Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026744

Identifier: 54026744

GI number: 54026744

Start: 4981433

End: 4981804

Strand: Reverse

Name: 54026744

Synonym: nfa47700

Alternate gene names: NA

Gene position: 4981804-4981433 (Counterclockwise)

Preceding gene: 54026745

Following gene: 54026741

Centisome position: 82.74

GC content: 63.71

Gene sequence:

>372_bases
ATGACCAATATGGATCTGGCCCTCAAGGACATGATGGTGATCGACGGGGCCGTGGGCGCCGCGGTGGTCGACTACAACTC
CGGCATGGCGCTCGGCATGCTCGGCAGCTCCAAATCGCTGGACCTGCAGATCGCCGCGGCGGGCAACACCGAGGTGATGC
GCGCGAAGATGCGCACCATGGACCAGCTCGGCCTCAGCGACGAGATCGAGGACATCCTCATCACCCTCTCCGGCCAGTAC
CACATCATCCGGCCCATGACCGGGCGCAAATCCAAGGGCCTGTTCCTCTATCTCGCGCTCGATCGCGGCCGGGCCAATTT
GGCGCTGGCCCGGCACCGGCTCAAGGGGATCGAAGAAGATCTCGAGATCTAG

Upstream 100 bases:

>100_bases
AGTCGCGGCCGGTGGCCCGCGCCATCGCCGACCACCTGGCCGTGCTGGCGAACGGGCCGAGACACAAGCAGCCGACGAAA
ACCGATTGAAAGGAACGGAA

Downstream 100 bases:

>100_bases
CGCTCCCGGTAGCGCTCACGCCGACAGGCGGTAGAAACGCCAGAAGCCGAAATCCTCGATCGGCAGGATCTCCACCTCCG
CGAAACCGGCCTCGCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTNMDLALKDMMVIDGAVGAAVVDYNSGMALGMLGSSKSLDLQIAAAGNTEVMRAKMRTMDQLGLSDEIEDILITLSGQY
HIIRPMTGRKSKGLFLYLALDRGRANLALARHRLKGIEEDLEI

Sequences:

>Translated_123_residues
MTNMDLALKDMMVIDGAVGAAVVDYNSGMALGMLGSSKSLDLQIAAAGNTEVMRAKMRTMDQLGLSDEIEDILITLSGQY
HIIRPMTGRKSKGLFLYLALDRGRANLALARHRLKGIEEDLEI
>Mature_122_residues
TNMDLALKDMMVIDGAVGAAVVDYNSGMALGMLGSSKSLDLQIAAAGNTEVMRAKMRTMDQLGLSDEIEDILITLSGQYH
IIRPMTGRKSKGLFLYLALDRGRANLALARHRLKGIEEDLEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13398; Mature: 13267

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNMDLALKDMMVIDGAVGAAVVDYNSGMALGMLGSSKSLDLQIAAAGNTEVMRAKMRTM
CCCCCHHHHHHEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHH
DQLGLSDEIEDILITLSGQYHIIRPMTGRKSKGLFLYLALDRGRANLALARHRLKGIEED
HHCCCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCHHH
LEI
CCC
>Mature Secondary Structure 
TNMDLALKDMMVIDGAVGAAVVDYNSGMALGMLGSSKSLDLQIAAAGNTEVMRAKMRTM
CCCCHHHHHHEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHH
DQLGLSDEIEDILITLSGQYHIIRPMTGRKSKGLFLYLALDRGRANLALARHRLKGIEED
HHCCCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCHHH
LEI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA