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The map label for this gene is 54026673

Identifier: 54026673

GI number: 54026673

Start: 4909069

End: 4909713

Strand: Reverse

Name: 54026673

Synonym: nfa47000

Alternate gene names: NA

Gene position: 4909713-4909069 (Counterclockwise)

Preceding gene: 54026679

Following gene: 54026669

Centisome position: 81.54

GC content: 68.06

Gene sequence:

>645_bases
ATGAGTACCGTGAAGAGCAGCAGCCCCGGTGGAACCGCGAAACGAACCCGGCTCAGCCCCGAGGAGCGCCGCAAGCAGTT
GATCGCGCTCGGGGCGCGGATGCTCGGCGAGCGCGCCATCGAGGACATCTCCGTCAGCGAGATCGCCGCCGAGGCGGGCA
TCTCACGCGGCCTGCTGTTCCACTACTTCCCGACCAAACAGGACTTCCAGCTCGCCATCGTCCGCCACGCCAACGCCGAA
CTGCTCGAGCGCGTGACCCCCGACCGGACGCTCGGCATCACCGACATGGTGCGCGACTCCATCGAGCGCTACGTCGACTA
CGTCAGCCAAAACCGCACCTCGTACCTGGCACTGCTGCGCGGACCCACCAGCGTCAACCCCGACCTCGGCCCGCTGGTCG
AATCCACCCGCGACGCCATCGTCCAGCTCATCCTCACCGAGGCCCCGATCGAGGTCGCCGAGACCGACCGCCCCCGCCTG
CTGCTCGGCATGCGCGGCTGGATCGCCTTCGTCGAGGAGACCACCCTCACCTGGCTGCGCACCGAACCCATTCCCCGCGA
ACAACTCATCGACCTGCTCGTCGACTCCCTGCTCAACCTCGCCGCAGCCCTCGAACCACAACTGGCGGCGGCGCTGCGCT
CCTGA

Upstream 100 bases:

>100_bases
GCCGGTCGCCGACAGCATTGTCTGTAACCTTGCGACTCATGTAACCCAGATTACGGCGCTATTGAGCAGGAGTCAACAGT
ATTGAACGACGTTCAGTAAC

Downstream 100 bases:

>100_bases
CGCTCAGTGCAGGTGGGCGGCCAGGTGCGGGACGGCTTCGGCCGGGTGTTCGGCGTCGATCGCGGCGGCGATTTCGCGGT
AGGCCCAACCGGTTTCGGTG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Tetr Family Transcriptional Regulator; TetR-Family Transcriptional Regulatory Protein; Transcriptional Regulator TetR-Family

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSTVKSSSPGGTAKRTRLSPEERRKQLIALGARMLGERAIEDISVSEIAAEAGISRGLLFHYFPTKQDFQLAIVRHANAE
LLERVTPDRTLGITDMVRDSIERYVDYVSQNRTSYLALLRGPTSVNPDLGPLVESTRDAIVQLILTEAPIEVAETDRPRL
LLGMRGWIAFVEETTLTWLRTEPIPREQLIDLLVDSLLNLAAALEPQLAAALRS

Sequences:

>Translated_214_residues
MSTVKSSSPGGTAKRTRLSPEERRKQLIALGARMLGERAIEDISVSEIAAEAGISRGLLFHYFPTKQDFQLAIVRHANAE
LLERVTPDRTLGITDMVRDSIERYVDYVSQNRTSYLALLRGPTSVNPDLGPLVESTRDAIVQLILTEAPIEVAETDRPRL
LLGMRGWIAFVEETTLTWLRTEPIPREQLIDLLVDSLLNLAAALEPQLAAALRS
>Mature_213_residues
STVKSSSPGGTAKRTRLSPEERRKQLIALGARMLGERAIEDISVSEIAAEAGISRGLLFHYFPTKQDFQLAIVRHANAEL
LERVTPDRTLGITDMVRDSIERYVDYVSQNRTSYLALLRGPTSVNPDLGPLVESTRDAIVQLILTEAPIEVAETDRPRLL
LGMRGWIAFVEETTLTWLRTEPIPREQLIDLLVDSLLNLAAALEPQLAAALRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23758; Mature: 23626

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVKSSSPGGTAKRTRLSPEERRKQLIALGARMLGERAIEDISVSEIAAEAGISRGLLF
CCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
HYFPTKQDFQLAIVRHANAELLERVTPDRTLGITDMVRDSIERYVDYVSQNRTSYLALLR
EECCCCCCCEEEEEHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEE
GPTSVNPDLGPLVESTRDAIVQLILTEAPIEVAETDRPRLLLGMRGWIAFVEETTLTWLR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHEEE
TEPIPREQLIDLLVDSLLNLAAALEPQLAAALRS
CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
>Mature Secondary Structure 
STVKSSSPGGTAKRTRLSPEERRKQLIALGARMLGERAIEDISVSEIAAEAGISRGLLF
CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
HYFPTKQDFQLAIVRHANAELLERVTPDRTLGITDMVRDSIERYVDYVSQNRTSYLALLR
EECCCCCCCEEEEEHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEE
GPTSVNPDLGPLVESTRDAIVQLILTEAPIEVAETDRPRLLLGMRGWIAFVEETTLTWLR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHEEE
TEPIPREQLIDLLVDSLLNLAAALEPQLAAALRS
CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA