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The map label for this gene is 54026989

Identifier: 54026989

GI number: 54026989

Start: 5229431

End: 5230108

Strand: Reverse

Name: 54026989

Synonym: nfa50150

Alternate gene names: NA

Gene position: 5230108-5229431 (Counterclockwise)

Preceding gene: 54026994

Following gene: 54026986

Centisome position: 86.86

GC content: 74.48

Gene sequence:

>678_bases
ATGGACGCCACCGCCCGCCCGCCGCTCTCACCCACCCCGCGCAGCACACCCACCCGGCTGAAGGAGCGCGCCCGTGCCGA
CCGCGCCGCTCTCGACGCGGTGCTCGACGCCGGGTTCGTCTGCCACCTCGGTGTCGTGCTCGACGGCAGTCCGCTGGTGC
TACCGACCGTCTACGGCCACGACGGCGCCTTCCTCTACCTGCACGGCTCGACCGGCGCGGGCAACCTGCGCGCCGCCCGC
GACGCCGAGGTGTCGGTCGCCGTCACCCACGTCGACGGTGTCGTCTACGCCCGTTCGGCCATGCACTTCTCGGCCAACTA
CCGCTCGGCGGTGATCCGTGGCCGCGCCGTCGAGGTGACCGACCACGCGGCGCGCCTGGACGCGTTGCGCCGCATCGTCG
AGCACACCGCGCCCGGCTCCTGGGACCGGGTGCGTCCGCCGAGCCGCAAGGAGATGGCCGCCACCCTCGTCCTGGCCGTG
GATCTCACCGAGGCGTCGGTGAAGGTGCGCACCGGCGATCCACGCGACGACGCGGACGACATCGCCGCGGGTGGCGTGTG
GGCCGGGGTGCTGCCGATGCGGCAGGTGTTCGACACACCGGTACCGAGCGCGGATCTGGCGGCGGGGGTGCCGGTGCCAC
CGTCCGTGCTCGGGCGCGGGGCGGTGGCGGTGGGGTGA

Upstream 100 bases:

>100_bases
GACGATCGGCAACTCGTCGAGCACGTTCCCTCGATTGGCCTGTCGAAGTAATGCGGAATTGGCCCTTCGATCATGCCACT
CGCTCGCCCATGCTGGGTCC

Downstream 100 bases:

>100_bases
GCGGGCCGGCCCGGTGGCTCACCAGAAGCGCAGCGGTAGGCGGAGTTCCGCGCCGGCCCGCAGCGCCGCGTCGCGCAGGG
CCGCCGGGGAATCGATCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MDATARPPLSPTPRSTPTRLKERARADRAALDAVLDAGFVCHLGVVLDGSPLVLPTVYGHDGAFLYLHGSTGAGNLRAAR
DAEVSVAVTHVDGVVYARSAMHFSANYRSAVIRGRAVEVTDHAARLDALRRIVEHTAPGSWDRVRPPSRKEMAATLVLAV
DLTEASVKVRTGDPRDDADDIAAGGVWAGVLPMRQVFDTPVPSADLAAGVPVPPSVLGRGAVAVG

Sequences:

>Translated_225_residues
MDATARPPLSPTPRSTPTRLKERARADRAALDAVLDAGFVCHLGVVLDGSPLVLPTVYGHDGAFLYLHGSTGAGNLRAAR
DAEVSVAVTHVDGVVYARSAMHFSANYRSAVIRGRAVEVTDHAARLDALRRIVEHTAPGSWDRVRPPSRKEMAATLVLAV
DLTEASVKVRTGDPRDDADDIAAGGVWAGVLPMRQVFDTPVPSADLAAGVPVPPSVLGRGAVAVG
>Mature_225_residues
MDATARPPLSPTPRSTPTRLKERARADRAALDAVLDAGFVCHLGVVLDGSPLVLPTVYGHDGAFLYLHGSTGAGNLRAAR
DAEVSVAVTHVDGVVYARSAMHFSANYRSAVIRGRAVEVTDHAARLDALRRIVEHTAPGSWDRVRPPSRKEMAATLVLAV
DLTEASVKVRTGDPRDDADDIAAGGVWAGVLPMRQVFDTPVPSADLAAGVPVPPSVLGRGAVAVG

Specific function: Unknown

COG id: COG3467

COG function: function code R; Predicted flavin-nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23562; Mature: 23562

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATARPPLSPTPRSTPTRLKERARADRAALDAVLDAGFVCHLGVVLDGSPLVLPTVYGH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECC
DGAFLYLHGSTGAGNLRAARDAEVSVAVTHVDGVVYARSAMHFSANYRSAVIRGRAVEVT
CCEEEEEECCCCCCCCEECCCCCEEEEEEEECCEEEHHHHHEECCCCHHHHHCCCEEEEH
DHAARLDALRRIVEHTAPGSWDRVRPPSRKEMAATLVLAVDLTEASVKVRTGDPRDDADD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEEEEEECCCEEEEECCCCCCCHHH
IAAGGVWAGVLPMRQVFDTPVPSADLAAGVPVPPSVLGRGAVAVG
HHCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHCCCCEECC
>Mature Secondary Structure
MDATARPPLSPTPRSTPTRLKERARADRAALDAVLDAGFVCHLGVVLDGSPLVLPTVYGH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECC
DGAFLYLHGSTGAGNLRAARDAEVSVAVTHVDGVVYARSAMHFSANYRSAVIRGRAVEVT
CCEEEEEECCCCCCCCEECCCCCEEEEEEEECCEEEHHHHHEECCCCHHHHHCCCEEEEH
DHAARLDALRRIVEHTAPGSWDRVRPPSRKEMAATLVLAVDLTEASVKVRTGDPRDDADD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEEEEEECCCEEEEECCCCCCCHHH
IAAGGVWAGVLPMRQVFDTPVPSADLAAGVPVPPSVLGRGAVAVG
HHCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA