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The map label for this gene is uidR [C]

Identifier: 54026986

GI number: 54026986

Start: 5226565

End: 5227215

Strand: Reverse

Name: uidR [C]

Synonym: nfa50120

Alternate gene names: 54026986

Gene position: 5227215-5226565 (Counterclockwise)

Preceding gene: 54026989

Following gene: 54026985

Centisome position: 86.81

GC content: 75.42

Gene sequence:

>651_bases
GTGCCGTATCGCAGAACCCCCGCCGTGCAGGCCAGGCTCGACGCCCAGGCCGGCCAGATCGTGCAGGCCGCGACCAGGGT
GCTGTCGGAGGCGGGCTTCGCGGGACTGTCGATGGCGGCGGTCGCGGCCAATGCCGGCGTGGCCACCGGCACCGTCTACA
AGCACTTCGCCGGCAAGGCCGAGCTGGTCACCGCCGTGTTCCGGGCCGTGGTCGCCCGCGAGGTGCACGCGGTCGCCGCC
GCCGCGGCCGAGGGCGGCGCCGTCGAGCGGGTGGTCGCCGCGGTGGAGACCTTCGCCGGCCGCGCCCTGAAGAACCCGAA
ACTGGCCTACGTGCTGCTGGCCGAACCGGTCGACGCGGTGGTCGACGCCGAGCGCCTGCGCTTCCGCCGCGCCTTCGCCG
ACGCCTTCGCCGCCGCCGTGTCCGACGGCGTCGCCGCCGGCGAGCTTCCCGGCCAGGACGCCCGCACCACCGCCGCCGCC
CTGGTCGGCGCGATCGGTGAGGTGCTCGTCGGCCCGCTGGCCGACGCCCCGCACAGCGAATCCGTCGTGCCCCAACTCGT
CACCTTCGCCCGGCGCGCACTCGGTGTGCCGGAGCGGGCTCGCGCGGCCACGACCGCGCCGGAAACAGGAGTGTCCGATG
CAGACTCATGA

Upstream 100 bases:

>100_bases
TCGACGTCCTCGCTCCGGCTCATCCCGTCGACGATAACCGCGCGGACCCGTCCCGCACGACCCCTTGCGTGAAGAAGTGA
AGCCGTGATTCACTTCTTGT

Downstream 100 bases:

>100_bases
GGTCTTCAACCAGGTCCCGAACATCGTGCCCTTCGACGTCTCGCGCAATCCCGCGCTGCTCGAGGGCCTGCACCGCGAGG
GCGCGGGCTGGGCCGAGGCC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MPYRRTPAVQARLDAQAGQIVQAATRVLSEAGFAGLSMAAVAANAGVATGTVYKHFAGKAELVTAVFRAVVAREVHAVAA
AAAEGGAVERVVAAVETFAGRALKNPKLAYVLLAEPVDAVVDAERLRFRRAFADAFAAAVSDGVAAGELPGQDARTTAAA
LVGAIGEVLVGPLADAPHSESVVPQLVTFARRALGVPERARAATTAPETGVSDADS

Sequences:

>Translated_216_residues
MPYRRTPAVQARLDAQAGQIVQAATRVLSEAGFAGLSMAAVAANAGVATGTVYKHFAGKAELVTAVFRAVVAREVHAVAA
AAAEGGAVERVVAAVETFAGRALKNPKLAYVLLAEPVDAVVDAERLRFRRAFADAFAAAVSDGVAAGELPGQDARTTAAA
LVGAIGEVLVGPLADAPHSESVVPQLVTFARRALGVPERARAATTAPETGVSDADS
>Mature_215_residues
PYRRTPAVQARLDAQAGQIVQAATRVLSEAGFAGLSMAAVAANAGVATGTVYKHFAGKAELVTAVFRAVVAREVHAVAAA
AAEGGAVERVVAAVETFAGRALKNPKLAYVLLAEPVDAVVDAERLRFRRAFADAFAAAVSDGVAAGELPGQDARTTAAAL
VGAIGEVLVGPLADAPHSESVVPQLVTFARRALGVPERARAATTAPETGVSDADS

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21880; Mature: 21749

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYRRTPAVQARLDAQAGQIVQAATRVLSEAGFAGLSMAAVAANAGVATGTVYKHFAGKA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCHH
ELVTAVFRAVVAREVHAVAAAAAEGGAVERVVAAVETFAGRALKNPKLAYVLLAEPVDAV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH
VDAERLRFRRAFADAFAAAVSDGVAAGELPGQDARTTAAALVGAIGEVLVGPLADAPHSE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SVVPQLVTFARRALGVPERARAATTAPETGVSDADS
HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PYRRTPAVQARLDAQAGQIVQAATRVLSEAGFAGLSMAAVAANAGVATGTVYKHFAGKA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCHH
ELVTAVFRAVVAREVHAVAAAAAEGGAVERVVAAVETFAGRALKNPKLAYVLLAEPVDAV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH
VDAERLRFRRAFADAFAAAVSDGVAAGELPGQDARTTAAALVGAIGEVLVGPLADAPHSE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SVVPQLVTFARRALGVPERARAATTAPETGVSDADS
HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA