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The map label for this gene is yoqW [H]

Identifier: 54026560

GI number: 54026560

Start: 4768841

End: 4769638

Strand: Reverse

Name: yoqW [H]

Synonym: nfa45870

Alternate gene names: 54026560

Gene position: 4769638-4768841 (Counterclockwise)

Preceding gene: 54026566

Following gene: 54026557

Centisome position: 79.21

GC content: 71.68

Gene sequence:

>798_bases
ATGTGCGGACGATATGCGACCACGACGAACCCGGCCCGGCTCGCGGTCGAACTGGACGCGATCGACGAGACCGGCGGCGA
CGGAGCCACGCCGACAGGCGATTTCGCCACCTACAACGTCGCGCCGACGAACCGGGTGCTGACCATCGTGTCCCGGCACG
ACCGCGAGCACCCCGACGACGACCCGACCCTGCGGATCCGGCGGATGCGCTGGGGCCTGATCCCGGCGTGGACGAAGGCG
GCCGAGCCCGGCGTGCCCGCGAAGGGCAAACCGCTGTTCAACGCGCGCGCCGACAAGGCGGCGAGCACGCCGTCGTTCCG
CGACGCGGTGAAGTACCGGCGCTGCCTGGTCCCGATGGACGGCTGGTACGAGTGGCTGGTCGAGCCGGACCCGGCGGGCG
GGAAGAAGGTCGTCAAGCGCCCCTACTTCATGACCGACGCCAACGGCGGGCGGCTGTACATGGCGGGCCTGTGGTCGGTG
TGGCGCGATCGCGCGCAGCCTGCGAGCGAGCCGCTGCTGTCGTGCACCATCCTCACCACCGACGCGGTCGGCGACCTCGC
CCGCATCCACGACCGGATGCCGCTGCCGATGCCGCGCGCGCACTGGGACGCCTGGCTCGACCCCGATCACCCCGCCCCCG
CCGAACTGCTGGCGACGCCGGGGGAGGACGTCGTGCGCGACATCGTCGCGCGGCCGGTGTCGCCGCTGGTGAACAACGTG
AAGAACAACGGACCCGAACTGCTGGCACCGATCGACGAGCCCGCGGCGGAACCGGCCGGGCAGATCAGCCTGTTGTGA

Upstream 100 bases:

>100_bases
CCATCCGTTGAGAGAATGCTAAGGCAAAACTCTCACCAGGTCACCCACTATCCCTCCATTGTCCTCGCGGCTGTCGGTGG
GAGGTGCCACTATCGGAAAT

Downstream 100 bases:

>100_bases
CCGCCCGGCCGGGTGCGGCTACAGCGGGCAGGGCACCGATTCGGTGGCGAGATTGAGTCCGCACTTGACCACGCCGGTCA
CCAGGTCGATCACCTCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MCGRYATTTNPARLAVELDAIDETGGDGATPTGDFATYNVAPTNRVLTIVSRHDREHPDDDPTLRIRRMRWGLIPAWTKA
AEPGVPAKGKPLFNARADKAASTPSFRDAVKYRRCLVPMDGWYEWLVEPDPAGGKKVVKRPYFMTDANGGRLYMAGLWSV
WRDRAQPASEPLLSCTILTTDAVGDLARIHDRMPLPMPRAHWDAWLDPDHPAPAELLATPGEDVVRDIVARPVSPLVNNV
KNNGPELLAPIDEPAAEPAGQISLL

Sequences:

>Translated_265_residues
MCGRYATTTNPARLAVELDAIDETGGDGATPTGDFATYNVAPTNRVLTIVSRHDREHPDDDPTLRIRRMRWGLIPAWTKA
AEPGVPAKGKPLFNARADKAASTPSFRDAVKYRRCLVPMDGWYEWLVEPDPAGGKKVVKRPYFMTDANGGRLYMAGLWSV
WRDRAQPASEPLLSCTILTTDAVGDLARIHDRMPLPMPRAHWDAWLDPDHPAPAELLATPGEDVVRDIVARPVSPLVNNV
KNNGPELLAPIDEPAAEPAGQISLL
>Mature_265_residues
MCGRYATTTNPARLAVELDAIDETGGDGATPTGDFATYNVAPTNRVLTIVSRHDREHPDDDPTLRIRRMRWGLIPAWTKA
AEPGVPAKGKPLFNARADKAASTPSFRDAVKYRRCLVPMDGWYEWLVEPDPAGGKKVVKRPYFMTDANGGRLYMAGLWSV
WRDRAQPASEPLLSCTILTTDAVGDLARIHDRMPLPMPRAHWDAWLDPDHPAPAELLATPGEDVVRDIVARPVSPLVNNV
KNNGPELLAPIDEPAAEPAGQISLL

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=247, Percent_Identity=31.5789473684211, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI54607104, Length=247, Percent_Identity=31.5789473684211, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI48994894, Length=253, Percent_Identity=31.6205533596838, Blast_Score=92, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6323761, Length=222, Percent_Identity=30.6306306306306, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21355761, Length=306, Percent_Identity=27.4509803921569, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 29068; Mature: 29068

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRYATTTNPARLAVELDAIDETGGDGATPTGDFATYNVAPTNRVLTIVSRHDREHPDD
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCC
DPTLRIRRMRWGLIPAWTKAAEPGVPAKGKPLFNARADKAASTPSFRDAVKYRRCLVPMD
CHHEEEEHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
GWYEWLVEPDPAGGKKVVKRPYFMTDANGGRLYMAGLWSVWRDRAQPASEPLLSCTILTT
CHHHEEECCCCCCCHHHHHCCCEEEECCCCEEEEHHHHHHHHHHCCCCCCCCEEEEEEEC
DAVGDLARIHDRMPLPMPRAHWDAWLDPDHPAPAELLATPGEDVVRDIVARPVSPLVNNV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCHHHHHHHH
KNNGPELLAPIDEPAAEPAGQISLL
HCCCCEEEECCCCCCCCCCCCEECC
>Mature Secondary Structure
MCGRYATTTNPARLAVELDAIDETGGDGATPTGDFATYNVAPTNRVLTIVSRHDREHPDD
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCC
DPTLRIRRMRWGLIPAWTKAAEPGVPAKGKPLFNARADKAASTPSFRDAVKYRRCLVPMD
CHHEEEEHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
GWYEWLVEPDPAGGKKVVKRPYFMTDANGGRLYMAGLWSVWRDRAQPASEPLLSCTILTT
CHHHEEECCCCCCCHHHHHCCCEEEECCCCEEEEHHHHHHHHHHCCCCCCCCEEEEEEEC
DAVGDLARIHDRMPLPMPRAHWDAWLDPDHPAPAELLATPGEDVVRDIVARPVSPLVNNV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCHHHHHHHH
KNNGPELLAPIDEPAAEPAGQISLL
HCCCCEEEECCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]