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The map label for this gene is nusG [H]

Identifier: 54027090

GI number: 54027090

Start: 5417856

End: 5418677

Strand: Reverse

Name: nusG [H]

Synonym: nfa51160

Alternate gene names: 54027090

Gene position: 5418677-5417856 (Counterclockwise)

Preceding gene: 54027091

Following gene: 54027089

Centisome position: 89.99

GC content: 67.52

Gene sequence:

>822_bases
ATGTACGTGACGACACAGGAAGCGAGTGCCCCAGTGAGCACCCCGGAGAACGACACCAACGACGAGTTCCCGGTCGACGA
CGCGGTGGCCGAGCCCGCCCGCGACGAGGTGGAGGACACCGCGGCCGTCGAAGAGTCTGTGGCCGAAGAGTCTGTGGTCG
AGGAATCCGCGCCCGCTGCCCCCGTCGACGCCGAGCCGGCCGACCCGGTCGCCGAGATGAAGGCCGCGCTGCGGCGCGCC
CCCGGCGACTGGTACGTCATCCACTCCTACGCCGGGTACGAGAACAAGGTGAAGGCCAACCTCGAGACCCGCGTGCAGAA
CCTCGATCTCGAGGACTACATCTTCCAGGTCGAGGTGCCGACCGAAGAGGTCACCGAGATCAAGAACGGCCAGCGCAAGA
ACGTCAACCGCAAGGTGCTGCCCGGCTACATCCTGGTCCGGATGGAACTCAACGACGAGTCGTGGGGCGCGGTGCGCAAC
ACCCCCGGTGTGACCGGTTTCGTCGGCGCCACCTCGCGGCCGTCCCCGCTGTCGATCGACGACGTGGTGAAGTTCCTGGT
GCCCGCCTCGCAGCAGAAGAAGGCGCCCGCCGCCGCGGCTGCCGCGAGCACCGAGACCAGCACCGATGTCGCGCCGAAGC
CGGCCATCGAGGTCGACTTCGAGGTCGGCGAGTCGGTGACGGTGATGGACGGTCCGTTCGCGACCCTGCCCGCCAGCATC
TCCGAGGTGAACGCCGAGCAGCAGAAGCTCAAGGTGCTCGTCTCGATCTTCGGACGCGAGACCCCGGTCGAGCTGGCCTT
CACCCAGGTCGCGAAGATCTAG

Upstream 100 bases:

>100_bases
TAGCGGCCGTTCGGTTGGGAGGAAGGCGCCGACGCCGGTAGCCGATCCCGGGGCGGACCGGCGGAACATTCCCGCCGCGC
CCGACCCCGGCACGCAGAGG

Downstream 100 bases:

>100_bases
TTGCTTCCGTCGCGGTTCCCAGGACCGGCGACGGGATGATTCGGCCCGCGCCGCGGGTTCGAATTCCCCAGGGCTTGCAA
AGAGCAAGGACACCAACACC

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MYVTTQEASAPVSTPENDTNDEFPVDDAVAEPARDEVEDTAAVEESVAEESVVEESAPAAPVDAEPADPVAEMKAALRRA
PGDWYVIHSYAGYENKVKANLETRVQNLDLEDYIFQVEVPTEEVTEIKNGQRKNVNRKVLPGYILVRMELNDESWGAVRN
TPGVTGFVGATSRPSPLSIDDVVKFLVPASQQKKAPAAAAAASTETSTDVAPKPAIEVDFEVGESVTVMDGPFATLPASI
SEVNAEQQKLKVLVSIFGRETPVELAFTQVAKI

Sequences:

>Translated_273_residues
MYVTTQEASAPVSTPENDTNDEFPVDDAVAEPARDEVEDTAAVEESVAEESVVEESAPAAPVDAEPADPVAEMKAALRRA
PGDWYVIHSYAGYENKVKANLETRVQNLDLEDYIFQVEVPTEEVTEIKNGQRKNVNRKVLPGYILVRMELNDESWGAVRN
TPGVTGFVGATSRPSPLSIDDVVKFLVPASQQKKAPAAAAAASTETSTDVAPKPAIEVDFEVGESVTVMDGPFATLPASI
SEVNAEQQKLKVLVSIFGRETPVELAFTQVAKI
>Mature_273_residues
MYVTTQEASAPVSTPENDTNDEFPVDDAVAEPARDEVEDTAAVEESVAEESVVEESAPAAPVDAEPADPVAEMKAALRRA
PGDWYVIHSYAGYENKVKANLETRVQNLDLEDYIFQVEVPTEEVTEIKNGQRKNVNRKVLPGYILVRMELNDESWGAVRN
TPGVTGFVGATSRPSPLSIDDVVKFLVPASQQKKAPAAAAAASTETSTDVAPKPAIEVDFEVGESVTVMDGPFATLPASI
SEVNAEQQKLKVLVSIFGRETPVELAFTQVAKI

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusG family [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=190, Percent_Identity=44.7368421052632, Blast_Score=156, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 29389; Mature: 29389

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVTTQEASAPVSTPENDTNDEFPVDDAVAEPARDEVEDTAAVEESVAEESVVEESAPAA
CEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PVDAEPADPVAEMKAALRRAPGDWYVIHSYAGYENKVKANLETRVQNLDLEDYIFQVEVP
CCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHCCCHHHEEEEEECC
TEEVTEIKNGQRKNVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSID
HHHHHHHHCCCCCCCCCEECCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCHH
DVVKFLVPASQQKKAPAAAAAASTETSTDVAPKPAIEVDFEVGESVTVMDGPFATLPASI
HHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHCCCHH
SEVNAEQQKLKVLVSIFGRETPVELAFTQVAKI
HHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MYVTTQEASAPVSTPENDTNDEFPVDDAVAEPARDEVEDTAAVEESVAEESVVEESAPAA
CEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PVDAEPADPVAEMKAALRRAPGDWYVIHSYAGYENKVKANLETRVQNLDLEDYIFQVEVP
CCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHCCCHHHEEEEEECC
TEEVTEIKNGQRKNVNRKVLPGYILVRMELNDESWGAVRNTPGVTGFVGATSRPSPLSID
HHHHHHHHCCCCCCCCCEECCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCHH
DVVKFLVPASQQKKAPAAAAAASTETSTDVAPKPAIEVDFEVGESVTVMDGPFATLPASI
HHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHCCCHH
SEVNAEQQKLKVLVSIFGRETPVELAFTQVAKI
HHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]