| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026797
Identifier: 54026797
GI number: 54026797
Start: 5038802
End: 5039089
Strand: Reverse
Name: 54026797
Synonym: nfa48230
Alternate gene names: NA
Gene position: 5039089-5038802 (Counterclockwise)
Preceding gene: 54026798
Following gene: 54026796
Centisome position: 83.69
GC content: 70.83
Gene sequence:
>288_bases GTGATTCTCGAGCTTCTCGCGCAGACACCGGGCACGCCGACCGGGCCCGAATTCGGCAAGGCGTCGCCGCTGGGGCTGGC CATCGTGCTGCTCCTGCTGGTGGGCACCTTCCTGCTGGTGCGGTCGATGAACCGGCACCTGAAGAACCTGCCGCCCACCT TCGAACCCGAGCATCCCGAGCCGGATCAGGCCGCCGACGAGGGCACCGACCCCGGAGCGGTGCGCCTCGAGGACACCGCC GAACCCGACACCGGCACCGATCGCTCGCCGAAGCCCGACCGCGGCTGA
Upstream 100 bases:
>100_bases AGCGGCTGTGGCCGACCGAGGAGTTCGAGTTGGCCAAGACCCGGGTGCGCACCTCCATCCCGGAGACCGACCTGTTCGCC GGTATCGAGGACGCGCAGCG
Downstream 100 bases:
>100_bases TTCCCCTGCTGACGGCGCACAACGGTGCGCCGCAAGCCTTTTCGACCCGCCACCACGCTCGTCGCGGCACCTGTCGCCGG TCGCCCGCCCGTGGTTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MILELLAQTPGTPTGPEFGKASPLGLAIVLLLLVGTFLLVRSMNRHLKNLPPTFEPEHPEPDQAADEGTDPGAVRLEDTA EPDTGTDRSPKPDRG
Sequences:
>Translated_95_residues MILELLAQTPGTPTGPEFGKASPLGLAIVLLLLVGTFLLVRSMNRHLKNLPPTFEPEHPEPDQAADEGTDPGAVRLEDTA EPDTGTDRSPKPDRG >Mature_95_residues MILELLAQTPGTPTGPEFGKASPLGLAIVLLLLVGTFLLVRSMNRHLKNLPPTFEPEHPEPDQAADEGTDPGAVRLEDTA EPDTGTDRSPKPDRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10137; Mature: 10137
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILELLAQTPGTPTGPEFGKASPLGLAIVLLLLVGTFLLVRSMNRHLKNLPPTFEPEHPE CHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PDQAADEGTDPGAVRLEDTAEPDTGTDRSPKPDRG CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MILELLAQTPGTPTGPEFGKASPLGLAIVLLLLVGTFLLVRSMNRHLKNLPPTFEPEHPE CHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PDQAADEGTDPGAVRLEDTAEPDTGTDRSPKPDRG CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA