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The map label for this gene is secE [H]

Identifier: 54027091

GI number: 54027091

Start: 5418775

End: 5419176

Strand: Reverse

Name: secE [H]

Synonym: nfa51170

Alternate gene names: 54027091

Gene position: 5419176-5418775 (Counterclockwise)

Preceding gene: 54027092

Following gene: 54027090

Centisome position: 90.0

GC content: 65.17

Gene sequence:

>402_bases
GTGAGCGACGAGCGGGACACTCGCCACGGCGCGCATGCGGCCGACGACGGCGATGGCACCGCCGCGGTGAGTCGGCCGAG
CGGCAAGCGTTCCGCTCGGCGGACCCGCTCCGTCTCGTCCTCCTCGGCCGATACGGGCGCGGTCGCCACGATCGACCGGC
CGTCGAAGAAGGCGGGAAAGACTGCCGGCAAGGCCACGCGCGAAGGAACGGGCAATCCGTTCAAGCGCCTGATCAAGTTC
CTGCGTGAGGTCATCGCGGAACTGCGCAAGGTGATCTGGCCGAACCGGAAGCAGATGGTCACCTATACGAGCGTTGTTCT
GGTGTTCGTGGTCTTCATGGTCGCGTTCATCAGCGGGTTGGATCTGGCGTTCATCAAGGGTGTCAACTGGCTGTTCGGCT
AG

Upstream 100 bases:

>100_bases
GGCGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTGTCGCCCCTGCCCTGATGCC
AGCGACGAGAGAGGATCGAC

Downstream 100 bases:

>100_bases
CGGCCGTTCGGTTGGGAGGAAGGCGCCGACGCCGGTAGCCGATCCCGGGGCGGACCGGCGGAACATTCCCGCCGCGCCCG
ACCCCGGCACGCAGAGGATG

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSDERDTRHGAHAADDGDGTAAVSRPSGKRSARRTRSVSSSSADTGAVATIDRPSKKAGKTAGKATREGTGNPFKRLIKF
LREVIAELRKVIWPNRKQMVTYTSVVLVFVVFMVAFISGLDLAFIKGVNWLFG

Sequences:

>Translated_133_residues
MSDERDTRHGAHAADDGDGTAAVSRPSGKRSARRTRSVSSSSADTGAVATIDRPSKKAGKTAGKATREGTGNPFKRLIKF
LREVIAELRKVIWPNRKQMVTYTSVVLVFVVFMVAFISGLDLAFIKGVNWLFG
>Mature_132_residues
SDERDTRHGAHAADDGDGTAAVSRPSGKRSARRTRSVSSSSADTGAVATIDRPSKKAGKTAGKATREGTGNPFKRLIKFL
REVIAELRKVIWPNRKQMVTYTSVVLVFVVFMVAFISGLDLAFIKGVNWLFG

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 14427; Mature: 14295

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDERDTRHGAHAADDGDGTAAVSRPSGKRSARRTRSVSSSSADTGAVATIDRPSKKAGK
CCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCHHHCC
TAGKATREGTGNPFKRLIKFLREVIAELRKVIWPNRKQMVTYTSVVLVFVVFMVAFISGL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DLAFIKGVNWLFG
HHHHHHHHHHHCC
>Mature Secondary Structure 
SDERDTRHGAHAADDGDGTAAVSRPSGKRSARRTRSVSSSSADTGAVATIDRPSKKAGK
CCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCHHHCC
TAGKATREGTGNPFKRLIKFLREVIAELRKVIWPNRKQMVTYTSVVLVFVVFMVAFISGL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DLAFIKGVNWLFG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]