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The map label for this gene is 54027020

Identifier: 54027020

GI number: 54027020

Start: 5302997

End: 5303737

Strand: Reverse

Name: 54027020

Synonym: nfa50460

Alternate gene names: NA

Gene position: 5303737-5302997 (Counterclockwise)

Preceding gene: 54027021

Following gene: 54027017

Centisome position: 88.08

GC content: 70.99

Gene sequence:

>741_bases
ATGAGTGACAACGACGTCGACAAGGCCGCCCCTCCCGAGCCGGACCGCGACGCCGCGGAACCGGCCGAGGGGGCGGGCGC
GACGACCGGCTCGGCCGCGACCTCGGCGGGGAAGGACGCGTCCGTGGACCAGACGGTCACGCTCGACAAGGCGGAACCGG
CGGGGGATTCCGCCGACGAGACCGAAAAGGCGTTCACCGCACCGGGATTCGCGGCGAAGCTGCGACTGCCCGCGGGCCGT
GCCCGCACCGTGACCGCCGGTGCGGCCGTCGCGGTGCTGGTCGGCGCGTCGGTCGGCGCGGCGGGCTGGTTCTACAGCCA
GAACAGCGAACACGAGGGCCTGCTGGCCGCGCACGAGGAGGCCAGGCAGGCCGCCTGCGCCTACGCCCCGGTGCTGGCCG
ACTACGACGCGAAGAACCTCGACGCCTATTTCGCCAAGGTGCTCGACGGCGCGACCGGCGACTGGCGCAAGCAGTTCGAC
GACACCAGCAGGGAACTGCGCGAGGTGCTCACCCAGGGCGAGGTGGTGTCCAAGGCCGACGACGTGCAGTGCGCGATCAA
GACCGGCGACGAGACCTCCGCCGAAGCGATCGTCGTCATCGGCCAGACCATCACCAGCGTCGGCACCCAGGGCAAACCTT
CGCCGGGGCAGCTGTCGATGATCATGCGGATGGAGAAGACCGACGGCCGCTGGCTGGTCAACCACGTCAACTCGCCGCTG
GCCTCGGTCCCCCAGCAGTGA

Upstream 100 bases:

>100_bases
CTCCGGCCCGCCCCCCGGCGTGACCGGCGACGAGATGTCCCAGCCCGCACCCACACCCCGGTAGGCCCGCGCCACGCCGG
AGACAAGGAACCGAACTGCC

Downstream 100 bases:

>100_bases
CCCCGCGCGGCCGCCGCCCTGCCGACCGCGCTCAGGCGGTGGCCGGGCGGCCGAACAGGATGACCTGCATCAGGTGGATC
ACCCGGGCCTGCGAGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSDNDVDKAAPPEPDRDAAEPAEGAGATTGSAATSAGKDASVDQTVTLDKAEPAGDSADETEKAFTAPGFAAKLRLPAGR
ARTVTAGAAVAVLVGASVGAAGWFYSQNSEHEGLLAAHEEARQAACAYAPVLADYDAKNLDAYFAKVLDGATGDWRKQFD
DTSRELREVLTQGEVVSKADDVQCAIKTGDETSAEAIVVIGQTITSVGTQGKPSPGQLSMIMRMEKTDGRWLVNHVNSPL
ASVPQQ

Sequences:

>Translated_246_residues
MSDNDVDKAAPPEPDRDAAEPAEGAGATTGSAATSAGKDASVDQTVTLDKAEPAGDSADETEKAFTAPGFAAKLRLPAGR
ARTVTAGAAVAVLVGASVGAAGWFYSQNSEHEGLLAAHEEARQAACAYAPVLADYDAKNLDAYFAKVLDGATGDWRKQFD
DTSRELREVLTQGEVVSKADDVQCAIKTGDETSAEAIVVIGQTITSVGTQGKPSPGQLSMIMRMEKTDGRWLVNHVNSPL
ASVPQQ
>Mature_245_residues
SDNDVDKAAPPEPDRDAAEPAEGAGATTGSAATSAGKDASVDQTVTLDKAEPAGDSADETEKAFTAPGFAAKLRLPAGRA
RTVTAGAAVAVLVGASVGAAGWFYSQNSEHEGLLAAHEEARQAACAYAPVLADYDAKNLDAYFAKVLDGATGDWRKQFDD
TSRELREVLTQGEVVSKADDVQCAIKTGDETSAEAIVVIGQTITSVGTQGKPSPGQLSMIMRMEKTDGRWLVNHVNSPLA
SVPQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25507; Mature: 25376

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNDVDKAAPPEPDRDAAEPAEGAGATTGSAATSAGKDASVDQTVTLDKAEPAGDSADE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEECCCCCCCCCCCH
TEKAFTAPGFAAKLRLPAGRARTVTAGAAVAVLVGASVGAAGWFYSQNSEHEGLLAAHEE
HHHHHCCCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHH
ARQAACAYAPVLADYDAKNLDAYFAKVLDGATGDWRKQFDDTSRELREVLTQGEVVSKAD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCC
DVQCAIKTGDETSAEAIVVIGQTITSVGTQGKPSPGQLSMIMRMEKTDGRWLVNHVNSPL
CCEEEEECCCCCCCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEHHHCCCH
ASVPQQ
HHCCCC
>Mature Secondary Structure 
SDNDVDKAAPPEPDRDAAEPAEGAGATTGSAATSAGKDASVDQTVTLDKAEPAGDSADE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEECCCCCCCCCCCH
TEKAFTAPGFAAKLRLPAGRARTVTAGAAVAVLVGASVGAAGWFYSQNSEHEGLLAAHEE
HHHHHCCCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHH
ARQAACAYAPVLADYDAKNLDAYFAKVLDGATGDWRKQFDDTSRELREVLTQGEVVSKAD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCC
DVQCAIKTGDETSAEAIVVIGQTITSVGTQGKPSPGQLSMIMRMEKTDGRWLVNHVNSPL
CCEEEEECCCCCCCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEHHHCCCH
ASVPQQ
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA