Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026714

Identifier: 54026714

GI number: 54026714

Start: 4951074

End: 4951907

Strand: Reverse

Name: 54026714

Synonym: nfa47400

Alternate gene names: NA

Gene position: 4951907-4951074 (Counterclockwise)

Preceding gene: 54026715

Following gene: 54026713

Centisome position: 82.24

GC content: 68.35

Gene sequence:

>834_bases
ATGTCGATCGATGTCCCCGAGAACGAGGTAGGCGCCGAACCGCGCAACCGGGCAGCCGCCAAACCGAAGCCGACCGCCAA
GTTCCGTGGCCCGATCATGTTCCGCCGGGACCGCAAGCCCGGCGTGCGCACCGCCGACCGCAACCTGCTCGACACCAGGG
CCGACGGCGACTGGGTGCACACCGACCCCTGGCGGGTGCTGCGCATCCAGGCCGAGTTCGTGGAGGGCTTCGGCGCGCTG
GCCGAACTGCCGCACGCGGTGACCGTGTTCGGGTCGGCGCGCACCCCGGTCGACCACCCCGAGTACGAGGCCGGTTACGC
CATCGGCGCGGCGCTGGCGCGGGCCGGCTTCGCGGTGATCACCGGCGGCGGCCCGGGTGCGATGGAGGCCGCCAACCGCG
GCGCCAGCGAGGCGGGCGGCTACTCGATCGGCCTCGGCATCGAACTGCCCTTCGAGCAGAGCCTCAACGACTGGGTGGAC
CTGGGCATCAACTTCCGCTACTTCTTCGTCCGCAAGACGATGTTCGTGAAGTACTCGGAGGCATTCGTCTGCCTGCCCGG
TGGTTTCGGCACACTCGACGAACTGTTCGAGGCGCTCACCCTGGTGCAGACCGGCAAGATCACCCGGTTCCCGATCATCC
TGTTCGGCAGCTCCTACTGGGCGGGCCTGGTGGACTGGATGCGCAGTTCGCTGGAAGGTTTCGGCAAGATCTCCGCGGGC
GATCTCGATCTGCTGCACGTGACCGACCACGTCGACGACGTGGTCGACATCATCGCGCGCGCCGCCGAGCAGCGCGCCGA
ACTGGACACCTACGGAACGGAGGATCAGTGGTGA

Upstream 100 bases:

>100_bases
CGCCTACCTCACCGGCGCGGTCTGAGCGCGTCACCGAGCATCCGCTCGGCGTTCACCGCCGCGGCCGTGTGCGGTGGCAC
CGGACCGGTAGCGTGAAAGC

Downstream 100 bases:

>100_bases
CTCGGGCGCCGTTCGCGGTGTGCGTCTACTGCTCGGCCAGCACCACCGACCCCGAACAGCTCGACCTCGCGGCCCGGGTC
GGCGCCGAGATCGCCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSIDVPENEVGAEPRNRAAAKPKPTAKFRGPIMFRRDRKPGVRTADRNLLDTRADGDWVHTDPWRVLRIQAEFVEGFGAL
AELPHAVTVFGSARTPVDHPEYEAGYAIGAALARAGFAVITGGGPGAMEAANRGASEAGGYSIGLGIELPFEQSLNDWVD
LGINFRYFFVRKTMFVKYSEAFVCLPGGFGTLDELFEALTLVQTGKITRFPIILFGSSYWAGLVDWMRSSLEGFGKISAG
DLDLLHVTDHVDDVVDIIARAAEQRAELDTYGTEDQW

Sequences:

>Translated_277_residues
MSIDVPENEVGAEPRNRAAAKPKPTAKFRGPIMFRRDRKPGVRTADRNLLDTRADGDWVHTDPWRVLRIQAEFVEGFGAL
AELPHAVTVFGSARTPVDHPEYEAGYAIGAALARAGFAVITGGGPGAMEAANRGASEAGGYSIGLGIELPFEQSLNDWVD
LGINFRYFFVRKTMFVKYSEAFVCLPGGFGTLDELFEALTLVQTGKITRFPIILFGSSYWAGLVDWMRSSLEGFGKISAG
DLDLLHVTDHVDDVVDIIARAAEQRAELDTYGTEDQW
>Mature_276_residues
SIDVPENEVGAEPRNRAAAKPKPTAKFRGPIMFRRDRKPGVRTADRNLLDTRADGDWVHTDPWRVLRIQAEFVEGFGALA
ELPHAVTVFGSARTPVDHPEYEAGYAIGAALARAGFAVITGGGPGAMEAANRGASEAGGYSIGLGIELPFEQSLNDWVDL
GINFRYFFVRKTMFVKYSEAFVCLPGGFGTLDELFEALTLVQTGKITRFPIILFGSSYWAGLVDWMRSSLEGFGKISAGD
LDLLHVTDHVDDVVDIIARAAEQRAELDTYGTEDQW

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30331; Mature: 30199

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDVPENEVGAEPRNRAAAKPKPTAKFRGPIMFRRDRKPGVRTADRNLLDTRADGDWVH
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCEEE
TDPWRVLRIQAEFVEGFGALAELPHAVTVFGSARTPVDHPEYEAGYAIGAALARAGFAVI
CCCEEEEEEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEEE
TGGGPGAMEAANRGASEAGGYSIGLGIELPFEQSLNDWVDLGINFRYFFVRKTMFVKYSE
ECCCCCHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEEEEHEEEEEECC
AFVCLPGGFGTLDELFEALTLVQTGKITRFPIILFGSSYWAGLVDWMRSSLEGFGKISAG
EEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
DLDLLHVTDHVDDVVDIIARAAEQRAELDTYGTEDQW
CEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SIDVPENEVGAEPRNRAAAKPKPTAKFRGPIMFRRDRKPGVRTADRNLLDTRADGDWVH
CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCEEE
TDPWRVLRIQAEFVEGFGALAELPHAVTVFGSARTPVDHPEYEAGYAIGAALARAGFAVI
CCCEEEEEEEHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEEE
TGGGPGAMEAANRGASEAGGYSIGLGIELPFEQSLNDWVDLGINFRYFFVRKTMFVKYSE
ECCCCCHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEEEEHEEEEEECC
AFVCLPGGFGTLDELFEALTLVQTGKITRFPIILFGSSYWAGLVDWMRSSLEGFGKISAG
EEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
DLDLLHVTDHVDDVVDIIARAAEQRAELDTYGTEDQW
CEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA