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The map label for this gene is mshB

Identifier: 54026731

GI number: 54026731

Start: 4968602

End: 4969498

Strand: Reverse

Name: mshB

Synonym: nfa47570

Alternate gene names: 54026731

Gene position: 4969498-4968602 (Counterclockwise)

Preceding gene: 54026732

Following gene: 54026730

Centisome position: 82.53

GC content: 75.25

Gene sequence:

>897_bases
GTGAGTACGGCGACCGGCGGGCTGCTGCTGGTGCACGCGCACCCCGACGACGAGACCATCACCACCGGTGGCACCATCGC
CCGCTACCGCGCCCGCGGCGTCCCGGTGACCGTGGTGACCTGCACGCTAGGCGAAGAGGGCGAGGTCATCGGCGAGCAGT
GGGCGCAGCTGGCCGCGGATCGGGCCGACCAGCTGGGCGGTTACCGCATCCTCGAACTCACCAGGGCGCTCGACGCGTTG
GACGCCGGACCGCCGCGGTTCCTCGGCGGTGCCGGGCGGTGGCGCGACTCGGGGATGGCGGGCACCCCGTCGGCCGAGCA
TCCGCGCGCCTTCGTCAACTCCGGTCCGGAGGCGGTCGAGGCACTCGTCGAGGTGCTGCTCGACCTGCGGCCGCGGGTGG
TGGTGGGGTACGACCCGAACGGCGGCTACGGCCATCCCGACCACATCCGCGCGCACCGGGTGACCACCGAGGCGGTGCGG
GCGGCCGCCGAGCGCGGCTGGGACGTGCCGAAGTTCTACTGGACCGTCACCGACGCCGACATGCTGCGCCTGCACACCGA
GGCACTCGCCCGGCGCACGGCCGCGGGCCTGCCGGGCGCACTGCCGCGCGGCTGGCGGCTGCCCGCGGCGGACGAGCTGG
CCTGCGTCGCCAGCGACACCGTCACCACCACCGTCGACGTCGCGGAGGTGCTGGCGGCCAAGCGGGCCGCGCTGCGCGCG
CACGCCACCCAGATCACCGTCGCGCCCTCGGGCCGGGAGTTCGCGCTGTCGAACAACATCGCCCAGCCGGTGCTGCCCGA
GGAGCACTACGTGCTGGTGCGCGGCAGGCGCGGTCCCGCCGGGCCGGACGGGCGCGAACACGATCTGTTCGCCGGGCTGG
ACGGCCCCGCCACCTAG

Upstream 100 bases:

>100_bases
ACCTGGTGGCCGCCGCCGGGCCCGGCGTCGACGGCGCCGCGCTGAACGGCGCGATCCAGGTCGGCATCTTCGGGGACGCG
GCGATGTGGCGGAGGATCCC

Downstream 100 bases:

>100_bases
ACTCGCCGCCGCCTAGACTCCATGACGTGTACAACTGGGATCTCCAGAACGCCATCGTGGCCTTCGTCGACAGCCTGCGC
CCCAGCGCGCAGCAGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSTATGGLLLVHAHPDDETITTGGTIARYRARGVPVTVVTCTLGEEGEVIGEQWAQLAADRADQLGGYRILELTRALDAL
DAGPPRFLGGAGRWRDSGMAGTPSAEHPRAFVNSGPEAVEALVEVLLDLRPRVVVGYDPNGGYGHPDHIRAHRVTTEAVR
AAAERGWDVPKFYWTVTDADMLRLHTEALARRTAAGLPGALPRGWRLPAADELACVASDTVTTTVDVAEVLAAKRAALRA
HATQITVAPSGREFALSNNIAQPVLPEEHYVLVRGRRGPAGPDGREHDLFAGLDGPAT

Sequences:

>Translated_298_residues
MSTATGGLLLVHAHPDDETITTGGTIARYRARGVPVTVVTCTLGEEGEVIGEQWAQLAADRADQLGGYRILELTRALDAL
DAGPPRFLGGAGRWRDSGMAGTPSAEHPRAFVNSGPEAVEALVEVLLDLRPRVVVGYDPNGGYGHPDHIRAHRVTTEAVR
AAAERGWDVPKFYWTVTDADMLRLHTEALARRTAAGLPGALPRGWRLPAADELACVASDTVTTTVDVAEVLAAKRAALRA
HATQITVAPSGREFALSNNIAQPVLPEEHYVLVRGRRGPAGPDGREHDLFAGLDGPAT
>Mature_297_residues
STATGGLLLVHAHPDDETITTGGTIARYRARGVPVTVVTCTLGEEGEVIGEQWAQLAADRADQLGGYRILELTRALDALD
AGPPRFLGGAGRWRDSGMAGTPSAEHPRAFVNSGPEAVEALVEVLLDLRPRVVVGYDPNGGYGHPDHIRAHRVTTEAVRA
AAERGWDVPKFYWTVTDADMLRLHTEALARRTAAGLPGALPRGWRLPAADELACVASDTVTTTVDVAEVLAAKRAALRAH
ATQITVAPSGREFALSNNIAQPVLPEEHYVLVRGRRGPAGPDGREHDLFAGLDGPAT

Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MshB deacetylase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MSHB_NOCFA (Q5YQD2)

Other databases:

- EMBL:   AP006618
- RefSeq:   YP_120973.1
- ProteinModelPortal:   Q5YQD2
- SMR:   Q5YQD2
- GeneID:   3111111
- GenomeReviews:   AP006618_GR
- KEGG:   nfa:nfa47570
- NMPDR:   fig|247156.1.peg.4575
- HOGENOM:   HBG666753
- OMA:   KFYWTVT
- ProtClustDB:   CLSK2523796
- BioCyc:   NFAR247156:NFA47570-MONOMER
- HAMAP:   MF_01696
- InterPro:   IPR003737
- InterPro:   IPR017810
- PANTHER:   PTHR12993
- TIGRFAMs:   TIGR03445

Pfam domain/function: PF02585 PIG-L

EC number: =3.5.1.103

Molecular weight: Translated: 31656; Mature: 31525

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTATGGLLLVHAHPDDETITTGGTIARYRARGVPVTVVTCTLGEEGEVIGEQWAQLAAD
CCCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHH
RADQLGGYRILELTRALDALDAGPPRFLGGAGRWRDSGMAGTPSAEHPRAFVNSGPEAVE
HHHHHCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHH
ALVEVLLDLRPRVVVGYDPNGGYGHPDHIRAHRVTTEAVRAAAERGWDVPKFYWTVTDAD
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHH
MLRLHTEALARRTAAGLPGALPRGWRLPAADELACVASDTVTTTVDVAEVLAAKRAALRA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
HATQITVAPSGREFALSNNIAQPVLPEEHYVLVRGRRGPAGPDGREHDLFAGLDGPAT
HCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
STATGGLLLVHAHPDDETITTGGTIARYRARGVPVTVVTCTLGEEGEVIGEQWAQLAAD
CCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHH
RADQLGGYRILELTRALDALDAGPPRFLGGAGRWRDSGMAGTPSAEHPRAFVNSGPEAVE
HHHHHCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHH
ALVEVLLDLRPRVVVGYDPNGGYGHPDHIRAHRVTTEAVRAAAERGWDVPKFYWTVTDAD
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHH
MLRLHTEALARRTAAGLPGALPRGWRLPAADELACVASDTVTTTVDVAEVLAAKRAALRA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
HATQITVAPSGREFALSNNIAQPVLPEEHYVLVRGRRGPAGPDGREHDLFAGLDGPAT
HCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA