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The map label for this gene is yrbE4A [C]

Identifier: 54027028

GI number: 54027028

Start: 5311522

End: 5312376

Strand: Reverse

Name: yrbE4A [C]

Synonym: nfa50540

Alternate gene names: 54027028

Gene position: 5312376-5311522 (Counterclockwise)

Preceding gene: 54027029

Following gene: 54027027

Centisome position: 88.23

GC content: 68.19

Gene sequence:

>855_bases
GTGACAACCACGGAAAGCCCCACGGCGCGAACCGATCTCGAACGCGCCGTCGACGATCTGAAGGGTCTGTGGCGACGCCA
CCCCCAGCAGTCGCTGGAGACCCTCGGTCGCCAGGTCACGCTCGGCCGGGACGCGGTGATCGAACTGTTCCGCGCGCTGG
CCGCGCGGCGGTTCCCTTACCACGAGTTCATCCGGCAGTGCGCGTTCATGTCGAACGTCTCGGCGGCGCCGACGGTGTTC
GTCGCCATCCCGATCGCGGTGGTCGTGTCCATCCAGGTCGGCGCGCTGGTCAACCAGGTCGGCGCGACGACGTTCATCGG
CGCGGTCGCCGGCCTCGGCATCATCCGGCAGGGCGCGCCCCTGGTCACCTCGCTGATGATCGCCGGCGCGGTCGGTTCGG
CCATCTGCGCCGATCTCGGCTCGCGCACCATCCGCGAGGAGATCGACGCCATGATGGTGATGGGGGTGAACCCGGTGCGC
AGGCTGGTCGCGCCGCGCCTGGTGGCGGCGGTGCTGGTGAGCATGCTGCTGTGCGGGTTCATCGTCTTCGTCGGCTTCGC
GACGGCCTACATGTTCAACGTCTACGCCCAGTCCGGCACGCCCGGGTCGTTCATCGGCTCCTTCGCGTCCTTCGCGGTGG
CGAGCGACCTGATCGTGGCGCTGGTCAAGGCGGCGATCTTCGGTGCGCTCACCGCGATCATCGCCTGCGACATCGGCCTG
CACGCCAAGGGCGGCCCGGGCGGGGTGGCCAACGCGGTGAACTCCGCGGTGGTCACCTCGGCGCTGATGTTGTTCGCCAC
CAACATCATTCTCACCCAGCTGTACAACACGCTGTTCCCCACGAAGGTGATCTGA

Upstream 100 bases:

>100_bases
CAGGCTGTGTAACACTTCACACGCTCCGCGCCCTCGCCGGGGAGAGCCGCTATCGGCAGGCGAGCGAGCGAAGAGAACGC
CCAGAAAGGACTCGGGCAGC

Downstream 100 bases:

>100_bases
GGTGGGATCGAAATACACGCCGCCCGCCCTGCGGCCCGTGCGGGTCGTCGGCGCCGCGGTCGCCGTGCCCTACCAGGCCA
ACCAGCGGCTCGGGCACCAG

Product: putative YrbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTTTESPTARTDLERAVDDLKGLWRRHPQQSLETLGRQVTLGRDAVIELFRALAARRFPYHEFIRQCAFMSNVSAAPTVF
VAIPIAVVVSIQVGALVNQVGATTFIGAVAGLGIIRQGAPLVTSLMIAGAVGSAICADLGSRTIREEIDAMMVMGVNPVR
RLVAPRLVAAVLVSMLLCGFIVFVGFATAYMFNVYAQSGTPGSFIGSFASFAVASDLIVALVKAAIFGALTAIIACDIGL
HAKGGPGGVANAVNSAVVTSALMLFATNIILTQLYNTLFPTKVI

Sequences:

>Translated_284_residues
MTTTESPTARTDLERAVDDLKGLWRRHPQQSLETLGRQVTLGRDAVIELFRALAARRFPYHEFIRQCAFMSNVSAAPTVF
VAIPIAVVVSIQVGALVNQVGATTFIGAVAGLGIIRQGAPLVTSLMIAGAVGSAICADLGSRTIREEIDAMMVMGVNPVR
RLVAPRLVAAVLVSMLLCGFIVFVGFATAYMFNVYAQSGTPGSFIGSFASFAVASDLIVALVKAAIFGALTAIIACDIGL
HAKGGPGGVANAVNSAVVTSALMLFATNIILTQLYNTLFPTKVI
>Mature_283_residues
TTTESPTARTDLERAVDDLKGLWRRHPQQSLETLGRQVTLGRDAVIELFRALAARRFPYHEFIRQCAFMSNVSAAPTVFV
AIPIAVVVSIQVGALVNQVGATTFIGAVAGLGIIRQGAPLVTSLMIAGAVGSAICADLGSRTIREEIDAMMVMGVNPVRR
LVAPRLVAAVLVSMLLCGFIVFVGFATAYMFNVYAQSGTPGSFIGSFASFAVASDLIVALVKAAIFGALTAIIACDIGLH
AKGGPGGVANAVNSAVVTSALMLFATNIILTQLYNTLFPTKVI

Specific function: Could be part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=250, Percent_Identity=28.8, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 29773; Mature: 29642

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTTESPTARTDLERAVDDLKGLWRRHPQQSLETLGRQVTLGRDAVIELFRALAARRFPY
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCH
HEFIRQCAFMSNVSAAPTVFVAIPIAVVVSIQVGALVNQVGATTFIGAVAGLGIIRQGAP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LVTSLMIAGAVGSAICADLGSRTIREEIDAMMVMGVNPVRRLVAPRLVAAVLVSMLLCGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IVFVGFATAYMFNVYAQSGTPGSFIGSFASFAVASDLIVALVKAAIFGALTAIIACDIGL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HAKGGPGGVANAVNSAVVTSALMLFATNIILTQLYNTLFPTKVI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]