Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026858

Identifier: 54026858

GI number: 54026858

Start: 5097423

End: 5098394

Strand: Reverse

Name: 54026858

Synonym: nfa48840

Alternate gene names: NA

Gene position: 5098394-5097423 (Counterclockwise)

Preceding gene: 54026859

Following gene: 54026851

Centisome position: 84.67

GC content: 71.5

Gene sequence:

>972_bases
ATGACCGCACCGACCCTGGAAGTGCACCTCACCGACACCGATCTCACCGCCGCGTTGCGCGCCGACGCCGAACGCGGCCT
CACCGCACAGCCGAAAACGTTGCCGCCCAAATGGTTCTACGATGCCCGCGGCAGCGAGCTGTTCGAACGGATCACCGAGC
TGCCCGAGTACTACCCGACCCGCACCGAGCGGGCACTGCTCGAGCGCGTCGTCGACGAGATCGCCCGGCTCGCGCAGGCC
GAGATCCTGGTGGAACTCGGGGCAGGCTCGGCGGCCAAGACCCGGCTGCTGCTGCACGCGCTCACCGGCGCCGGACCGCT
GCGCACCTACGTGCCGCAGGACGTGTCCTCGGTGGCGCTGCGAGCCGCGGCGGCGGAGGTGGCCGCCGACTTCCCCGGCC
TGGCCGTGCACGGGGTGGTCAGCGACTTCACCGACACCCTGCACAACCTGCCGCGCGGCGGCAGACGGATGATCGCCTTC
CTCGGCGGCACCATCGGCAATCTCGTCCCCGCCGAACGCGCCGAATTCCTGACCGGCATCCACGACGTGCTCGAACCGGG
AGAGCGGCTGCTGCTCGGCGCGGGCCTGGTGATCGACCCGGCCGTGCTCGTGCCCGCCTACGACGACGCCGCCGGCGTCA
CCGCCGAGTTCAACCGCAACGTGCTGCACGTGCTCAACCACCGGCTGCGCGCCGACTTCGTGCCCGAGGACTTCGCGCAC
GTCGCGCTGTGGGACGCCGAGCACGAGTGGATCGAGATGCGGCTGGCGGCGACCCGCGACATGACGGTCACCGTCGCCGA
CCTCGGGCTCACGGTGTCGTTCGCCCGCGGCGAGCAGATGCGCACCGAGATCTCCGCCAAGTTCCGCGTCCCCGGCCTGT
CGGCCGAGCTGGCGGCCGCCGGATTCCGTGCCGAGCAGGTGTGGACCGACCCCGACGAGCGGTTCGCGCTGGTACTCGCG
ACGCGGGTGTGA

Upstream 100 bases:

>100_bases
AGCCGATCCCCGATCACTGCCTGGTCCGGGCGGAGCCGGGCCGGCTCGCCGTCGAACCACTCACCGGCGTCCCCGCCGCG
CACACCGAAAGGCCGCTCGC

Downstream 100 bases:

>100_bases
ACGAGACGGCTCACTCCCTCACGCGTTGGCCGGCCCGACCACGGCGGTGAGCCACTCCACCAGCGGTCGCAAGGCTTCCC
AGGCCGCGCGCACCTCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: S-Adenosyl-L-Methionine-Dependent Methyltransferase; S-Adenosyl-L-Methionine-Dependentmethyltransferase; Methyltransferase Type; Conserved Domain Protein; Conserved Protein

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTAPTLEVHLTDTDLTAALRADAERGLTAQPKTLPPKWFYDARGSELFERITELPEYYPTRTERALLERVVDEIARLAQA
EILVELGAGSAAKTRLLLHALTGAGPLRTYVPQDVSSVALRAAAAEVAADFPGLAVHGVVSDFTDTLHNLPRGGRRMIAF
LGGTIGNLVPAERAEFLTGIHDVLEPGERLLLGAGLVIDPAVLVPAYDDAAGVTAEFNRNVLHVLNHRLRADFVPEDFAH
VALWDAEHEWIEMRLAATRDMTVTVADLGLTVSFARGEQMRTEISAKFRVPGLSAELAAAGFRAEQVWTDPDERFALVLA
TRV

Sequences:

>Translated_323_residues
MTAPTLEVHLTDTDLTAALRADAERGLTAQPKTLPPKWFYDARGSELFERITELPEYYPTRTERALLERVVDEIARLAQA
EILVELGAGSAAKTRLLLHALTGAGPLRTYVPQDVSSVALRAAAAEVAADFPGLAVHGVVSDFTDTLHNLPRGGRRMIAF
LGGTIGNLVPAERAEFLTGIHDVLEPGERLLLGAGLVIDPAVLVPAYDDAAGVTAEFNRNVLHVLNHRLRADFVPEDFAH
VALWDAEHEWIEMRLAATRDMTVTVADLGLTVSFARGEQMRTEISAKFRVPGLSAELAAAGFRAEQVWTDPDERFALVLA
TRV
>Mature_322_residues
TAPTLEVHLTDTDLTAALRADAERGLTAQPKTLPPKWFYDARGSELFERITELPEYYPTRTERALLERVVDEIARLAQAE
ILVELGAGSAAKTRLLLHALTGAGPLRTYVPQDVSSVALRAAAAEVAADFPGLAVHGVVSDFTDTLHNLPRGGRRMIAFL
GGTIGNLVPAERAEFLTGIHDVLEPGERLLLGAGLVIDPAVLVPAYDDAAGVTAEFNRNVLHVLNHRLRADFVPEDFAHV
ALWDAEHEWIEMRLAATRDMTVTVADLGLTVSFARGEQMRTEISAKFRVPGLSAELAAAGFRAEQVWTDPDERFALVLAT
RV

Specific function: Unknown

COG id: COG4301

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35142; Mature: 35011

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPTLEVHLTDTDLTAALRADAERGLTAQPKTLPPKWFYDARGSELFERITELPEYYPT
CCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCC
RTERALLERVVDEIARLAQAEILVELGAGSAAKTRLLLHALTGAGPLRTYVPQDVSSVAL
HHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHH
RAAAAEVAADFPGLAVHGVVSDFTDTLHNLPRGGRRMIAFLGGTIGNLVPAERAEFLTGI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHH
HDVLEPGERLLLGAGLVIDPAVLVPAYDDAAGVTAEFNRNVLHVLNHRLRADFVPEDFAH
HHHHCCCCCEEEECCCEECCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCE
VALWDAEHEWIEMRLAATRDMTVTVADLGLTVSFARGEQMRTEISAKFRVPGLSAELAAA
EEEECCCHHHHHHHEEECCCCEEEEEECCEEEEECCCHHHHHHHHHEEECCCCCHHHHHH
GFRAEQVWTDPDERFALVLATRV
CCCHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TAPTLEVHLTDTDLTAALRADAERGLTAQPKTLPPKWFYDARGSELFERITELPEYYPT
CCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCC
RTERALLERVVDEIARLAQAEILVELGAGSAAKTRLLLHALTGAGPLRTYVPQDVSSVAL
HHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHH
RAAAAEVAADFPGLAVHGVVSDFTDTLHNLPRGGRRMIAFLGGTIGNLVPAERAEFLTGI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHH
HDVLEPGERLLLGAGLVIDPAVLVPAYDDAAGVTAEFNRNVLHVLNHRLRADFVPEDFAH
HHHHCCCCCEEEECCCEECCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCE
VALWDAEHEWIEMRLAATRDMTVTVADLGLTVSFARGEQMRTEISAKFRVPGLSAELAAA
EEEECCCHHHHHHHEEECCCCEEEEEECCEEEEECCCHHHHHHHHHEEECCCCCHHHHHH
GFRAEQVWTDPDERFALVLATRV
CCCHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA