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The map label for this gene is 54027034

Identifier: 54027034

GI number: 54027034

Start: 5316864

End: 5317997

Strand: Reverse

Name: 54027034

Synonym: nfa50600

Alternate gene names: NA

Gene position: 5317997-5316864 (Counterclockwise)

Preceding gene: 54027035

Following gene: 54027030

Centisome position: 88.32

GC content: 74.78

Gene sequence:

>1134_bases
ATGGCGGGCTCCACCGCGCAGGGTGCGCAGGCGCCCGCCGAACCGGTGGAGCCGCCCGCCGAGTTCGTGCCCGCCGCCGA
CCGCACCGTCGGCCTGTTGACCGTCGCGTCGGACACGCCGCGCGCGCTGCGCAGCACCACCCCACCCGCCGACGCCGCGG
TCGCGGACACGGTGCCGCTGCGCGAGATCGCGCTACCCAGAAGCGGTGCGGTCCTGGGCATTCCGGAGATCGTGCTGGCC
GCCTACCGCAATGCCGAACTGGCCCTGGCCTCCTCGATGCCCGGCTGCGGACTGAGCTGGCACCTGCTCGCCGGCATCGG
CCGCATCGAATCCGCGCACGCGAGCGGTGGCCGCACCGACGCCGCGGGCACCACCGTCTCGCCGATCTTCGGTCCCGCGC
TGGACGGCACCCTGCCCGGCAACGAGATCATCGAGGCCGCCGACGGCGGCTACGTCCGGGCCGTCGGCCCGATGCAGTTC
CTGCCCAGCACCTGGTCGCTGTACTCCGCCGACGGCAACGGCGACGGCGTCGCCGACCCGCACAACGTGTTCGACGCTTC
GCTGGCCGCGGGCAAATACCTGTGTTCGGGCGGAACGGATCTGCGCGATCGCTCCCAGGAACTGCGAGCGGTGCTGCGCT
ACAACAATTCCGCCTCCTATGCCGCCGACGTGTTGAGCTGGTCGGCGGCCTACCGCACCGGCGGCGCCCCCGCCCCGGTC
ACCGTCGCTCCCGATCGCGTTCCGCCGGGGAGCGCCCCCGGCGCGCCCCGCGCGGTCGACGGCCCCGCCATCCTCGCCCA
GTCCCCGACCGGCGACCGCCCGCTCACCTTGGAACCGATGGCGCCCACCGAAGTCCCGCGCCGCGAGCAACCCACGCTGA
TCACCCTCCCCGGTATCGGCGCCGTCTCCTGCGGTCTGCTCTGCGCGGGGCCGGGCGAACCCCTCGTCCCGGACCCCGAG
CCCGAACCGTCCGTCCCCGCCGACCTCCCCGAGCAGACCTACGGCCCCGCCGCGCCCCTGGAGCTCACCACGCCCGAGGC
CGAAGCCCCCGCCCCGCCCTCCGCGGCCCCGCACACCCCTCGCATCGAACTGCCCTTCGGCGTCACCATCCCGCTCCCCA
TGCCCCCGACCTGA

Upstream 100 bases:

>100_bases
CTCGAATCGGGCCCGGTTCCGTGCGGGACGGGATTGGTCGGGGGTCATGCGTACATCTGCTCCACTCACTGCCTCGGCAC
TGCTCACCGCCGGACTCCTC

Downstream 100 bases:

>100_bases
GCGGATGCCGGCGGGCGCGCCCGCCTACGGGGCGTAGCTGCCCGGCGGCAGATCGGGCATGAGATAGCGCCAGGGCGCCA
CACCGGGTTCCAGCGGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Membrane-Bound Lytic Murein Transglycosylase B; Lytic Transglycosylase Catalytic; Lipoprotein LpqU; NLP/P60-Family Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B-Like; Transglycosylase; LOW QUALITY PROTEIN Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase; Cell Wall-Associated Hydrolase Invasion-Associated Protein; LpqU Protein; Peptidase; Membrane-Bound Lytic Murein Transglycosylase B Protein; NLP/P60 Protein

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MAGSTAQGAQAPAEPVEPPAEFVPAADRTVGLLTVASDTPRALRSTTPPADAAVADTVPLREIALPRSGAVLGIPEIVLA
AYRNAELALASSMPGCGLSWHLLAGIGRIESAHASGGRTDAAGTTVSPIFGPALDGTLPGNEIIEAADGGYVRAVGPMQF
LPSTWSLYSADGNGDGVADPHNVFDASLAAGKYLCSGGTDLRDRSQELRAVLRYNNSASYAADVLSWSAAYRTGGAPAPV
TVAPDRVPPGSAPGAPRAVDGPAILAQSPTGDRPLTLEPMAPTEVPRREQPTLITLPGIGAVSCGLLCAGPGEPLVPDPE
PEPSVPADLPEQTYGPAAPLELTTPEAEAPAPPSAAPHTPRIELPFGVTIPLPMPPT

Sequences:

>Translated_377_residues
MAGSTAQGAQAPAEPVEPPAEFVPAADRTVGLLTVASDTPRALRSTTPPADAAVADTVPLREIALPRSGAVLGIPEIVLA
AYRNAELALASSMPGCGLSWHLLAGIGRIESAHASGGRTDAAGTTVSPIFGPALDGTLPGNEIIEAADGGYVRAVGPMQF
LPSTWSLYSADGNGDGVADPHNVFDASLAAGKYLCSGGTDLRDRSQELRAVLRYNNSASYAADVLSWSAAYRTGGAPAPV
TVAPDRVPPGSAPGAPRAVDGPAILAQSPTGDRPLTLEPMAPTEVPRREQPTLITLPGIGAVSCGLLCAGPGEPLVPDPE
PEPSVPADLPEQTYGPAAPLELTTPEAEAPAPPSAAPHTPRIELPFGVTIPLPMPPT
>Mature_376_residues
AGSTAQGAQAPAEPVEPPAEFVPAADRTVGLLTVASDTPRALRSTTPPADAAVADTVPLREIALPRSGAVLGIPEIVLAA
YRNAELALASSMPGCGLSWHLLAGIGRIESAHASGGRTDAAGTTVSPIFGPALDGTLPGNEIIEAADGGYVRAVGPMQFL
PSTWSLYSADGNGDGVADPHNVFDASLAAGKYLCSGGTDLRDRSQELRAVLRYNNSASYAADVLSWSAAYRTGGAPAPVT
VAPDRVPPGSAPGAPRAVDGPAILAQSPTGDRPLTLEPMAPTEVPRREQPTLITLPGIGAVSCGLLCAGPGEPLVPDPEP
EPSVPADLPEQTYGPAAPLELTTPEAEAPAPPSAAPHTPRIELPFGVTIPLPMPPT

Specific function: Unknown

COG id: COG2951

COG function: function code M; Membrane-bound lytic murein transglycosylase B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38203; Mature: 38072

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSTAQGAQAPAEPVEPPAEFVPAADRTVGLLTVASDTPRALRSTTPPADAAVADTVPL
CCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCHHHHCCCCCCCCHHHCCCCH
REIALPRSGAVLGIPEIVLAAYRNAELALASSMPGCGLSWHLLAGIGRIESAHASGGRTD
HHHCCCCCCCEECHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
AAGTTVSPIFGPALDGTLPGNEIIEAADGGYVRAVGPMQFLPSTWSLYSADGNGDGVADP
CCCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEECCHHHCCCCCEEEECCCCCCCCCCC
HNVFDASLAAGKYLCSGGTDLRDRSQELRAVLRYNNSASYAADVLSWSAAYRTGGAPAPV
HHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCE
TVAPDRVPPGSAPGAPRAVDGPAILAQSPTGDRPLTLEPMAPTEVPRREQPTLITLPGIG
EECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEECCCC
AVSCGLLCAGPGEPLVPDPEPEPSVPADLPEQTYGPAAPLELTTPEAEAPAPPSAAPHTP
HHHCCEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCCCCCCCC
RIELPFGVTIPLPMPPT
EEECCCCCEECCCCCCC
>Mature Secondary Structure 
AGSTAQGAQAPAEPVEPPAEFVPAADRTVGLLTVASDTPRALRSTTPPADAAVADTVPL
CCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCHHHHCCCCCCCCHHHCCCCH
REIALPRSGAVLGIPEIVLAAYRNAELALASSMPGCGLSWHLLAGIGRIESAHASGGRTD
HHHCCCCCCCEECHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
AAGTTVSPIFGPALDGTLPGNEIIEAADGGYVRAVGPMQFLPSTWSLYSADGNGDGVADP
CCCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEECCHHHCCCCCEEEECCCCCCCCCCC
HNVFDASLAAGKYLCSGGTDLRDRSQELRAVLRYNNSASYAADVLSWSAAYRTGGAPAPV
HHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCE
TVAPDRVPPGSAPGAPRAVDGPAILAQSPTGDRPLTLEPMAPTEVPRREQPTLITLPGIG
EECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEECCCC
AVSCGLLCAGPGEPLVPDPEPEPSVPADLPEQTYGPAAPLELTTPEAEAPAPPSAAPHTP
HHHCCEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCCCCCCCC
RIELPFGVTIPLPMPPT
EEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA