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The map label for this gene is oppA [C]

Identifier: 54026732

GI number: 54026732

Start: 4969495

End: 4971276

Strand: Reverse

Name: oppA [C]

Synonym: nfa47580

Alternate gene names: 54026732

Gene position: 4971276-4969495 (Counterclockwise)

Preceding gene: 54026733

Following gene: 54026731

Centisome position: 82.56

GC content: 73.63

Gene sequence:

>1782_bases
GTGCGGGACGTGAATTCGGGGGCGAGACGACGCGCGATGCTGCGCGTGCTGCAGATCCTGCTGGCGGCCTCCGTCCTGGT
GGTGGCCGGATGCACCGCGAATCCGCCCCCGCCGATCGAGAGCACCGACAGCCCGAAGACGACACCGGCCAAACCGGGCA
AGAACACCGTCGTGGTAGCGATCGACGACATCGGCATCGGGTTCAACCCGCATCTGCGCGCCGATCAGTCGCCCGCCACC
TCGGCGGTCAGCGCCATGGTGCTGCCCAGCCCGTTCCGCCCGGTGCCGGATCCGGCGGTACCGGGTGCGACGCAGTGGGT
GCCGGACACGGCGCTGGTGACGGCGGCCGAGGTCACCGCGCAGGAGCCGTTCACCATCACCTACACGCTGCGCAATCAGG
CCAACTGGTCCGACGGCGCACCCATCGCCGCGGAGGACTTCCGGTTCCTGTGGCAGCAGATGATCACCCAGCCCGGGGTG
GTGGATTCGGCGGCCTACCGGCTGATCTCGGATGTCAGCTCCTCCGGCGGCGGCAAGACGGTGACGGTGGTGCTGACCCA
GCCGTATCCGGCGTGGCGGGAACTGTTCGCCAACCTGCTGCCCTCGCACCTGATCAAGGACCAGCCGGGCGGGTTCGTCA
ACGGGCTGGCCGAGGGCATTCCGGTCTCCGGCGGCAACTTCTCGATCAAGTCGGTGGACCCCGGCCGCGACGAGATCCTG
CTCGAACGCAACGACCGCTACTGGGGCACCCCGGCCGCGCCGGACCAGATCCTGTTGCGGCGCGGCGGGACTCCCGCGCA
GCTGGCCGACTCGCTGCGCACCGGCGACGCCCAGATGGCGCTGGTGCACGGTGGCGTCGCCACCCAGGCGCAGCTGGCGG
CGATCCCGTCGGTGCGGACCGCGATCATGCCGCAGTCGCGCACGTTGCAGCTGGTGCTCAACGGCCGCAACCCGGACCTG
GCCGACCCGCGGGTGCGTCGCGGCGTGCTGGCGCTGCTCGATCCGGCGCTGCTGGCGACGGTGGGCGCGCAGACCGGCGG
CTGGGTGGAACCGGTACGCGCCCAGATCCTCTCGCCCTCCGACCCCGGCTACACCCCCACCCAGCCGCCGCGGCCGAGCC
CGGAGGAGGCGTTCGCGCTGCTGGCCGAGGCCGGGTTCGCGCGGGCGCCGGAGCCGCCGCAGGCGGTCTCGCCGACCTCA
CCCGCGCCGCAGCCGCGTCCGCTGGCCCGTGACGGCCGGTCGCTGGCGGTGCGGATCGGGGCCGTGGTGGGCGATGCCAC
CGCGCACGCCGTCGCCAGCACCGCCGCCGACCAACTGCGCAGCGCGGGCATCGATGCGAGCGTGCGCACCCTCACCGCCG
ACGCGCTCTACGGCAAGGAACTGGTCGACGGCGGCGTGGACGCCGTCGTCGGCTGGGAGGTCGCCGGCGGTGATCCGGCC
ACCGTGCTGGCCTCGCGGTACGGCTGCCCGCCCAGCGGCGCGCCGGTGCCGGACGGCGAGGCGGAGGCGGTGCTGGAGGC
GGCGCGCCGGGCGCCGAGCAATCTGTCCGGACTGTGCGACGTGGCGTTGCAGCCCGCCATCGACGCGGCCCTGCGCGGCA
TCGATGTGCCCAAGGTGCTCGCCGACGCGGAACCGGCGCTGTGGGGCCTGTCGACGGTGCTGCCGATCGTGCAGGACAAC
CTGGTGGCCGCCGCCGGGCCCGGCGTCGACGGCGCCGCGCTGAACGGCGCGATCCAGGTCGGCATCTTCGGGGACGCGGC
GATGTGGCGGAGGATCCCGTGA

Upstream 100 bases:

>100_bases
GGCCCCGACGTGGTGCGGGTGCGCAAGGTCATCCTCAACGCCAACGAGCGCGCCCGCGAGCTGTCGCGGCGGAAGGCACG
GGACCGGGCCGCGTTGTAGA

Downstream 100 bases:

>100_bases
GTACGGCGACCGGCGGGCTGCTGCTGGTGCACGCGCACCCCGACGACGAGACCATCACCACCGGTGGCACCATCGCCCGC
TACCGCGCCCGCGGCGTCCC

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MRDVNSGARRRAMLRVLQILLAASVLVVAGCTANPPPPIESTDSPKTTPAKPGKNTVVVAIDDIGIGFNPHLRADQSPAT
SAVSAMVLPSPFRPVPDPAVPGATQWVPDTALVTAAEVTAQEPFTITYTLRNQANWSDGAPIAAEDFRFLWQQMITQPGV
VDSAAYRLISDVSSSGGGKTVTVVLTQPYPAWRELFANLLPSHLIKDQPGGFVNGLAEGIPVSGGNFSIKSVDPGRDEIL
LERNDRYWGTPAAPDQILLRRGGTPAQLADSLRTGDAQMALVHGGVATQAQLAAIPSVRTAIMPQSRTLQLVLNGRNPDL
ADPRVRRGVLALLDPALLATVGAQTGGWVEPVRAQILSPSDPGYTPTQPPRPSPEEAFALLAEAGFARAPEPPQAVSPTS
PAPQPRPLARDGRSLAVRIGAVVGDATAHAVASTAADQLRSAGIDASVRTLTADALYGKELVDGGVDAVVGWEVAGGDPA
TVLASRYGCPPSGAPVPDGEAEAVLEAARRAPSNLSGLCDVALQPAIDAALRGIDVPKVLADAEPALWGLSTVLPIVQDN
LVAAAGPGVDGAALNGAIQVGIFGDAAMWRRIP

Sequences:

>Translated_593_residues
MRDVNSGARRRAMLRVLQILLAASVLVVAGCTANPPPPIESTDSPKTTPAKPGKNTVVVAIDDIGIGFNPHLRADQSPAT
SAVSAMVLPSPFRPVPDPAVPGATQWVPDTALVTAAEVTAQEPFTITYTLRNQANWSDGAPIAAEDFRFLWQQMITQPGV
VDSAAYRLISDVSSSGGGKTVTVVLTQPYPAWRELFANLLPSHLIKDQPGGFVNGLAEGIPVSGGNFSIKSVDPGRDEIL
LERNDRYWGTPAAPDQILLRRGGTPAQLADSLRTGDAQMALVHGGVATQAQLAAIPSVRTAIMPQSRTLQLVLNGRNPDL
ADPRVRRGVLALLDPALLATVGAQTGGWVEPVRAQILSPSDPGYTPTQPPRPSPEEAFALLAEAGFARAPEPPQAVSPTS
PAPQPRPLARDGRSLAVRIGAVVGDATAHAVASTAADQLRSAGIDASVRTLTADALYGKELVDGGVDAVVGWEVAGGDPA
TVLASRYGCPPSGAPVPDGEAEAVLEAARRAPSNLSGLCDVALQPAIDAALRGIDVPKVLADAEPALWGLSTVLPIVQDN
LVAAAGPGVDGAALNGAIQVGIFGDAAMWRRIP
>Mature_593_residues
MRDVNSGARRRAMLRVLQILLAASVLVVAGCTANPPPPIESTDSPKTTPAKPGKNTVVVAIDDIGIGFNPHLRADQSPAT
SAVSAMVLPSPFRPVPDPAVPGATQWVPDTALVTAAEVTAQEPFTITYTLRNQANWSDGAPIAAEDFRFLWQQMITQPGV
VDSAAYRLISDVSSSGGGKTVTVVLTQPYPAWRELFANLLPSHLIKDQPGGFVNGLAEGIPVSGGNFSIKSVDPGRDEIL
LERNDRYWGTPAAPDQILLRRGGTPAQLADSLRTGDAQMALVHGGVATQAQLAAIPSVRTAIMPQSRTLQLVLNGRNPDL
ADPRVRRGVLALLDPALLATVGAQTGGWVEPVRAQILSPSDPGYTPTQPPRPSPEEAFALLAEAGFARAPEPPQAVSPTS
PAPQPRPLARDGRSLAVRIGAVVGDATAHAVASTAADQLRSAGIDASVRTLTADALYGKELVDGGVDAVVGWEVAGGDPA
TVLASRYGCPPSGAPVPDGEAEAVLEAARRAPSNLSGLCDVALQPAIDAALRGIDVPKVLADAEPALWGLSTVLPIVQDN
LVAAAGPGVDGAALNGAIQVGIFGDAAMWRRIP

Specific function: May directly or indirectly regulate the accessibility of the key branch point intermediate, monoacyl phosphatidylinositol tetramannoside (AcPIM4), to the elongating alpha-1,6 mannosyltransferases which could regulate the lipoarabinomannans (LAMs) biosynth

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

None

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61397; Mature: 61397

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDVNSGARRRAMLRVLQILLAASVLVVAGCTANPPPPIESTDSPKTTPAKPGKNTVVVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
IDDIGIGFNPHLRADQSPATSAVSAMVLPSPFRPVPDPAVPGATQWVPDTALVTAAEVTA
EECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
QEPFTITYTLRNQANWSDGAPIAAEDFRFLWQQMITQPGVVDSAAYRLISDVSSSGGGKT
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEE
VTVVLTQPYPAWRELFANLLPSHLIKDQPGGFVNGLAEGIPVSGGNFSIKSVDPGRDEIL
EEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCEE
LERNDRYWGTPAAPDQILLRRGGTPAQLADSLRTGDAQMALVHGGVATQAQLAAIPSVRT
EECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCHHH
AIMPQSRTLQLVLNGRNPDLADPRVRRGVLALLDPALLATVGAQTGGWVEPVRAQILSPS
HHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEECCC
DPGYTPTQPPRPSPEEAFALLAEAGFARAPEPPQAVSPTSPAPQPRPLARDGRSLAVRIG
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
AVVGDATAHAVASTAADQLRSAGIDASVRTLTADALYGKELVDGGVDAVVGWEVAGGDPA
EHHCCHHHHHHHHHHHHHHHHCCCCCHHHHEEHHHHHHHHHHCCCCCEEEEEEECCCCHH
TVLASRYGCPPSGAPVPDGEAEAVLEAARRAPSNLSGLCDVALQPAIDAALRGIDVPKVL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
ADAEPALWGLSTVLPIVQDNLVAAAGPGVDGAALNGAIQVGIFGDAAMWRRIP
HCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEECCHHHHHCCC
>Mature Secondary Structure
MRDVNSGARRRAMLRVLQILLAASVLVVAGCTANPPPPIESTDSPKTTPAKPGKNTVVVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
IDDIGIGFNPHLRADQSPATSAVSAMVLPSPFRPVPDPAVPGATQWVPDTALVTAAEVTA
EECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
QEPFTITYTLRNQANWSDGAPIAAEDFRFLWQQMITQPGVVDSAAYRLISDVSSSGGGKT
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEE
VTVVLTQPYPAWRELFANLLPSHLIKDQPGGFVNGLAEGIPVSGGNFSIKSVDPGRDEIL
EEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCEE
LERNDRYWGTPAAPDQILLRRGGTPAQLADSLRTGDAQMALVHGGVATQAQLAAIPSVRT
EECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCHHH
AIMPQSRTLQLVLNGRNPDLADPRVRRGVLALLDPALLATVGAQTGGWVEPVRAQILSPS
HHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEECCC
DPGYTPTQPPRPSPEEAFALLAEAGFARAPEPPQAVSPTSPAPQPRPLARDGRSLAVRIG
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
AVVGDATAHAVASTAADQLRSAGIDASVRTLTADALYGKELVDGGVDAVVGWEVAGGDPA
EHHCCHHHHHHHHHHHHHHHHCCCCCHHHHEEHHHHHHHHHHCCCCCEEEEEEECCCCHH
TVLASRYGCPPSGAPVPDGEAEAVLEAARRAPSNLSGLCDVALQPAIDAALRGIDVPKVL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
ADAEPALWGLSTVLPIVQDNLVAAAGPGVDGAALNGAIQVGIFGDAAMWRRIP
HCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEECCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA