfa51400

Alternate gene names: NA

Gene position: 5442622-5441390 (Counterclockwise)

Preceding gene: 54027119

Following gene: 54027113

Centisome position: 90.39

GC content: 70.4

Gene sequence:

>1233_bases
ATGAACGAGATTCCCCCGAACGAGGTGGGTCGGCGCGTGCGCGAAATCCGGCTCTGGAGGGGATTGAGTTTGGAAGCGGC
CGCCGGGCTGGCCGGAATCTCCTACGGCTATCTCGGCCGTCTCGAACGTGGTGAGCAAGCCCTCACCAACCGCCGGACTC
TGGAGCACATCGCACAGGCGCTGCGCGTCGCGCCGTCGGAGTTCAACGGCCAGCCGTGGGAGCCCGGCGGTGCGATGACG
TCGGAGGCGCATGCCGGCCTGCTCGCGATCGAGAGTGCCCTGGAGATCTGCGAACTCGGTGAGGACCCGGGCGGCGGGCT
GCGCGAGTGGCCCGCGCTCGAGGCCGATCTGGCGAAGGCCGAGCAGCTCCGCGAAGCCACCGATTACGCGGCGGTCTGCG
CGTTGGCGCCACGCCTGCTGATCGAATTGCACGCGGCCTACGTGCGCCGCCCGGATCTGCGGCCGCAGGTGCTGGTCGGA
CTGATCCGTTGCTACTACCCACTGGCGACCACCGCCAAGCGGCTCGGGGTGCGCGGACTGCCGATCATGATGGTGAAGGC
GGCCCAGTCGTGCGCGGAGGAACTGGCGGCACCGGCGTGGATCGGGTTCGCGTCCTGGCTGCGCGGCATCGTCTCCGGCG
CCATGTCGCGCGAACAGCAGTACCGGCGATCCATCGCCACGGCCGACCGGATCGGCAGCCACCTCGGCGATCCGGAGGTG
GCCCAGGCCTACGGCATGATCCACCTGTCCGCGGCATTGGCCGCCGCCGTACAGCGCGACCGTTCCACCGCGGAAACCCA
CCTGGCCGAAGCCGCGTCGGTCGCCGCACGGCTGGACGAGGAGATCGGCGCCTTCGGCCGCCTCTGGTTCGGGCGGACGA
ATGTCGATGTGTGGCGCGCGTCGATCGGCTTGGAGTTGGGCGACGGCGTCGCTGCCGTGCAACGCGCCGCCCATGTCGCC
GTCGACGCGATTCCGTCACCGTCGCGCCGGGCCAACTACTACGCCGAGGCCGGGTGCGCGCTGCTCGCGGAACCGCGTTA
CCAGGACCGCGGAGTGGAGCTTCTGGTCAAGGCGGAATCACTTGCGCCACAGCAAGTCCGAAGTGACATCTTCGTTCGCG
ACGCCGTGGCGGGCAAGCTGCGCTCCGCTCGACGCGACGCCGCCGGGCGCGAGTTGCGCGGTCTGGCCTGGCGTCTGGGC
ATCGCCCCCGAGTCGCCGCCCCTCCGACCGTGA

Upstream 100 bases:

>100_bases
CCGTGTCGGACGGACGGCCTGTGGAGAAGCGGCGGTCGCGGGTGCGTGGGCCGGTCTACCCTGGGCTGGACGGATCCGAT
GCGCGGAGGGGTGGGGCCGG

Downstream 100 bases:

>100_bases
GCCGTCCGCTCCGCGGCGCCTGTCCTCCGAGGACAGATCCGTCGCGTGCTGCCTCGTAGCGTCCTTCCCGGCACCCGCCC
GGTGTTGTCGCAGCCGCCTT

Product: putative DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MNEIPPNEVGRRVREIRLWRGLSLEAAAGLAGISYGYLGRLERGEQALTNRRTLEHIAQALRVAPSEFNGQPWEPGGAMT
SEAHAGLLAIESALEICELGEDPGGGLREWPALEADLAKAEQLREATDYAAVCALAPRLLIELHAAYVRRPDLRPQVLVG
LIRCYYPLATTAKRLGVRGLPIMMVKAAQSCAEELAAPAWIGFASWLRGIVSGAMSREQQYRRSIATADRIGSHLGDPEV
AQAYGMIHLSAALAAAVQRDRSTAETHLAEAASVAARLDEEIGAFGRLWFGRTNVDVWRASIGLELGDGVAAVQRAAHVA
VDAIPSPSRRANYYAEAGCALLAEPRYQDRGVELLVKAESLAPQQVRSDIFVRDAVAGKLRSARRDAAGRELRGLAWRLG
IAPESPPLRP

Sequences:

>Translated_410_residues
MNEIPPNEVGRRVREIRLWRGLSLEAAAGLAGISYGYLGRLERGEQALTNRRTLEHIAQALRVAPSEFNGQPWEPGGAMT
SEAHAGLLAIESALEICELGEDPGGGLREWPALEADLAKAEQLREATDYAAVCALAPRLLIELHAAYVRRPDLRPQVLVG
LIRCYYPLATTAKRLGVRGLPIMMVKAAQSCAEELAAPAWIGFASWLRGIVSGAMSREQQYRRSIATADRIGSHLGDPEV
AQAYGMIHLSAALAAAVQRDRSTAETHLAEAASVAARLDEEIGAFGRLWFGRTNVDVWRASIGLELGDGVAAVQRAAHVA
VDAIPSPSRRANYYAEAGCALLAEPRYQDRGVELLVKAESLAPQQVRSDIFVRDAVAGKLRSARRDAAGRELRGLAWRLG
IAPESPPLRP
>Mature_410_residues
MNEIPPNEVGRRVREIRLWRGLSLEAAAGLAGISYGYLGRLERGEQALTNRRTLEHIAQALRVAPSEFNGQPWEPGGAMT
SEAHAGLLAIESALEICELGEDPGGGLREWPALEADLAKAEQLREATDYAAVCALAPRLLIELHAAYVRRPDLRPQVLVG
LIRCYYPLATTAKRLGVRGLPIMMVKAAQSCAEELAAPAWIGFASWLRGIVSGAMSREQQYRRSIATADRIGSHLGDPEV
AQAYGMIHLSAALAAAVQRDRSTAETHLAEAASVAARLDEEIGAFGRLWFGRTNVDVWRASIGLELGDGVAAVQRAAHVA
VDAIPSPSRRANYYAEAGCALLAEPRYQDRGVELLVKAESLAPQQVRSDIFVRDAVAGKLRSARRDAAGRELRGLAWRLG
IAPESPPLRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44334; Mature: 44334

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIPPNEVGRRVREIRLWRGLSLEAAAGLAGISYGYLGRLERGEQALTNRRTLEHIAQA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRVAPSEFNGQPWEPGGAMTSEAHAGLLAIESALEICELGEDPGGGLREWPALEADLAKA
HHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
EQLREATDYAAVCALAPRLLIELHAAYVRRPDLRPQVLVGLIRCYYPLATTAKRLGVRGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PIMMVKAAQSCAEELAAPAWIGFASWLRGIVSGAMSREQQYRRSIATADRIGSHLGDPEV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AQAYGMIHLSAALAAAVQRDRSTAETHLAEAASVAARLDEEIGAFGRLWFGRTNVDVWRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SIGLELGDGVAAVQRAAHVAVDAIPSPSRRANYYAEAGCALLAEPRYQDRGVELLVKAES
HHCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCEECCCCCCCCCCEEEEEHHH
LAPQQVRSDIFVRDAVAGKLRSARRDAAGRELRGLAWRLGIAPESPPLRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCC
>Mature Secondary Structure
MNEIPPNEVGRRVREIRLWRGLSLEAAAGLAGISYGYLGRLERGEQALTNRRTLEHIAQA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRVAPSEFNGQPWEPGGAMTSEAHAGLLAIESALEICELGEDPGGGLREWPALEADLAKA
HHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
EQLREATDYAAVCALAPRLLIELHAAYVRRPDLRPQVLVGLIRCYYPLATTAKRLGVRGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PIMMVKAAQSCAEELAAPAWIGFASWLRGIVSGAMSREQQYRRSIATADRIGSHLGDPEV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AQAYGMIHLSAALAAAVQRDRSTAETHLAEAASVAARLDEEIGAFGRLWFGRTNVDVWRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SIGLELGDGVAAVQRAAHVAVDAIPSPSRRANYYAEAGCALLAEPRYQDRGVELLVKAES
HHCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCEECCCCCCCCCCEEEEEHHH
LAPQQVRSDIFVRDAVAGKLRSARRDAAGRELRGLAWRLGIAPESPPLRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA