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The map label for this gene is trpH [H]

Identifier: 54026685

GI number: 54026685

Start: 4923877

End: 4924758

Strand: Reverse

Name: trpH [H]

Synonym: nfa47120

Alternate gene names: 54026685

Gene position: 4924758-4923877 (Counterclockwise)

Preceding gene: 54026687

Following gene: 54026684

Centisome position: 81.79

GC content: 73.02

Gene sequence:

>882_bases
ATGATCATGCACTGTAAGACTGGATGCGTGCGCATCGACCTGCATACCCACTCGACCGCCTCCGACGGCACCGACACACC
GGCCGAACTCGTGCGCCACGCCGCCGCGGCCGGGCTCGACGTCGTGGCGATCACCGACCACGACACCACCTCCGGCTGGG
CGGAGGCCGTCGCGGCGCTGCCGCAGGGCATGACGCTGGTGCGCGGGATGGAGATGTCGTGCATCGGGCTGGGTGAGGAC
GGCTGGCCGGTGCCGGTGCACCTGCTGGCCTACCTGTTCGATCCGGCCGACCGGTCCTTCGCCGAGGAGCGGGAGCGGCT
GCGGGCCGAGCGGGTCGAGCGGCTGCGGGCGATGGCCGAACGGATGGCCGCCGACGGGCTGCCGATCGACCCGGACGCGG
TGCTGGCCTCGGCCGGTCCCTCGGCGGGCCGCCCGCATCTGGCCAGGGCGCTGGTCGCCGCGGGGGTGGTGCCTTCGGTG
GATGCCGCCTTCACCGACCTGCTCGCCCCGCACGGCCGCTACTACGCCGAGAAGGCCGACACGCCGCTGCACCGCGCGGT
GCGGATGATCGCGGCGGCGGGCGGCGTCAGCGTGCTCGCGCACACCAGGGCCCGCAAGCGCGGCCGTCTGCTGGCCCTCG
ACGACATCCGCGAACTGGCCGGGCTCGGGCTCGGCGGTCTCGAGATCGACCACCCGGACCACTCGGCCGCCGACCGCGCG
CTGCTGACCGACCTCGCCGCCGAACTGGACCTGATCACCACCGGGTCCTCGGACTACCACGGCACCAACAAGACCATCCG
GCTCGGTGAATTCACCACCGACCCCGAGCAGTTCGAGCGGTTGGTGGCGCGGGCGACGGGTGTCCCGGTGGTCGTCTCGT
GA

Upstream 100 bases:

>100_bases
ACCGGGATGCGCGGCAGCGGCGCGGGTGGGCGGCCGGGGCCACGGAACGACGGGAGGGAGGGCACGCCGACGATGCTACG
TCGGCCGGGGGTGCGGGCCG

Downstream 100 bases:

>100_bases
GACCGGTCCGCGCGCTCAGCGGGGTGGTCGCGGCGGGTACGGTGCTGCTGGCGCTGGTGGTGGTCGGGGCGTCGGTGATC
GGCGGGCAACGCGGATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIMHCKTGCVRIDLHTHSTASDGTDTPAELVRHAAAAGLDVVAITDHDTTSGWAEAVAALPQGMTLVRGMEMSCIGLGED
GWPVPVHLLAYLFDPADRSFAEERERLRAERVERLRAMAERMAADGLPIDPDAVLASAGPSAGRPHLARALVAAGVVPSV
DAAFTDLLAPHGRYYAEKADTPLHRAVRMIAAAGGVSVLAHTRARKRGRLLALDDIRELAGLGLGGLEIDHPDHSAADRA
LLTDLAAELDLITTGSSDYHGTNKTIRLGEFTTDPEQFERLVARATGVPVVVS

Sequences:

>Translated_293_residues
MIMHCKTGCVRIDLHTHSTASDGTDTPAELVRHAAAAGLDVVAITDHDTTSGWAEAVAALPQGMTLVRGMEMSCIGLGED
GWPVPVHLLAYLFDPADRSFAEERERLRAERVERLRAMAERMAADGLPIDPDAVLASAGPSAGRPHLARALVAAGVVPSV
DAAFTDLLAPHGRYYAEKADTPLHRAVRMIAAAGGVSVLAHTRARKRGRLLALDDIRELAGLGLGGLEIDHPDHSAADRA
LLTDLAAELDLITTGSSDYHGTNKTIRLGEFTTDPEQFERLVARATGVPVVVS
>Mature_293_residues
MIMHCKTGCVRIDLHTHSTASDGTDTPAELVRHAAAAGLDVVAITDHDTTSGWAEAVAALPQGMTLVRGMEMSCIGLGED
GWPVPVHLLAYLFDPADRSFAEERERLRAERVERLRAMAERMAADGLPIDPDAVLASAGPSAGRPHLARALVAAGVVPSV
DAAFTDLLAPHGRYYAEKADTPLHRAVRMIAAAGGVSVLAHTRARKRGRLLALDDIRELAGLGLGGLEIDHPDHSAADRA
LLTDLAAELDLITTGSSDYHGTNKTIRLGEFTTDPEQFERLVARATGVPVVVS

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=270, Percent_Identity=29.2592592592593, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31091; Mature: 31091

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMHCKTGCVRIDLHTHSTASDGTDTPAELVRHAAAAGLDVVAITDHDTTSGWAEAVAAL
CEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
PQGMTLVRGMEMSCIGLGEDGWPVPVHLLAYLFDPADRSFAEERERLRAERVERLRAMAE
CCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RMAADGLPIDPDAVLASAGPSAGRPHLARALVAAGVVPSVDAAFTDLLAPHGRYYAEKAD
HHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCC
TPLHRAVRMIAAAGGVSVLAHTRARKRGRLLALDDIRELAGLGLGGLEIDHPDHSAADRA
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCEECCCCCHHHHHH
LLTDLAAELDLITTGSSDYHGTNKTIRLGEFTTDPEQFERLVARATGVPVVVS
HHHHHHHHHEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEC
>Mature Secondary Structure
MIMHCKTGCVRIDLHTHSTASDGTDTPAELVRHAAAAGLDVVAITDHDTTSGWAEAVAAL
CEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
PQGMTLVRGMEMSCIGLGEDGWPVPVHLLAYLFDPADRSFAEERERLRAERVERLRAMAE
CCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RMAADGLPIDPDAVLASAGPSAGRPHLARALVAAGVVPSVDAAFTDLLAPHGRYYAEKAD
HHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCC
TPLHRAVRMIAAAGGVSVLAHTRARKRGRLLALDDIRELAGLGLGGLEIDHPDHSAADRA
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCEECCCCCHHHHHH
LLTDLAAELDLITTGSSDYHGTNKTIRLGEFTTDPEQFERLVARATGVPVVVS
HHHHHHHHHEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]