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The map label for this gene is mce5D

Identifier: 54027078

GI number: 54027078

Start: 5405800

End: 5407041

Strand: Reverse

Name: mce5D

Synonym: nfa51040

Alternate gene names: NA

Gene position: 5407041-5405800 (Counterclockwise)

Preceding gene: 54027079

Following gene: 54027077

Centisome position: 89.8

GC content: 69.81

Gene sequence:

>1242_bases
GTGGCCGCCGGAGTGCAGGGCAGGCGCGGCGCGCGGGTCGCGATCGCGCTGGTGGTCGCGGTCGCCGTGGTGGCCGCCGG
TGTGCTGTGGTGGGGCCTCGACCGCTGGACCACCACCAGGATCACCGCCTACTTCGACCGTTCGGTCGGCATCTACGAGG
GTTCGGACGTGCGGATCCTCGGTGTGCCGGTGGGCTCGGTGGAATCGGTGGAGCCGCAGGGCGATCAGGTGAAGGTCGTG
CTGGCGGTGGACGGCGACTACGACGTGCCCGCCGACGCGCAGGCCGCGCAGATCACGCCGTCGGTGGTCGCCGACCGCTA
CATCCAGCTCACCCCGGTCTACACCGGCGGGCCGAAGATGGACCGCAACGGCACCATCCCGCGCGAGCGCACCGTCACGC
CGGTCGAGGTGGATCAGCTCTACAACAGCATCACCGAACTGTCCGAGGCGCTCGGCCCCGACGGCGCCAACCGGGAAGGC
GCGGTGAACGAGCTGGTGCGCACCTCGGCGGCCAACCTCGCCGGCAACGGTGCGGCGCTGGCCGAGAGCATCACCCAGCT
CTCCGGCGCGGCCAGGTACCTGTCCGAGGCGCGCGGCGACATCTTCGAGACGGTCAAGCACCTGCAGACCTTCGTGAGCA
TGCTGGCCACCAACGATGCCCAGGTGCGCCAGTTCAACGCGCAACTGGCCGACCTGGCGAGCTTCCTGGCCGACGAACGC
CAGAATCTCGGCGAGGCGCTGCAACTGCTCTCGGTGGCGCTGGGCGATGTGGCCCGCTTCGTCGACGACAATCGCGCGCT
CGTCGAGCAGAACGCCACCGCGCTGACCACCCTCACCCGGACCCTCGCCGAGCAGAGCGACGATCTCGCCGCCGCGCTGC
CGGTGCTGCCGGTCGCGCTGAGCAACCTGATCAACATCCACAACGCCGAATCGGGCACGCTCGACATGCGCCCCAACCTC
ACCGATCTGCAGGACCCCTTCGGCATCGTGTGCAAGATGCTCGACCTCGGCAAACTCATGCCGGGCGATCCGCGCTTCGA
GGCGCTGGGCAGGCAGATGCGGCCGGTGCTCGACCACTGCAAGGAGATCACCGACCAGATCACCGCCGGTGTGCAGACGC
CCACGCTGATCCTGCCGTTCGGCATCCTCAGCGGTGAGAACCAGCAGCGGGCGCCGGTGCCCGGCACCGTGCCCGGCACA
CCCTCGGATCAGCTGCCGCCCTCCGAGCAGGGAGACCGGTGA

Upstream 100 bases:

>100_bases
GGGCGCTGGTTCGACGCGGTGATCGTCAACCTGGTACCGCCCGGTCTGCCGGACATCCCGGGCTACCGCGATCCGGTCCG
TGAACTGGGAGGTAACTGAC

Downstream 100 bases:

>100_bases
TGCGTATGCGCTTGCCCGCCACGAGGATGCTCGCCGCCGTCGCGATCGCCGCGACCGCCGCGCTGGTCGGTTCGTGCTCG
GCCGACGGCATCTACAGCGT

Product: putative Mce family protein

Products: NA

Alternate protein names: Mce Family Protein; MCE-Family D; Secreted Protein; MCE Family Protein; Mce Family D; MCE-Family Protein; Mammalian Cell Entry Related Domain Protein; Mammalian Cell Entry Related Domain-Containing Protein; Mammalian Cell Entry-Like Domain-Containing Protein; Virulence Factor MCE-Like Protein; Mce-Related Protein; MCE-Family

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MAAGVQGRRGARVAIALVVAVAVVAAGVLWWGLDRWTTTRITAYFDRSVGIYEGSDVRILGVPVGSVESVEPQGDQVKVV
LAVDGDYDVPADAQAAQITPSVVADRYIQLTPVYTGGPKMDRNGTIPRERTVTPVEVDQLYNSITELSEALGPDGANREG
AVNELVRTSAANLAGNGAALAESITQLSGAARYLSEARGDIFETVKHLQTFVSMLATNDAQVRQFNAQLADLASFLADER
QNLGEALQLLSVALGDVARFVDDNRALVEQNATALTTLTRTLAEQSDDLAAALPVLPVALSNLINIHNAESGTLDMRPNL
TDLQDPFGIVCKMLDLGKLMPGDPRFEALGRQMRPVLDHCKEITDQITAGVQTPTLILPFGILSGENQQRAPVPGTVPGT
PSDQLPPSEQGDR

Sequences:

>Translated_413_residues
MAAGVQGRRGARVAIALVVAVAVVAAGVLWWGLDRWTTTRITAYFDRSVGIYEGSDVRILGVPVGSVESVEPQGDQVKVV
LAVDGDYDVPADAQAAQITPSVVADRYIQLTPVYTGGPKMDRNGTIPRERTVTPVEVDQLYNSITELSEALGPDGANREG
AVNELVRTSAANLAGNGAALAESITQLSGAARYLSEARGDIFETVKHLQTFVSMLATNDAQVRQFNAQLADLASFLADER
QNLGEALQLLSVALGDVARFVDDNRALVEQNATALTTLTRTLAEQSDDLAAALPVLPVALSNLINIHNAESGTLDMRPNL
TDLQDPFGIVCKMLDLGKLMPGDPRFEALGRQMRPVLDHCKEITDQITAGVQTPTLILPFGILSGENQQRAPVPGTVPGT
PSDQLPPSEQGDR
>Mature_412_residues
AAGVQGRRGARVAIALVVAVAVVAAGVLWWGLDRWTTTRITAYFDRSVGIYEGSDVRILGVPVGSVESVEPQGDQVKVVL
AVDGDYDVPADAQAAQITPSVVADRYIQLTPVYTGGPKMDRNGTIPRERTVTPVEVDQLYNSITELSEALGPDGANREGA
VNELVRTSAANLAGNGAALAESITQLSGAARYLSEARGDIFETVKHLQTFVSMLATNDAQVRQFNAQLADLASFLADERQ
NLGEALQLLSVALGDVARFVDDNRALVEQNATALTTLTRTLAEQSDDLAAALPVLPVALSNLINIHNAESGTLDMRPNLT
DLQDPFGIVCKMLDLGKLMPGDPRFEALGRQMRPVLDHCKEITDQITAGVQTPTLILPFGILSGENQQRAPVPGTVPGTP
SDQLPPSEQGDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43982; Mature: 43851

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGVQGRRGARVAIALVVAVAVVAAGVLWWGLDRWTTTRITAYFDRSVGIYEGSDVRIL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCEECCCCEEEE
GVPVGSVESVEPQGDQVKVVLAVDGDYDVPADAQAAQITPSVVADRYIQLTPVYTGGPKM
EECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHCCHHHHHCCEEEEEEEECCCCCC
DRNGTIPRERTVTPVEVDQLYNSITELSEALGPDGANREGAVNELVRTSAANLAGNGAAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
AESITQLSGAARYLSEARGDIFETVKHLQTFVSMLATNDAQVRQFNAQLADLASFLADER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QNLGEALQLLSVALGDVARFVDDNRALVEQNATALTTLTRTLAEQSDDLAAALPVLPVAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SNLINIHNAESGTLDMRPNLTDLQDPFGIVCKMLDLGKLMPGDPRFEALGRQMRPVLDHC
HHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KEITDQITAGVQTPTLILPFGILSGENQQRAPVPGTVPGTPSDQLPPSEQGDR
HHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAGVQGRRGARVAIALVVAVAVVAAGVLWWGLDRWTTTRITAYFDRSVGIYEGSDVRIL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCEECCCCEEEE
GVPVGSVESVEPQGDQVKVVLAVDGDYDVPADAQAAQITPSVVADRYIQLTPVYTGGPKM
EECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHCCHHHHHCCEEEEEEEECCCCCC
DRNGTIPRERTVTPVEVDQLYNSITELSEALGPDGANREGAVNELVRTSAANLAGNGAAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
AESITQLSGAARYLSEARGDIFETVKHLQTFVSMLATNDAQVRQFNAQLADLASFLADER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QNLGEALQLLSVALGDVARFVDDNRALVEQNATALTTLTRTLAEQSDDLAAALPVLPVAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SNLINIHNAESGTLDMRPNLTDLQDPFGIVCKMLDLGKLMPGDPRFEALGRQMRPVLDHC
HHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KEITDQITAGVQTPTLILPFGILSGENQQRAPVPGTVPGTPSDQLPPSEQGDR
HHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA