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The map label for this gene is 54026683

Identifier: 54026683

GI number: 54026683

Start: 4921935

End: 4923599

Strand: Reverse

Name: 54026683

Synonym: nfa47100

Alternate gene names: NA

Gene position: 4923599-4921935 (Counterclockwise)

Preceding gene: 54026684

Following gene: 54026682

Centisome position: 81.77

GC content: 78.2

Gene sequence:

>1665_bases
TTGCGGCCCGGTGAATTGTGGCCGAACATTTCGATCATGACCGATATCGAGACGGACGTGCTGGTCCTGGGCGGTGGCCC
CGCCGGGATCTGGGCGGCCCTCTCGGCGGCGGCGAGCGGTGCCGCGGTGGTGCTCGTCGACAAGGCGTGGTGCGCGGGCA
GCGGTCCCGCTGCCGAGGGCGTGCACACGCTGTGGAACCTGCCGCCCGGTCCCGGACGCGAGGAGGCGGTGCGGCGCACC
CTGCTGCACGGCGGCGGCCTCGGCGATCCCACCTGGATGCATCGCGTGCTCGACGAAACATACCGTCGGACAACGGAATT
GACCCGGTGGGGATACCGGGTGCCCGGCGCGCGGCGTTCCGCGACGCCCGCCCTCGCATACCTGGACGGCGCCCGCCATC
TGCGGTTGCTGCGGCGCACGCTGCGGCTGCTCGGCGTGCGGGTGCTCGACCGTCATCCGGCCCTGCACCTGCTGACCGAC
CGCGACGGCGTGGTCGCCGGCGCGGCGGGCGTGCGCACCGGCGACCGGTGCCTGCCGTGGACCGCCCGCGCGGGGGCGGT
CGTCCTGGCCACCGGCGGCTGCGCGTTCGGCTCCGGCGCGGCGGGCACCGCGGGCGCCACCGGTGAGGGGCTGCTGATGG
CGGCCGAGGCGGGGGCGCGGCTGTCGGGCATGGAATTCTCCTGCGGCTACGGCCTGGCCGTGGCCGCGCATCCGGCCGGG
CCGGTGCTGCGGTCGGCGCGGGCGCTGCAACCGGCGTTGCGGTCGGCCACCCTGGTGGACGAGGACGGCGCGCCGCTCGC
GGGGCACCGGTCCGCGGCGCTGGCCGCCCTGGCCGACGGCAGGCGGGTCTACGCGCTGCCCGCCGGGCTGCTCGTCGCCA
CCCGCGCACGGCTCGAACGCCTCGGCCTCATCGACGCGGCGGGCCGGGTGCCGGTGCGCGCGGTGTTGGAGGGCACCGTG
CGCGGTACCGGTGGCCTGCGCCTCACCGGCGCCGACTGCGCGACCACCGTGGCGGGGCTGTACGCCGCGGGCGACGTCGC
CGACCGGGAACAGATCAGCGGCGCGGCGAGCGGATCGGGTGGCCACCACGCCGCCTGGGCGATCGCCTCCGGCGCGTGGG
CGGGCGCGGCGGCGGCCGGATACGCGCGCCGCCGCGGCATCCCCGCCGCGGCGTTCCCCGTGCCCGGCGCCGGGCTGGCC
ACCCGGGCGAACCTGGACCCGCGCGCCGTGGTCGGCCTGGTGCAGGAGCACACGCTGCCCCTGCGGCGCAGCTATCTGCG
CAGCGCCGACAGCCTGCGCGACAGCATCGCCGAACTCGACGCGCTGTGGCCGGGCGCCCGCTTCGAACTCGGCGGGTACG
GGCACGGACGGGTCAGCGCCCGCGAGGCCGCCGCGCTGCTGGCCGTCGCGCGCTGGGCCGACCACGCCGCGCTCGCGCGC
ACCGAGAGCCGGGGTATGCACCGCAGGGCCGATCATCCGGGCGCCGCGCCGGACTGGCGGGTCCGGCTGCTGGTCGGCGG
ACTCGACGAGATCCGGGTCGAGCGCGAGCGCCCGCCCGCCGCGCGCGAGACCGGTCGCGGCCGGGGCAGCACCACCCCGC
GTTCGGCGCGCGTGCGCGGGTCGAGCGGCCCCGGCCTCACGCCCGGCGGCGCGGTGCCGTTGTGA

Upstream 100 bases:

>100_bases
GAACCACCGGCGTGCGTGCCTTTTTCGCGAGCACGATCGTTTTCGCGGTCGCGGCAATATTGCTGTGGACACAGTGGTGG
AGTTGACAGTTCGATAATGG

Downstream 100 bases:

>100_bases
CAGCTCACCGGTGCGCCTGCGGCGCCGGCGAGTTTCCCCTAACCCGGAGGTAATTCCGCGGTTCTAGGCTCGGAGCATGG
CGAGCAACCGGGATCCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: Oxidoreductase Protein; FAD Dependent Oxidoreductase; Oxidoreductase; Fumarate/Succinate Reductase Flavoprotein Subunit; Glucose-Inhibited Division Protein A

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MRPGELWPNISIMTDIETDVLVLGGGPAGIWAALSAAASGAAVVLVDKAWCAGSGPAAEGVHTLWNLPPGPGREEAVRRT
LLHGGGLGDPTWMHRVLDETYRRTTELTRWGYRVPGARRSATPALAYLDGARHLRLLRRTLRLLGVRVLDRHPALHLLTD
RDGVVAGAAGVRTGDRCLPWTARAGAVVLATGGCAFGSGAAGTAGATGEGLLMAAEAGARLSGMEFSCGYGLAVAAHPAG
PVLRSARALQPALRSATLVDEDGAPLAGHRSAALAALADGRRVYALPAGLLVATRARLERLGLIDAAGRVPVRAVLEGTV
RGTGGLRLTGADCATTVAGLYAAGDVADREQISGAASGSGGHHAAWAIASGAWAGAAAAGYARRRGIPAAAFPVPGAGLA
TRANLDPRAVVGLVQEHTLPLRRSYLRSADSLRDSIAELDALWPGARFELGGYGHGRVSAREAAALLAVARWADHAALAR
TESRGMHRRADHPGAAPDWRVRLLVGGLDEIRVERERPPAARETGRGRGSTTPRSARVRGSSGPGLTPGGAVPL

Sequences:

>Translated_554_residues
MRPGELWPNISIMTDIETDVLVLGGGPAGIWAALSAAASGAAVVLVDKAWCAGSGPAAEGVHTLWNLPPGPGREEAVRRT
LLHGGGLGDPTWMHRVLDETYRRTTELTRWGYRVPGARRSATPALAYLDGARHLRLLRRTLRLLGVRVLDRHPALHLLTD
RDGVVAGAAGVRTGDRCLPWTARAGAVVLATGGCAFGSGAAGTAGATGEGLLMAAEAGARLSGMEFSCGYGLAVAAHPAG
PVLRSARALQPALRSATLVDEDGAPLAGHRSAALAALADGRRVYALPAGLLVATRARLERLGLIDAAGRVPVRAVLEGTV
RGTGGLRLTGADCATTVAGLYAAGDVADREQISGAASGSGGHHAAWAIASGAWAGAAAAGYARRRGIPAAAFPVPGAGLA
TRANLDPRAVVGLVQEHTLPLRRSYLRSADSLRDSIAELDALWPGARFELGGYGHGRVSAREAAALLAVARWADHAALAR
TESRGMHRRADHPGAAPDWRVRLLVGGLDEIRVERERPPAARETGRGRGSTTPRSARVRGSSGPGLTPGGAVPL
>Mature_554_residues
MRPGELWPNISIMTDIETDVLVLGGGPAGIWAALSAAASGAAVVLVDKAWCAGSGPAAEGVHTLWNLPPGPGREEAVRRT
LLHGGGLGDPTWMHRVLDETYRRTTELTRWGYRVPGARRSATPALAYLDGARHLRLLRRTLRLLGVRVLDRHPALHLLTD
RDGVVAGAAGVRTGDRCLPWTARAGAVVLATGGCAFGSGAAGTAGATGEGLLMAAEAGARLSGMEFSCGYGLAVAAHPAG
PVLRSARALQPALRSATLVDEDGAPLAGHRSAALAALADGRRVYALPAGLLVATRARLERLGLIDAAGRVPVRAVLEGTV
RGTGGLRLTGADCATTVAGLYAAGDVADREQISGAASGSGGHHAAWAIASGAWAGAAAAGYARRRGIPAAAFPVPGAGLA
TRANLDPRAVVGLVQEHTLPLRRSYLRSADSLRDSIAELDALWPGARFELGGYGHGRVSAREAAALLAVARWADHAALAR
TESRGMHRRADHPGAAPDWRVRLLVGGLDEIRVERERPPAARETGRGRGSTTPRSARVRGSSGPGLTPGGAVPL

Specific function: Unknown

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57040; Mature: 57040

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPGELWPNISIMTDIETDVLVLGGGPAGIWAALSAAASGAAVVLVDKAWCAGSGPAAEG
CCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
VHTLWNLPPGPGREEAVRRTLLHGGGLGDPTWMHRVLDETYRRTTELTRWGYRVPGARRS
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ATPALAYLDGARHLRLLRRTLRLLGVRVLDRHPALHLLTDRDGVVAGAAGVRTGDRCLPW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCCCCCCC
TARAGAVVLATGGCAFGSGAAGTAGATGEGLLMAAEAGARLSGMEFSCGYGLAVAAHPAG
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCEEEEECCCC
PVLRSARALQPALRSATLVDEDGAPLAGHRSAALAALADGRRVYALPAGLLVATRARLER
HHHHHHHHHHHHHHHCEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHH
LGLIDAAGRVPVRAVLEGTVRGTGGLRLTGADCATTVAGLYAAGDVADREQISGAASGSG
HCCCCCCCCCCHHHHHHCCEECCCCEEEECCHHHHHHHHHHHCCCCCCHHHHCCCCCCCC
GHHAAWAIASGAWAGAAAAGYARRRGIPAAAFPVPGAGLATRANLDPRAVVGLVQEHTLP
CCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCHH
LRRSYLRSADSLRDSIAELDALWPGARFELGGYGHGRVSAREAAALLAVARWADHAALAR
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TESRGMHRRADHPGAAPDWRVRLLVGGLDEIRVERERPPAARETGRGRGSTTPRSARVRG
HHHCCCHHCCCCCCCCCCCEEEEEECCHHHHHEECCCCCCHHHCCCCCCCCCCCCEEEEC
SSGPGLTPGGAVPL
CCCCCCCCCCCCCC
>Mature Secondary Structure
MRPGELWPNISIMTDIETDVLVLGGGPAGIWAALSAAASGAAVVLVDKAWCAGSGPAAEG
CCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
VHTLWNLPPGPGREEAVRRTLLHGGGLGDPTWMHRVLDETYRRTTELTRWGYRVPGARRS
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ATPALAYLDGARHLRLLRRTLRLLGVRVLDRHPALHLLTDRDGVVAGAAGVRTGDRCLPW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCCCCCCC
TARAGAVVLATGGCAFGSGAAGTAGATGEGLLMAAEAGARLSGMEFSCGYGLAVAAHPAG
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCEEEEECCCC
PVLRSARALQPALRSATLVDEDGAPLAGHRSAALAALADGRRVYALPAGLLVATRARLER
HHHHHHHHHHHHHHHCEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHH
LGLIDAAGRVPVRAVLEGTVRGTGGLRLTGADCATTVAGLYAAGDVADREQISGAASGSG
HCCCCCCCCCCHHHHHHCCEECCCCEEEECCHHHHHHHHHHHCCCCCCHHHHCCCCCCCC
GHHAAWAIASGAWAGAAAAGYARRRGIPAAAFPVPGAGLATRANLDPRAVVGLVQEHTLP
CCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCHH
LRRSYLRSADSLRDSIAELDALWPGARFELGGYGHGRVSAREAAALLAVARWADHAALAR
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TESRGMHRRADHPGAAPDWRVRLLVGGLDEIRVERERPPAARETGRGRGSTTPRSARVRG
HHHCCCHHCCCCCCCCCCCEEEEEECCHHHHHEECCCCCCHHHCCCCCCCCCCCCEEEEC
SSGPGLTPGGAVPL
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA