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The map label for this gene is 54026449

Identifier: 54026449

GI number: 54026449

Start: 4640531

End: 4641136

Strand: Reverse

Name: 54026449

Synonym: nfa44760

Alternate gene names: NA

Gene position: 4641136-4640531 (Counterclockwise)

Preceding gene: 54026453

Following gene: 54026447

Centisome position: 77.08

GC content: 74.26

Gene sequence:

>606_bases
ATGGACATTCGCGCCGACCTCCTCGCCGAGCGGGCGGGGGGCATTGCCGAGCGGGCGGACGCGGCGCGCAACCGGGCCAG
GATTCTCGCCGCCGCCGCCGACCTGTTCGCCACTCGCGACCCGCGCGGCGTCACCATGGACGACATCGCCAAAGCGGCAG
GCGTCGGCCGCGGCACGCTCTACCGCCGCTATCCCGACACCGGGGCCATCGCGGTCGCTCTGCTGGATCGGCACGAACGC
GCCCTGCAGGAACAGTTGCTGCACGGCGAGCCGCCGCTGGGCCCCGGCGCGGCACCCGCCGACCGGCTGGCCGCGTTCTA
TCGGGCGATGGTCGATCTGCTCGACGCGCACGCGGCGCTCGCGCTGGGCGCCGAGAGCGGCGGCGCGCGTTTCCGCACCG
GCGCGTACGGGTTCTGGTCGGCCCACGTGCGGGTGTTGTTGACCGAAGCCGGCGTGCCGCAGCCGGATTCACTCGTCGAC
GTGTTGCTGGCCCCGCTCGCCGCGGAGGTCTACCTGCATCAGCGTGAGCGCGGGCTGGCCTCGGAGCAGATCGCCGCGGC
GTTGACCGCGCTCGCGCACGGCGTACTCGGCCCGGCGTCGGAGTGA

Upstream 100 bases:

>100_bases
GGAGGAACCTCTCGATTAAGTGGACATTGCGTCCGTTTAGAGCGTAGAGCTCAACCGGACACGTCGTCCACTTATTCCCG
GGTTCGGCTACAGTGCGGAC

Downstream 100 bases:

>100_bases
AATCCCGCGCTCAGCCGTGCTGCGGGCGCACCGTCAGGATCTGCTCGGCTCGCCCGACCGGACCGTGGATGTCGTGCAAC
ACCGTGCTGGTCAGCCCTTG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MDIRADLLAERAGGIAERADAARNRARILAAAADLFATRDPRGVTMDDIAKAAGVGRGTLYRRYPDTGAIAVALLDRHER
ALQEQLLHGEPPLGPGAAPADRLAAFYRAMVDLLDAHAALALGAESGGARFRTGAYGFWSAHVRVLLTEAGVPQPDSLVD
VLLAPLAAEVYLHQRERGLASEQIAAALTALAHGVLGPASE

Sequences:

>Translated_201_residues
MDIRADLLAERAGGIAERADAARNRARILAAAADLFATRDPRGVTMDDIAKAAGVGRGTLYRRYPDTGAIAVALLDRHER
ALQEQLLHGEPPLGPGAAPADRLAAFYRAMVDLLDAHAALALGAESGGARFRTGAYGFWSAHVRVLLTEAGVPQPDSLVD
VLLAPLAAEVYLHQRERGLASEQIAAALTALAHGVLGPASE
>Mature_201_residues
MDIRADLLAERAGGIAERADAARNRARILAAAADLFATRDPRGVTMDDIAKAAGVGRGTLYRRYPDTGAIAVALLDRHER
ALQEQLLHGEPPLGPGAAPADRLAAFYRAMVDLLDAHAALALGAESGGARFRTGAYGFWSAHVRVLLTEAGVPQPDSLVD
VLLAPLAAEVYLHQRERGLASEQIAAALTALAHGVLGPASE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21085; Mature: 21085

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRADLLAERAGGIAERADAARNRARILAAAADLFATRDPRGVTMDDIAKAAGVGRGTL
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCE
YRRYPDTGAIAVALLDRHERALQEQLLHGEPPLGPGAAPADRLAAFYRAMVDLLDAHAAL
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALGAESGGARFRTGAYGFWSAHVRVLLTEAGVPQPDSLVDVLLAPLAAEVYLHQRERGLA
HCCCCCCCCEECCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
SEQIAAALTALAHGVLGPASE
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDIRADLLAERAGGIAERADAARNRARILAAAADLFATRDPRGVTMDDIAKAAGVGRGTL
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCE
YRRYPDTGAIAVALLDRHERALQEQLLHGEPPLGPGAAPADRLAAFYRAMVDLLDAHAAL
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALGAESGGARFRTGAYGFWSAHVRVLLTEAGVPQPDSLVDVLLAPLAAEVYLHQRERGLA
HCCCCCCCCEECCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
SEQIAAALTALAHGVLGPASE
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA