| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is celB [H]
Identifier: 54026426
GI number: 54026426
Start: 4621778
End: 4623466
Strand: Reverse
Name: celB [H]
Synonym: nfa44530
Alternate gene names: 54026426
Gene position: 4623466-4621778 (Counterclockwise)
Preceding gene: 54026427
Following gene: 54026425
Centisome position: 76.79
GC content: 70.04
Gene sequence:
>1689_bases ATGATCCTGATGACGAGCCGGGCGCAGCCGACCTGGAAGGGAGACCCGAGCATGGCCCACGATCGAGCCGGGCGTCCCGC GCGCGCGAGCGACCTGGACGACATCGCGCACCTGGTGACCGCCTACTTCAGCCGCGTGCCCGATCCGCGGGATCCGGCAC AGCGAGTGGTGTTCGGCACCTCGGGACACCGCGGGTCCAGCCTGGACTGCGCGTTCAACGAAGCCCACATCCTCGCCATC ACCCAGGCGATCGTGGAATACCGTGCCACGCGCGGCATCACGGGCCCGGTCTACCTGGCCCGCGACACCCACGCGCTGTC CGAGCCCGCCTGGACCACCGCCCTCGAGGTGCTGGCCGGCAACGGCGTCACCGCCATGATCGACGCCCGCGACCGCTACA CCCCCACCCCGGCGCTGAGCCACGCCGTGCTGCGGCACAACCGCGGCGGCACCAAGCACCAGGCCGACGGCATCGTGGTG ACCCCCTCACACAACCCGCCCCGCGACGGCGGCTTCAAATACAACCCCCCGCACGGTGGTCCGGCCGACACCGGCGTCAC CGACGCCATCGCCGCCCGCGCCAACGAACTGCTGGCCGACGGGCTGACAGGGGTGCGTCGCGCCACCTACCAGCAGGCGC TGGCCACCGGCGTCGAACGCTACGACTACCTCGACCACTACATCGCCGACCTGCCGAATGTGCTGAACCTGGACGCGATT CGCGGCGCGGGCATCCGGCTCGGCGCCGACCCGATGGGCGGCGCCAGCGTCGACTACTGGGAGGAGATCGGCCAGCGCTA CGACCTCGAGCTCGAGGTCGTCAACCCGTTCGTCGACCCCACCTGGCGTTTCATGACCCTCGACAGCGACGGCAAGATCC GCATGGATCCCTCCTCCCGCTACGCCATGGCCGGGCTCGTCGCGATCAAGGACGACTACGACATCTCCACCGGCAACGAC GCCGACGCCGACCGGCACGGCATCGTCACCCCCGACGGTGGCCTGATGAACCCCAACCACTTCCTGGCCGTCGCCATCGA ATACCTGGTCGCCAACCGGATGGGCTGGGACGCGCTGACCAAGATCGGCAAGACCGTCGTCACCTCGTCGATGGTGGACC GGGTGGTGAGCGTGCTCGGCCGCCAGGTGCACGAGGTGCCGGTCGGCTTCAAATGGTTCGTGCCCGGATTGTTCAGCGGC AGTCTCGCTTTCGGCGGCGAGGAGAGCGCGGGCGCGTCGTTCCTGCGCATGGACGGCACCGTGTGGACCACCGACAAGGA CGGCATCCTGCTGGCCCTGCTGGCCGCCGAGATCGCCGCCGTCACCGGCCAGACCCCCTCGGCCCGCTACGGCGAACTCG AGCGCCGGTACGGCAGCCCCGCCTACGCCCGCATCGACGCACCGGCCGGCGCGGAACAGAAGAAGCTGCTTTCGCAGTTG ACACCGGACATGATCACCAGCGAAGAGATCGCCGGCGAGCCGATCACCGCCGTGCTCACCCGCGCCCCCGGCAACGGCGC GCCCCTGGGCGGGTTGAAGGTGACCACCGAGAACGCCTGGTTCGCGGCCCGGCCCTCCGGCACCGAGGACAAGTACAAGA TCTACGCCGAGTCGTTCCAGGGCCCCGAGCACCTCGCCCAGGTCCAGGCCGCCGCCGAGGAGATGGTGGGCAAGGCGCTC CAGCCGTGA
Upstream 100 bases:
>100_bases ACGGCGCCTACGGATACGCGCTGGGCAACGTCGTGATCAGCGTGGCGGCCAGTGTGGGCGCGGTGTACGCCGCCGTGTCC CTGACGAACTGGGTGACGCC
Downstream 100 bases:
>100_bases GCGGCTGTACCAGGTCGGGCAGCCGCGGGCTGCCCGGCGAGATCAAGGTACTGGTCGGCGCGGCGTTCGTCATCGCGCTC GGCTTCGGCCTCGTCGCGCC
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MILMTSRAQPTWKGDPSMAHDRAGRPARASDLDDIAHLVTAYFSRVPDPRDPAQRVVFGTSGHRGSSLDCAFNEAHILAI TQAIVEYRATRGITGPVYLARDTHALSEPAWTTALEVLAGNGVTAMIDARDRYTPTPALSHAVLRHNRGGTKHQADGIVV TPSHNPPRDGGFKYNPPHGGPADTGVTDAIAARANELLADGLTGVRRATYQQALATGVERYDYLDHYIADLPNVLNLDAI RGAGIRLGADPMGGASVDYWEEIGQRYDLELEVVNPFVDPTWRFMTLDSDGKIRMDPSSRYAMAGLVAIKDDYDISTGND ADADRHGIVTPDGGLMNPNHFLAVAIEYLVANRMGWDALTKIGKTVVTSSMVDRVVSVLGRQVHEVPVGFKWFVPGLFSG SLAFGGEESAGASFLRMDGTVWTTDKDGILLALLAAEIAAVTGQTPSARYGELERRYGSPAYARIDAPAGAEQKKLLSQL TPDMITSEEIAGEPITAVLTRAPGNGAPLGGLKVTTENAWFAARPSGTEDKYKIYAESFQGPEHLAQVQAAAEEMVGKAL QP
Sequences:
>Translated_562_residues MILMTSRAQPTWKGDPSMAHDRAGRPARASDLDDIAHLVTAYFSRVPDPRDPAQRVVFGTSGHRGSSLDCAFNEAHILAI TQAIVEYRATRGITGPVYLARDTHALSEPAWTTALEVLAGNGVTAMIDARDRYTPTPALSHAVLRHNRGGTKHQADGIVV TPSHNPPRDGGFKYNPPHGGPADTGVTDAIAARANELLADGLTGVRRATYQQALATGVERYDYLDHYIADLPNVLNLDAI RGAGIRLGADPMGGASVDYWEEIGQRYDLELEVVNPFVDPTWRFMTLDSDGKIRMDPSSRYAMAGLVAIKDDYDISTGND ADADRHGIVTPDGGLMNPNHFLAVAIEYLVANRMGWDALTKIGKTVVTSSMVDRVVSVLGRQVHEVPVGFKWFVPGLFSG SLAFGGEESAGASFLRMDGTVWTTDKDGILLALLAAEIAAVTGQTPSARYGELERRYGSPAYARIDAPAGAEQKKLLSQL TPDMITSEEIAGEPITAVLTRAPGNGAPLGGLKVTTENAWFAARPSGTEDKYKIYAESFQGPEHLAQVQAAAEEMVGKAL QP >Mature_562_residues MILMTSRAQPTWKGDPSMAHDRAGRPARASDLDDIAHLVTAYFSRVPDPRDPAQRVVFGTSGHRGSSLDCAFNEAHILAI TQAIVEYRATRGITGPVYLARDTHALSEPAWTTALEVLAGNGVTAMIDARDRYTPTPALSHAVLRHNRGGTKHQADGIVV TPSHNPPRDGGFKYNPPHGGPADTGVTDAIAARANELLADGLTGVRRATYQQALATGVERYDYLDHYIADLPNVLNLDAI RGAGIRLGADPMGGASVDYWEEIGQRYDLELEVVNPFVDPTWRFMTLDSDGKIRMDPSSRYAMAGLVAIKDDYDISTGND ADADRHGIVTPDGGLMNPNHFLAVAIEYLVANRMGWDALTKIGKTVVTSSMVDRVVSVLGRQVHEVPVGFKWFVPGLFSG SLAFGGEESAGASFLRMDGTVWTTDKDGILLALLAAEIAAVTGQTPSARYGELERRYGSPAYARIDAPAGAEQKKLLSQL TPDMITSEEIAGEPITAVLTRAPGNGAPLGGLKVTTENAWFAARPSGTEDKYKIYAESFQGPEHLAQVQAAAEEMVGKAL QP
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI133922562, Length=406, Percent_Identity=25.8620689655172, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI290463102, Length=436, Percent_Identity=24.5412844036697, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI21361621, Length=375, Percent_Identity=25.6, Blast_Score=80, Evalue=4e-15, Organism=Escherichia coli, GI1786904, Length=543, Percent_Identity=57.6427255985267, Blast_Score=640, Evalue=0.0, Organism=Caenorhabditis elegans, GI17535441, Length=392, Percent_Identity=27.5510204081633, Blast_Score=96, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6323752, Length=561, Percent_Identity=24.9554367201426, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322722, Length=411, Percent_Identity=25.5474452554745, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI17864244, Length=433, Percent_Identity=26.3279445727483, Blast_Score=101, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 60328; Mature: 60328
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILMTSRAQPTWKGDPSMAHDRAGRPARASDLDDIAHLVTAYFSRVPDPRDPAQRVVFGT CEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEEEC SGHRGSSLDCAFNEAHILAITQAIVEYRATRGITGPVYLARDTHALSEPAWTTALEVLAG CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCHHHHHHHHHHC NGVTAMIDARDRYTPTPALSHAVLRHNRGGTKHQADGIVVTPSHNPPRDGGFKYNPPHGG CCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC PADTGVTDAIAARANELLADGLTGVRRATYQQALATGVERYDYLDHYIADLPNVLNLDAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RGAGIRLGADPMGGASVDYWEEIGQRYDLELEVVNPFVDPTWRFMTLDSDGKIRMDPSSR CCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCEEECCCCC YAMAGLVAIKDDYDISTGNDADADRHGIVTPDGGLMNPNHFLAVAIEYLVANRMGWDALT EEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH KIGKTVVTSSMVDRVVSVLGRQVHEVPVGFKWFVPGLFSGSLAFGGEESAGASFLRMDGT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCEECCCCCCCCCEEEEECCE VWTTDKDGILLALLAAEIAAVTGQTPSARYGELERRYGSPAYARIDAPAGAEQKKLLSQL EEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC TPDMITSEEIAGEPITAVLTRAPGNGAPLGGLKVTTENAWFAARPSGTEDKYKIYAESFQ CCCHHCHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCCCEEEEHHHCC GPEHLAQVQAAAEEMVGKALQP CHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MILMTSRAQPTWKGDPSMAHDRAGRPARASDLDDIAHLVTAYFSRVPDPRDPAQRVVFGT CEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEEEC SGHRGSSLDCAFNEAHILAITQAIVEYRATRGITGPVYLARDTHALSEPAWTTALEVLAG CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCHHHHHHHHHHC NGVTAMIDARDRYTPTPALSHAVLRHNRGGTKHQADGIVVTPSHNPPRDGGFKYNPPHGG CCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC PADTGVTDAIAARANELLADGLTGVRRATYQQALATGVERYDYLDHYIADLPNVLNLDAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RGAGIRLGADPMGGASVDYWEEIGQRYDLELEVVNPFVDPTWRFMTLDSDGKIRMDPSSR CCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCEEECCCCC YAMAGLVAIKDDYDISTGNDADADRHGIVTPDGGLMNPNHFLAVAIEYLVANRMGWDALT EEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH KIGKTVVTSSMVDRVVSVLGRQVHEVPVGFKWFVPGLFSGSLAFGGEESAGASFLRMDGT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCEECCCCCCCCCEEEEECCE VWTTDKDGILLALLAAEIAAVTGQTPSARYGELERRYGSPAYARIDAPAGAEQKKLLSQL EEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC TPDMITSEEIAGEPITAVLTRAPGNGAPLGGLKVTTENAWFAARPSGTEDKYKIYAESFQ CCCHHCHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCCCEEEEHHHCC GPEHLAQVQAAAEEMVGKALQP CHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8025683 [H]