Click here to switch to the map view.

The map label for this gene is mce4D

Identifier: 54027023

GI number: 54027023

Start: 5306049

End: 5307164

Strand: Reverse

Name: mce4D

Synonym: nfa50490

Alternate gene names: NA

Gene position: 5307164-5306049 (Counterclockwise)

Preceding gene: 54027024

Following gene: 54027022

Centisome position: 88.14

GC content: 68.1

Gene sequence:

>1116_bases
ATGAAGAGACTGATCCACCGACTCGGGCTCGGGGCGAAACTCGCGACCCTGTGCCTGACCGCCGCCGTCGCCTCGGGATG
TTCTCTGCTGCCCGACAGCATCGCCGGGCTGCCGGAGGAATACCTCGGCGAAAAGCTGCGCATCAGCGCGGATTTCGAGA
ACGTGGCCGGGCTGTACGCGGGCAACGAGGTCGCGGTGCTCGGCGTGCCCGTCGGGCGCGTGGACACCGTCACCCCCAAG
GGCAGCTACGTCCAGGTGACGATGTCGCTGGACAAGGACGTGCGGGTCCCCGCCGACGCGATGGCGGCGCTGGTGTCGCC
GCAGCTGATCACCAACCGGCACGTCGAACTGGCCCCCGCCTACACCGGCGACGGCCCGACGCTGGCCGACGGCGACCACA
TCCCGCTGGCCCGTACCCGCGTGCCGGTGGAACTGGACCGCATCCTGGAGAACTTCGACCAGCTCGGCGCCGCGTTGAAG
GGGGACAACCAGGAGGGCCCGATGGCCAGCCGGGTGCTGTTCCCGCTGCTCGACGGCAACGGCGACCGGCTGCGCGAGAC
GCTCGACGAACTGGCCGGCGCGTTCGAGGTGACCTTCGCCAACAAGGACCAGATCTCCAACACCATCATCAAGCTCAACG
AGATCACCCAGGTCATCGCCGCCAACGATCAGACCGTGCGCGATTTCAGCGGCAGGCTCACCGAACTGGTGCAGCTGATG
GGGGAGCAGGCCCCCGGTCTGCACGCGGTGCTGACCCAGCTCAACGACTTCGTCGCCAACACCTCCGCCGTGGTCGGCCA
GAACCAGGACCAGCTGGCCGGCGCGCTGACCCGCTTCGTCGCCATCACCGAGCAGATGCGCGCCAATGCCCGCCAGCTCA
CCGAGATCGTGGACGTGACCCCGCTGTTCTTCGAAAACCTGGCCAACGCCACCAGTTTCGAGCACCGGGCGATCCGGTTG
CACGGCCTGCTGGACAAGGCGGTGCTCGACGGCGAGGCGCTGTCGCTGTTCTGCGAGCGCGTGCAGATGCGCCTGGACGG
CTGCCGCACCGGCAGGATCATGGACATGGGGCCGGACTTCGGCCTCACCGCCGCACTGCTGGGGCTGACGAAATGA

Upstream 100 bases:

>100_bases
ACAACGCGCTCGGCAACGGCCCCTACGGCGAGGTGTGGGCGCCGTGGGTCCTACCCGACAACTGGCTGTGCTTCGCGCAA
GCGATTCCGGGGTGCAACTG

Downstream 100 bases:

>100_bases
GGGCCGCGCGCATCGCCGTCGCGGCGCTGAGCCTGGCCGTGCTGACCGGCACCACCGGGTGCGCGGTGACCGTGGACAAC
GTGCCGCTGCCGAAACCGGG

Product: putative Mce family protein

Products: NA

Alternate protein names: Mce Family Protein; MCE Family Protein; MCE-Family D; Secreted Protein; Mce Family D; MCE-Family Protein; Mce-Related Protein; MCE-Family; Mce Family C; MCE-Family C; Virulence Factor MCE-Like Protein; MCE-Family B; Mammalian Cell Entry Related Domain Protein

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKRLIHRLGLGAKLATLCLTAAVASGCSLLPDSIAGLPEEYLGEKLRISADFENVAGLYAGNEVAVLGVPVGRVDTVTPK
GSYVQVTMSLDKDVRVPADAMAALVSPQLITNRHVELAPAYTGDGPTLADGDHIPLARTRVPVELDRILENFDQLGAALK
GDNQEGPMASRVLFPLLDGNGDRLRETLDELAGAFEVTFANKDQISNTIIKLNEITQVIAANDQTVRDFSGRLTELVQLM
GEQAPGLHAVLTQLNDFVANTSAVVGQNQDQLAGALTRFVAITEQMRANARQLTEIVDVTPLFFENLANATSFEHRAIRL
HGLLDKAVLDGEALSLFCERVQMRLDGCRTGRIMDMGPDFGLTAALLGLTK

Sequences:

>Translated_371_residues
MKRLIHRLGLGAKLATLCLTAAVASGCSLLPDSIAGLPEEYLGEKLRISADFENVAGLYAGNEVAVLGVPVGRVDTVTPK
GSYVQVTMSLDKDVRVPADAMAALVSPQLITNRHVELAPAYTGDGPTLADGDHIPLARTRVPVELDRILENFDQLGAALK
GDNQEGPMASRVLFPLLDGNGDRLRETLDELAGAFEVTFANKDQISNTIIKLNEITQVIAANDQTVRDFSGRLTELVQLM
GEQAPGLHAVLTQLNDFVANTSAVVGQNQDQLAGALTRFVAITEQMRANARQLTEIVDVTPLFFENLANATSFEHRAIRL
HGLLDKAVLDGEALSLFCERVQMRLDGCRTGRIMDMGPDFGLTAALLGLTK
>Mature_371_residues
MKRLIHRLGLGAKLATLCLTAAVASGCSLLPDSIAGLPEEYLGEKLRISADFENVAGLYAGNEVAVLGVPVGRVDTVTPK
GSYVQVTMSLDKDVRVPADAMAALVSPQLITNRHVELAPAYTGDGPTLADGDHIPLARTRVPVELDRILENFDQLGAALK
GDNQEGPMASRVLFPLLDGNGDRLRETLDELAGAFEVTFANKDQISNTIIKLNEITQVIAANDQTVRDFSGRLTELVQLM
GEQAPGLHAVLTQLNDFVANTSAVVGQNQDQLAGALTRFVAITEQMRANARQLTEIVDVTPLFFENLANATSFEHRAIRL
HGLLDKAVLDGEALSLFCERVQMRLDGCRTGRIMDMGPDFGLTAALLGLTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39880; Mature: 39880

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIHRLGLGAKLATLCLTAAVASGCSLLPDSIAGLPEEYLGEKLRISADFENVAGLYA
CHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHCCCEEEEEECHHHHHHEEC
GNEVAVLGVPVGRVDTVTPKGSYVQVTMSLDKDVRVPADAMAALVSPQLITNRHVELAPA
CCEEEEEEECCCCCEECCCCCCEEEEEEECCCCCCCCHHHHHHHHCCHHHHCCCEEEECC
YTGDGPTLADGDHIPLARTRVPVELDRILENFDQLGAALKGDNQEGPMASRVLFPLLDGN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEECCC
GDRLRETLDELAGAFEVTFANKDQISNTIIKLNEITQVIAANDQTVRDFSGRLTELVQLM
HHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GEQAPGLHAVLTQLNDFVANTSAVVGQNQDQLAGALTRFVAITEQMRANARQLTEIVDVT
CCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLFFENLANATSFEHRAIRLHGLLDKAVLDGEALSLFCERVQMRLDGCRTGRIMDMGPDF
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
GLTAALLGLTK
CHHHHHHHCCC
>Mature Secondary Structure
MKRLIHRLGLGAKLATLCLTAAVASGCSLLPDSIAGLPEEYLGEKLRISADFENVAGLYA
CHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHCCCEEEEEECHHHHHHEEC
GNEVAVLGVPVGRVDTVTPKGSYVQVTMSLDKDVRVPADAMAALVSPQLITNRHVELAPA
CCEEEEEEECCCCCEECCCCCCEEEEEEECCCCCCCCHHHHHHHHCCHHHHCCCEEEECC
YTGDGPTLADGDHIPLARTRVPVELDRILENFDQLGAALKGDNQEGPMASRVLFPLLDGN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEECCC
GDRLRETLDELAGAFEVTFANKDQISNTIIKLNEITQVIAANDQTVRDFSGRLTELVQLM
HHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GEQAPGLHAVLTQLNDFVANTSAVVGQNQDQLAGALTRFVAITEQMRANARQLTEIVDVT
CCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLFFENLANATSFEHRAIRLHGLLDKAVLDGEALSLFCERVQMRLDGCRTGRIMDMGPDF
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
GLTAALLGLTK
CHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA