Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026746

Identifier: 54026746

GI number: 54026746

Start: 4982289

End: 4983371

Strand: Reverse

Name: 54026746

Synonym: nfa47720

Alternate gene names: NA

Gene position: 4983371-4982289 (Counterclockwise)

Preceding gene: 54026747

Following gene: 54026745

Centisome position: 82.76

GC content: 76.08

Gene sequence:

>1083_bases
ATGAGCGCTGACCTCGCCGTCGCGCTGCGCCGACTGGAACAGGAGGGACGCACCGGCGTGCTGCGGGCGGGGGACGGCGA
ATTCCACCTCGCCGACGGGGTCATCGCCTCGGCCCACTGCCGTCGCGCCACCGGGCTGGACCGGCTGGTGGTGGCGGCGG
GCGTCGCCACCCCGGAGGACTGGCAGCGGGCGGGGGCGGGCGATCCGAGCCGGGTGCTGGCGCAACCGCAACTGGAAACG
CTTGCGCTGCTGTCGGTTTACGACGCCGCCTATTTCCTGCTCGCCTCGACCGCGGAACCGGAGTTCCGGCCCGCGCCCCC
GCACTGGCTGGCCGGGGTCTGTCATGTGCGGCCGCGCGAACTGGTGCGCGAGTGTGCGCGGCGCGGTGATCCGGAGTCGG
GGCCGTGGCCCGCCGAACTGGTCGACCGGGTGCCGGTGGTCCCGGTGCGCCGGGTGCACCGCCGCCGGGTGGTGCTCACC
GCGGGACAGGTGGAGGTGCTCGCGGCCGCCGACGCCCGCCGCAGCATCACCGACATCGCGCGGGATCTCGGGCGCACGAC
CTACGGGTGTCTCGCGGCGGTGCGCGAGCTGACCGCCGCGGGGCTGATCGAATCTCCTGCGGCGCAATGGAAGAGGGTGA
GCCCGGAGGTCACGCCGGAGCGCCGGGCGGCCGGGTACGCCATCGGTGCGGAACCGCCGGCGGGCCGGGGCGCCGAGCGG
TCCACGGGACGGCATTCGATCGATCGCGTCCGAACGAACCCTGGCCCGCCTCGCGCGACGGCGCTGTCCCCGGTCGCCGC
CCAGCAGGCCGCCGCGGAGACGGCCCGGAACGCCGTCGCGGCGGCGATGGAGGCCGCCCGGCACGCGCCACCCCGGATGC
GGCCGCCCGGCGGCGACACGCGCCGAGCCCGGACCGGGCCGGACACCGCCCGCGACACCCCGCGCGACCCGAAATCCGCA
CCGCCGCCACCACTTCGACGCCGGGTGCGGCAGCCGGTACCCACTCCCGGTCCGGACCGATGGGAGCCGGTGGATGTGAA
CGTGCTCGTCCGCGTGCGGGCGGCATTGGAGGAGCTTGCGTGA

Upstream 100 bases:

>100_bases
CGAATCTTCGTGCACGTGGTGTGTGACGAGGCTACCGGGAATCTCGGGCTCGCGCGCTATCAGCTGACGACGATCCTCAC
CGAATTCGTCGAGGGCGACG

Downstream 100 bases:

>100_bases
CCGCGCGGAAGAAACTGCTCGGCGATTGGATGGGAAGGTTGACCAAGGTGGCGATGTCCGGACCCGAACCGTACGCGGTG
GTGCTGGCGGAGCTGAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSADLAVALRRLEQEGRTGVLRAGDGEFHLADGVIASAHCRRATGLDRLVVAAGVATPEDWQRAGAGDPSRVLAQPQLET
LALLSVYDAAYFLLASTAEPEFRPAPPHWLAGVCHVRPRELVRECARRGDPESGPWPAELVDRVPVVPVRRVHRRRVVLT
AGQVEVLAAADARRSITDIARDLGRTTYGCLAAVRELTAAGLIESPAAQWKRVSPEVTPERRAAGYAIGAEPPAGRGAER
STGRHSIDRVRTNPGPPRATALSPVAAQQAAAETARNAVAAAMEAARHAPPRMRPPGGDTRRARTGPDTARDTPRDPKSA
PPPPLRRRVRQPVPTPGPDRWEPVDVNVLVRVRAALEELA

Sequences:

>Translated_360_residues
MSADLAVALRRLEQEGRTGVLRAGDGEFHLADGVIASAHCRRATGLDRLVVAAGVATPEDWQRAGAGDPSRVLAQPQLET
LALLSVYDAAYFLLASTAEPEFRPAPPHWLAGVCHVRPRELVRECARRGDPESGPWPAELVDRVPVVPVRRVHRRRVVLT
AGQVEVLAAADARRSITDIARDLGRTTYGCLAAVRELTAAGLIESPAAQWKRVSPEVTPERRAAGYAIGAEPPAGRGAER
STGRHSIDRVRTNPGPPRATALSPVAAQQAAAETARNAVAAAMEAARHAPPRMRPPGGDTRRARTGPDTARDTPRDPKSA
PPPPLRRRVRQPVPTPGPDRWEPVDVNVLVRVRAALEELA
>Mature_359_residues
SADLAVALRRLEQEGRTGVLRAGDGEFHLADGVIASAHCRRATGLDRLVVAAGVATPEDWQRAGAGDPSRVLAQPQLETL
ALLSVYDAAYFLLASTAEPEFRPAPPHWLAGVCHVRPRELVRECARRGDPESGPWPAELVDRVPVVPVRRVHRRRVVLTA
GQVEVLAAADARRSITDIARDLGRTTYGCLAAVRELTAAGLIESPAAQWKRVSPEVTPERRAAGYAIGAEPPAGRGAERS
TGRHSIDRVRTNPGPPRATALSPVAAQQAAAETARNAVAAAMEAARHAPPRMRPPGGDTRRARTGPDTARDTPRDPKSAP
PPPLRRRVRQPVPTPGPDRWEPVDVNVLVRVRAALEELA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38636; Mature: 38505

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADLAVALRRLEQEGRTGVLRAGDGEFHLADGVIASAHCRRATGLDRLVVAAGVATPED
CCCHHHHHHHHHHHCCCCCEEECCCCCEEECCCCHHHHHHHHHCCHHHHHHHHCCCCCHH
WQRAGAGDPSRVLAQPQLETLALLSVYDAAYFLLASTAEPEFRPAPPHWLAGVCHVRPRE
HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHH
LVRECARRGDPESGPWPAELVDRVPVVPVRRVHRRRVVLTAGQVEVLAAADARRSITDIA
HHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHCEEEEECCCEEEEEHHHHHHHHHHHH
RDLGRTTYGCLAAVRELTAAGLIESPAAQWKRVSPEVTPERRAAGYAIGAEPPAGRGAER
HHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHCCEECCCCCCCCCCCCC
STGRHSIDRVRTNPGPPRATALSPVAAQQAAAETARNAVAAAMEAARHAPPRMRPPGGDT
CCCHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RRARTGPDTARDTPRDPKSAPPPPLRRRVRQPVPTPGPDRWEPVDVNVLVRVRAALEELA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SADLAVALRRLEQEGRTGVLRAGDGEFHLADGVIASAHCRRATGLDRLVVAAGVATPED
CCHHHHHHHHHHHCCCCCEEECCCCCEEECCCCHHHHHHHHHCCHHHHHHHHCCCCCHH
WQRAGAGDPSRVLAQPQLETLALLSVYDAAYFLLASTAEPEFRPAPPHWLAGVCHVRPRE
HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHH
LVRECARRGDPESGPWPAELVDRVPVVPVRRVHRRRVVLTAGQVEVLAAADARRSITDIA
HHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHCEEEEECCCEEEEEHHHHHHHHHHHH
RDLGRTTYGCLAAVRELTAAGLIESPAAQWKRVSPEVTPERRAAGYAIGAEPPAGRGAER
HHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHCCEECCCCCCCCCCCCC
STGRHSIDRVRTNPGPPRATALSPVAAQQAAAETARNAVAAAMEAARHAPPRMRPPGGDT
CCCHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RRARTGPDTARDTPRDPKSAPPPPLRRRVRQPVPTPGPDRWEPVDVNVLVRVRAALEELA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA