Click here to switch to the map view.

The map label for this gene is 54026417

Identifier: 54026417

GI number: 54026417

Start: 4610603

End: 4613419

Strand: Reverse

Name: 54026417

Synonym: nfa44440

Alternate gene names: NA

Gene position: 4613419-4610603 (Counterclockwise)

Preceding gene: 54026418

Following gene: 54026416

Centisome position: 76.62

GC content: 63.9

Gene sequence:

>2817_bases
TTGGTGCAGAAGCGGAAGCTGATCGAGGTGGCGCTGCCGCTGGAGGCGATCAACCGGGAATCGGCCCGGGAGAAGTCGAT
CCGCCACGGTCACCCCTCGACTCTGCACCTGTGGTGGGCTCGTCGACCACTGGCTGCTGCCCGTGCGGTTCTCTTCGCCC
AGCTTGTCGATGATCCGTCGTCCCGTCCGGAGGAGTTCCCCACCGAGGAACTGCAGCGCAAGGAGCGCGAGCGGCTCCAC
AGGCTCATCGAGCGGCTCGTCGTGTGGGAGAACATCCGCGACCAGGACCTGCTGGCCGAGGCTCATGCCGAGATCCTCAA
GTCCACCGACGGCAACCCTCCGCCCATCCTCGACCCATTCGCGGGCGGCGGCACCATTCCGCTCGAGGCGCAGCGTCTCG
GTTTGGAGGCGCATGCCAGCGACCTCAACCCGGTCGCGGTACTGATCAACAAGGCGCTCATCGAGATCCCCCCGAAGTTC
CGTGACCAGCCGCCGGTGTCCCCCGGACTGGCCGACTCCCAAATCCGCACCTGGAAGGGCGCGGAGGGACTCGCCGCCGA
TGTGCGCGCATACGGCGAGTGGATGCGCGACCAAGCCGCCGAACGCATCGGGCACTTGTACCCGAAAGCCACCCTGCCCG
ACGGTAGTACGGCGAACGTCATCGCATGGATCTGGGCTCGTACCGTCACCTGCCCCAACCCGGCCTGCGGCATCGAAATG
CCTCTCGTCCGGTCATGGTGGCTCGGCAAGAAAAAGGGCAAAGAAGCGTACGTCGTCCCCACCGTCGGCAGCGACCCCAC
TCACCCCTCCGGGCATCGGGTGAAGTTCGAGATTGGGCATGACACGGCCGACGCCCCGACAACCTCCACCGATGGCACCG
TAGGGCGCACCGGTGCGGAGTGCGTCTCGTGCGGGACTGCGGTGTCTTTGGAGTACGTCCGGTCGACTAGCCGAACGACC
GGTCTCGGATCGCAGTTGATGGCAGTCGTCGCAGAGGGGCAACGCCAGCGGATATACCTTGCACCCGACGCTGCGCAGAT
CAACGCAGCGGATGTTGATCGACCTGCCGACGCTCCTCCTGGGGAGCTATTTGACTGGCCTGGCCGCATCAATGTCTATC
GGTACGGTCTGACCCAATTCTCCGATCTATTTACCAACCGCCAGCTCGTCGCTCTCACCACCTTCAGCGACCTGGTTGGT
GACGCGCGCGAGCGCGCCTTCCAGGACGCCCTCGCCGCGGGCATGCCCGAAGGCGACCGCCTCGAAAACGGCGGCACCGG
AGCTGCCGCCTACGCCGACGCCGTTGCCACATATCTGGGCCTGGGCCTGAGCAGGATGACCGACATTGCGAACGCACTGT
GCCGGTGGGAAAATACTAAAGAGCAAGTTCGCAACCTCTTCGGGCGGCAAGCGATTCCAATGCTGTGGGACTTTGCCGAA
ACAAGGCCCTTCGGTCGTGCGGCGGGCGCCTACGAGGTCAGCCTAGGAAGCCTGCTGAGGTCGCTCGCTGCTAATAGCGG
ACCCGTCGGCCGAGCCGAACAGCGCGACGCGATCGATGCAGTTAGCGATGGAGCGCTGATCAGCACCGACCCGCCGTACT
ACGACAACATTGGTTACTCGGATTTGTCCGACTTCTTCTACGTGTGGCTGCGACGCTCCCTTCGGACCGTCCATCCAGAT
CTTCTGGCCACGATGCTGGTACCGAAGGCCGAGGAACTGGTCGCGAACCCGCACCGGCATGACGGCAAGGACGGCGCCCG
AAAGTTCTTCGAGGATGGCTTCCGGCAGGTGTTCGCGAACGCTCGCAAGGTGGCGCGAGACGACTTTCCGATCACGGTCT
GGTACGCCTTCAAACAGTCCGAGTCCGACGACTCGGGCGAGGCGTCTACGGGCTGGGAGACATTGCTCGAGGGCATGATC
CGTGCAGGATGGGAGATCACCTCGACGTGGCCCAATCGCTCCGAGTTGAGCAATCGCATGATCGCGAGTGGCACCAATGC
GCTCGCCTCGTCAATCGTGCTTTCTCTCCGCCCCCGGCGCGAGGGTGCTCCCACCACAGACCGTCGCGGTTTCATCGCCT
CACTCGAGGCGGAACTCCCGGACGCGCTCCGGAAGCTCCAGCAGGGGCAGATTGCTCCAGTTGACCTGCCGCAGGCCGCA
ATTGGCCCTGGCATGGCCGTCTTCAGCCGATACAGCGCAGTCCTCGAGCCTGACGGCAAGAAGATGACCGTGCGCTCCGC
CCTCGCACGCATCAATGAGATTCTCGACCAGGTGCTCAATGAGCAGGAAGGCGACTTCGATGCCACCAGCCGGTTCGCCA
TCGCCTGGTACCGCCAGTACGGGTACGGCACTGGCAGATTCGGTGACGCCGACAACCTCGCGCGCGCCCGTAACACCAGC
GTCGAGATCATGGACCGCAGTGGCATCCTGACCAGCCGGACCGGCAGCGTTCAACTGATCAAGCCTGCGGATCTGCCACC
GGATTACGATGTGGCCACCGACACCCACATCAGCAACTGGGAAACACTCCACCATCTGATCCGGGTTCTCGAAGGGGAAG
GCGTCACCTCGGCTGGAAAGTTCCTCGCGGCCGCCCAAAACCGTCCTGGCGGCGAGATCGACGCTGACTTGGTGAAGGAG
CTTGCCCACCTCCTCTTCCGCATCGCGGAAAGCAATAGCTGGACCAAGGATGCGCTGAGCTTCAACACTCTGGTCACGAG
CTGGCCGGAGATCCTGGATGTAGCTCGGGCCCCGAAACAACCCAACTCCGGCGATCCGCAGGGTGCATTCGACTTCGACG
AGGATGACGACGCCTGA

Upstream 100 bases:

>100_bases
CCGGACAACCAGTAGACAGGCTGTATCACAAGGGCAGTCGCCTGCGATACACCGGCCGCGTGCCGACGATGACACGACTA
CCAGCACGAAGGATGAGGAA

Downstream 100 bases:

>100_bases
TGACGAAAACCCTCTCTGCCCATGAACACCCGCTGTGCAAGGTGTTCTCCAGCGACTACGAATTTACCATCCCCTCCTAC
CAGCGCCCCTACCGATGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Methylase Containing A Zn-Ribbon Module; DNA Methylase; Cytoplasmic Protein; Adenine-Specific DNA Methylase Containing A Zn-Ribbon

Number of amino acids: Translated: 938; Mature: 938

Protein sequence:

>938_residues
MVQKRKLIEVALPLEAINRESAREKSIRHGHPSTLHLWWARRPLAAARAVLFAQLVDDPSSRPEEFPTEELQRKERERLH
RLIERLVVWENIRDQDLLAEAHAEILKSTDGNPPPILDPFAGGGTIPLEAQRLGLEAHASDLNPVAVLINKALIEIPPKF
RDQPPVSPGLADSQIRTWKGAEGLAADVRAYGEWMRDQAAERIGHLYPKATLPDGSTANVIAWIWARTVTCPNPACGIEM
PLVRSWWLGKKKGKEAYVVPTVGSDPTHPSGHRVKFEIGHDTADAPTTSTDGTVGRTGAECVSCGTAVSLEYVRSTSRTT
GLGSQLMAVVAEGQRQRIYLAPDAAQINAADVDRPADAPPGELFDWPGRINVYRYGLTQFSDLFTNRQLVALTTFSDLVG
DARERAFQDALAAGMPEGDRLENGGTGAAAYADAVATYLGLGLSRMTDIANALCRWENTKEQVRNLFGRQAIPMLWDFAE
TRPFGRAAGAYEVSLGSLLRSLAANSGPVGRAEQRDAIDAVSDGALISTDPPYYDNIGYSDLSDFFYVWLRRSLRTVHPD
LLATMLVPKAEELVANPHRHDGKDGARKFFEDGFRQVFANARKVARDDFPITVWYAFKQSESDDSGEASTGWETLLEGMI
RAGWEITSTWPNRSELSNRMIASGTNALASSIVLSLRPRREGAPTTDRRGFIASLEAELPDALRKLQQGQIAPVDLPQAA
IGPGMAVFSRYSAVLEPDGKKMTVRSALARINEILDQVLNEQEGDFDATSRFAIAWYRQYGYGTGRFGDADNLARARNTS
VEIMDRSGILTSRTGSVQLIKPADLPPDYDVATDTHISNWETLHHLIRVLEGEGVTSAGKFLAAAQNRPGGEIDADLVKE
LAHLLFRIAESNSWTKDALSFNTLVTSWPEILDVARAPKQPNSGDPQGAFDFDEDDDA

Sequences:

>Translated_938_residues
MVQKRKLIEVALPLEAINRESAREKSIRHGHPSTLHLWWARRPLAAARAVLFAQLVDDPSSRPEEFPTEELQRKERERLH
RLIERLVVWENIRDQDLLAEAHAEILKSTDGNPPPILDPFAGGGTIPLEAQRLGLEAHASDLNPVAVLINKALIEIPPKF
RDQPPVSPGLADSQIRTWKGAEGLAADVRAYGEWMRDQAAERIGHLYPKATLPDGSTANVIAWIWARTVTCPNPACGIEM
PLVRSWWLGKKKGKEAYVVPTVGSDPTHPSGHRVKFEIGHDTADAPTTSTDGTVGRTGAECVSCGTAVSLEYVRSTSRTT
GLGSQLMAVVAEGQRQRIYLAPDAAQINAADVDRPADAPPGELFDWPGRINVYRYGLTQFSDLFTNRQLVALTTFSDLVG
DARERAFQDALAAGMPEGDRLENGGTGAAAYADAVATYLGLGLSRMTDIANALCRWENTKEQVRNLFGRQAIPMLWDFAE
TRPFGRAAGAYEVSLGSLLRSLAANSGPVGRAEQRDAIDAVSDGALISTDPPYYDNIGYSDLSDFFYVWLRRSLRTVHPD
LLATMLVPKAEELVANPHRHDGKDGARKFFEDGFRQVFANARKVARDDFPITVWYAFKQSESDDSGEASTGWETLLEGMI
RAGWEITSTWPNRSELSNRMIASGTNALASSIVLSLRPRREGAPTTDRRGFIASLEAELPDALRKLQQGQIAPVDLPQAA
IGPGMAVFSRYSAVLEPDGKKMTVRSALARINEILDQVLNEQEGDFDATSRFAIAWYRQYGYGTGRFGDADNLARARNTS
VEIMDRSGILTSRTGSVQLIKPADLPPDYDVATDTHISNWETLHHLIRVLEGEGVTSAGKFLAAAQNRPGGEIDADLVKE
LAHLLFRIAESNSWTKDALSFNTLVTSWPEILDVARAPKQPNSGDPQGAFDFDEDDDA
>Mature_938_residues
MVQKRKLIEVALPLEAINRESAREKSIRHGHPSTLHLWWARRPLAAARAVLFAQLVDDPSSRPEEFPTEELQRKERERLH
RLIERLVVWENIRDQDLLAEAHAEILKSTDGNPPPILDPFAGGGTIPLEAQRLGLEAHASDLNPVAVLINKALIEIPPKF
RDQPPVSPGLADSQIRTWKGAEGLAADVRAYGEWMRDQAAERIGHLYPKATLPDGSTANVIAWIWARTVTCPNPACGIEM
PLVRSWWLGKKKGKEAYVVPTVGSDPTHPSGHRVKFEIGHDTADAPTTSTDGTVGRTGAECVSCGTAVSLEYVRSTSRTT
GLGSQLMAVVAEGQRQRIYLAPDAAQINAADVDRPADAPPGELFDWPGRINVYRYGLTQFSDLFTNRQLVALTTFSDLVG
DARERAFQDALAAGMPEGDRLENGGTGAAAYADAVATYLGLGLSRMTDIANALCRWENTKEQVRNLFGRQAIPMLWDFAE
TRPFGRAAGAYEVSLGSLLRSLAANSGPVGRAEQRDAIDAVSDGALISTDPPYYDNIGYSDLSDFFYVWLRRSLRTVHPD
LLATMLVPKAEELVANPHRHDGKDGARKFFEDGFRQVFANARKVARDDFPITVWYAFKQSESDDSGEASTGWETLLEGMI
RAGWEITSTWPNRSELSNRMIASGTNALASSIVLSLRPRREGAPTTDRRGFIASLEAELPDALRKLQQGQIAPVDLPQAA
IGPGMAVFSRYSAVLEPDGKKMTVRSALARINEILDQVLNEQEGDFDATSRFAIAWYRQYGYGTGRFGDADNLARARNTS
VEIMDRSGILTSRTGSVQLIKPADLPPDYDVATDTHISNWETLHHLIRVLEGEGVTSAGKFLAAAQNRPGGEIDADLVKE
LAHLLFRIAESNSWTKDALSFNTLVTSWPEILDVARAPKQPNSGDPQGAFDFDEDDDA

Specific function: Unknown

COG id: COG1743

COG function: function code L; Adenine-specific DNA methylase containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102956; Mature: 102956

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQKRKLIEVALPLEAINRESAREKSIRHGHPSTLHLWWARRPLAAARAVLFAQLVDDPS
CCCHHHHHHHHHCHHHHCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCC
SRPEEFPTEELQRKERERLHRLIERLVVWENIRDQDLLAEAHAEILKSTDGNPPPILDPF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
AGGGTIPLEAQRLGLEAHASDLNPVAVLINKALIEIPPKFRDQPPVSPGLADSQIRTWKG
CCCCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC
AEGLAADVRAYGEWMRDQAAERIGHLYPKATLPDGSTANVIAWIWARTVTCPNPACGIEM
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEHHHHCCCCCCCCCCCC
PLVRSWWLGKKKGKEAYVVPTVGSDPTHPSGHRVKFEIGHDTADAPTTSTDGTVGRTGAE
HHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHH
CVSCGTAVSLEYVRSTSRTTGLGSQLMAVVAEGQRQRIYLAPDAAQINAADVDRPADAPP
HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC
GELFDWPGRINVYRYGLTQFSDLFTNRQLVALTTFSDLVGDARERAFQDALAAGMPEGDR
CCCCCCCCCEEEEEECHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCC
LENGGTGAAAYADAVATYLGLGLSRMTDIANALCRWENTKEQVRNLFGRQAIPMLWDFAE
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
TRPFGRAAGAYEVSLGSLLRSLAANSGPVGRAEQRDAIDAVSDGALISTDPPYYDNIGYS
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCHH
DLSDFFYVWLRRSLRTVHPDLLATMLVPKAEELVANPHRHDGKDGARKFFEDGFRQVFAN
HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
ARKVARDDFPITVWYAFKQSESDDSGEASTGWETLLEGMIRAGWEITSTWPNRSELSNRM
HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHH
IASGTNALASSIVLSLRPRREGAPTTDRRGFIASLEAELPDALRKLQQGQIAPVDLPQAA
HHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
IGPGMAVFSRYSAVLEPDGKKMTVRSALARINEILDQVLNEQEGDFDATSRFAIAWYRQY
HCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GYGTGRFGDADNLARARNTSVEIMDRSGILTSRTGSVQLIKPADLPPDYDVATDTHISNW
CCCCCCCCCHHHHHHHCCCCEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCH
ETLHHLIRVLEGEGVTSAGKFLAAAQNRPGGEIDADLVKELAHLLFRIAESNSWTKDALS
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
FNTLVTSWPEILDVARAPKQPNSGDPQGAFDFDEDDDA
HHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVQKRKLIEVALPLEAINRESAREKSIRHGHPSTLHLWWARRPLAAARAVLFAQLVDDPS
CCCHHHHHHHHHCHHHHCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCC
SRPEEFPTEELQRKERERLHRLIERLVVWENIRDQDLLAEAHAEILKSTDGNPPPILDPF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
AGGGTIPLEAQRLGLEAHASDLNPVAVLINKALIEIPPKFRDQPPVSPGLADSQIRTWKG
CCCCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC
AEGLAADVRAYGEWMRDQAAERIGHLYPKATLPDGSTANVIAWIWARTVTCPNPACGIEM
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEHHHHCCCCCCCCCCCC
PLVRSWWLGKKKGKEAYVVPTVGSDPTHPSGHRVKFEIGHDTADAPTTSTDGTVGRTGAE
HHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHH
CVSCGTAVSLEYVRSTSRTTGLGSQLMAVVAEGQRQRIYLAPDAAQINAADVDRPADAPP
HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC
GELFDWPGRINVYRYGLTQFSDLFTNRQLVALTTFSDLVGDARERAFQDALAAGMPEGDR
CCCCCCCCCEEEEEECHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCC
LENGGTGAAAYADAVATYLGLGLSRMTDIANALCRWENTKEQVRNLFGRQAIPMLWDFAE
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
TRPFGRAAGAYEVSLGSLLRSLAANSGPVGRAEQRDAIDAVSDGALISTDPPYYDNIGYS
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCHH
DLSDFFYVWLRRSLRTVHPDLLATMLVPKAEELVANPHRHDGKDGARKFFEDGFRQVFAN
HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
ARKVARDDFPITVWYAFKQSESDDSGEASTGWETLLEGMIRAGWEITSTWPNRSELSNRM
HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHH
IASGTNALASSIVLSLRPRREGAPTTDRRGFIASLEAELPDALRKLQQGQIAPVDLPQAA
HHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
IGPGMAVFSRYSAVLEPDGKKMTVRSALARINEILDQVLNEQEGDFDATSRFAIAWYRQY
HCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GYGTGRFGDADNLARARNTSVEIMDRSGILTSRTGSVQLIKPADLPPDYDVATDTHISNW
CCCCCCCCCHHHHHHHCCCCEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCH
ETLHHLIRVLEGEGVTSAGKFLAAAQNRPGGEIDADLVKELAHLLFRIAESNSWTKDALS
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
FNTLVTSWPEILDVARAPKQPNSGDPQGAFDFDEDDDA
HHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA