| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
Click here to switch to the map view.
The map label for this gene is 54026438
Identifier: 54026438
GI number: 54026438
Start: 4631692
End: 4631988
Strand: Reverse
Name: 54026438
Synonym: nfa44650
Alternate gene names: NA
Gene position: 4631988-4631692 (Counterclockwise)
Preceding gene: 54026439
Following gene: 54026435
Centisome position: 76.93
GC content: 67.34
Gene sequence:
>297_bases GTGAGCACGGTTCTCTCTGCGGCACAAGACTTCTACGGCACGGTTCTGGCCCAGGTCGGCAACCCGACCCCCGAGGCGCC GCCGATGTCGGACAAGATCCTGCAGATGACCCGCTATTTCACCTGGTTCGTGCTGCTCTCGGGCATCGCGGCCATCACCT TCGCCGGTGGCCGCTTCGCGTGGGAGAAGTGGAGCGGCGGCGCGTTGCAGTCACCGAAGATGGTGGCGGGCGCGATGCTC GGCGGTGCGGTCGCCACCAGCGCGGGCACCATCATGAACGCGGTCATGGGCGGCTGA
Upstream 100 bases:
>100_bases GCGACATCTCGGCACGTTGACATCCCAGCACGTTGACATCCCAGCACGTTCTCGAACACGACGTATTCGGAGCACGCTGA CATCGAAGAGGGGTACGGCT
Downstream 100 bases:
>100_bases ACCCGCCCGCGCGATCCGTCAGCCCAGATCGGCCGGGTCGGTGTTGGCCCCGCACAACACGACACAGACGCGTTCGCCCG GCGCCGGCCGGTAGGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSTVLSAAQDFYGTVLAQVGNPTPEAPPMSDKILQMTRYFTWFVLLSGIAAITFAGGRFAWEKWSGGALQSPKMVAGAML GGAVATSAGTIMNAVMGG
Sequences:
>Translated_98_residues MSTVLSAAQDFYGTVLAQVGNPTPEAPPMSDKILQMTRYFTWFVLLSGIAAITFAGGRFAWEKWSGGALQSPKMVAGAML GGAVATSAGTIMNAVMGG >Mature_97_residues STVLSAAQDFYGTVLAQVGNPTPEAPPMSDKILQMTRYFTWFVLLSGIAAITFAGGRFAWEKWSGGALQSPKMVAGAMLG GAVATSAGTIMNAVMGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10134; Mature: 10003
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVLSAAQDFYGTVLAQVGNPTPEAPPMSDKILQMTRYFTWFVLLSGIAAITFAGGRFA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE WEKWSGGALQSPKMVAGAMLGGAVATSAGTIMNAVMGG ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STVLSAAQDFYGTVLAQVGNPTPEAPPMSDKILQMTRYFTWFVLLSGIAAITFAGGRFA CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE WEKWSGGALQSPKMVAGAMLGGAVATSAGTIMNAVMGG ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA