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The map label for this gene is ohrR [H]

Identifier: 54026373

GI number: 54026373

Start: 4561929

End: 4562375

Strand: Reverse

Name: ohrR [H]

Synonym: nfa44020

Alternate gene names: 54026373

Gene position: 4562375-4561929 (Counterclockwise)

Preceding gene: 54026384

Following gene: 54026372

Centisome position: 75.77

GC content: 70.25

Gene sequence:

>447_bases
GTGGGTGATGAACTGGCGCTCGATCAGCAGGTCTGCTTTCCGCTGTATGCGGCCTCGCGGGCGATGACGGCGGTGTACCG
GCCCCTGTTGGAGGGGTTGGGGCTGACGTATCCGCAGTACCTGGTGATGCTGGTGTTGTGGGAGCGGGACGGGCGCAGCG
TGGGGGAGTTGTGTCAGGAGCTGGCGTTGGACACCGGCACCGTCTCGCCGTTGTTGAAGCGGCTGGCCGCGTCGGGGCTG
GTGGAGCGGGTGCGCTCGACCGCCGACGAGCGGCGGGTGGAGATCCGGCTGACCGACCGGGGCCGGGCGCTGCGCGCGCG
AGCCTGCGACATTCCCCGCGAGCTGGCCGACGCGACCGGTATGTCGCTCGATGAACTCGCGGCGCTGCGCACGACGCTGC
GCCGCCTGACGCGGGCACTCACGTCCGCCGATTCCCCGAAGGAGTAA

Upstream 100 bases:

>100_bases
CTGTCCGCGACTGGTTCGCTGATCCATTTGAGGTTGCAGGTGGGCACGGCGCTGCGCCAGTCTGTTGTGCACAATATAGT
TGTGGGCTACTGTTCTTGGG

Downstream 100 bases:

>100_bases
ACGATGCAGGTCCTCTACACCGCCGAAGCGCTGGCCACCGGCGACGGGCGCAACGGCCGCAGCCGCACCACCGACGGCAC
CATCGACCTGAAGCTGGCGG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGDELALDQQVCFPLYAASRAMTAVYRPLLEGLGLTYPQYLVMLVLWERDGRSVGELCQELALDTGTVSPLLKRLAASGL
VERVRSTADERRVEIRLTDRGRALRARACDIPRELADATGMSLDELAALRTTLRRLTRALTSADSPKE

Sequences:

>Translated_148_residues
MGDELALDQQVCFPLYAASRAMTAVYRPLLEGLGLTYPQYLVMLVLWERDGRSVGELCQELALDTGTVSPLLKRLAASGL
VERVRSTADERRVEIRLTDRGRALRARACDIPRELADATGMSLDELAALRTTLRRLTRALTSADSPKE
>Mature_147_residues
GDELALDQQVCFPLYAASRAMTAVYRPLLEGLGLTYPQYLVMLVLWERDGRSVGELCQELALDTGTVSPLLKRLAASGLV
ERVRSTADERRVEIRLTDRGRALRARACDIPRELADATGMSLDELAALRTTLRRLTRALTSADSPKE

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16391; Mature: 16260

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDELALDQQVCFPLYAASRAMTAVYRPLLEGLGLTYPQYLVMLVLWERDGRSVGELCQE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH
LALDTGTVSPLLKRLAASGLVERVRSTADERRVEIRLTDRGRALRARACDIPRELADATG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCHHHHHHHCC
MSLDELAALRTTLRRLTRALTSADSPKE
CCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GDELALDQQVCFPLYAASRAMTAVYRPLLEGLGLTYPQYLVMLVLWERDGRSVGELCQE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH
LALDTGTVSPLLKRLAASGLVERVRSTADERRVEIRLTDRGRALRARACDIPRELADATG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCHHHHHHHCC
MSLDELAALRTTLRRLTRALTSADSPKE
CCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]