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The map label for this gene is crtI [H]

Identifier: 54026370

GI number: 54026370

Start: 4558534

End: 4560066

Strand: Reverse

Name: crtI [H]

Synonym: nfa43990

Alternate gene names: 54026370

Gene position: 4560066-4558534 (Counterclockwise)

Preceding gene: 54026371

Following gene: 54026369

Centisome position: 75.73

GC content: 74.23

Gene sequence:

>1533_bases
ATGCGCACCGTGCGCGGGAGAACAGATCGCGTGGTCGTGATCGGGGCAGGGCTGGCGGGGCTGTCGGCGGCACTGCACCT
GGCCGGGCGTGGCCGGGAGGTCGTCGTGCTCGAACGCGCGGCGGTGCCCGGCGGACGCGCCGGACGGCTCGACGTCGACG
GCTACCGGCTCGACACCGGGCCGACCGTGCTGACCATGCCCGACATCCTCGAACAGACCTTCGCGGCCGTCGGCGACACC
CTCGGCGACCGCCTCGACCTGCGGCCGCTGCACCCGGCCTACGACGCGCGCTTCGCCGACGGCACCCGGTTGGCCGTGCA
CAGCGAGCCCGACGCGATGTATGCGGAGGTGCGGCGGTTCGCGGGTGCGGCGGAGGCGGATCGCTATGTGCGGCTGCGGG
ACTGGCTGGGCAGGCTGTATCGCGCGCAGTACGAACGGTTCATCGCGGCCAACCTGGATTCCCCGCTCTCGGCGGTGACG
CCCGCGCTCGCCCGGGTGGTCGCGCTCGGCGGATTCCGGTCGGTCGAGACGAAGATCGCGCAGATGCTGCGCGACGAACG
GCTGCGGCGGGTGTTCAGTTTCCAGTCGCTGTACGCGGGCGTGTCGCCGCGGCGCGCGCTGGCGGTGTACGCGGTGATCG
CCTACATGGACACCGTTGCGGGAGTGTACTTTCCGCGCGGCGGAGTGCGGGCGCTGCCGGACGCGCTGGCCGCGGCCGCT
GTGGACGCCGGGGTGGACCTGCGCTACGACGCGGCGGTGACGGCGCTCGAGCGCCGCGGCACACGGGTCACCGCGGTCCG
GACGGCCGCGGGGGAGCGGCTGCCCTGCGACGCGGTGGTCGCCACGACCGAACCGCACCTCACCTACCGCCTGCTCGGTG
CGGCGCCGCGCCGGGTGGTTCCGCTGCGGGCGGCGCCCTCGGCCGCGATCGTGCACGTCGGGTTGCCGGCCGGAGCCGAC
ATCGGCCACCACACGATCGGGTTCGGGGCGGCCTGGCGGCGAACCTTCGACGAACTCATCACCGAAGGGCGCACCATGAG
CGACCCGTCCCTGCTCATCACCCGGCCCACCGCCACCGATCCCGGCCTCGCCCCACCCGGCCGCGATCTGGTCTCGGTGC
TGGCGCCGGTGCCGAACCTCGCGGTGCACCGGGATGGTTCGGTCCTGGACTGGGACGCCGACGGGGAGCGGTATCTGCGC
GAGGTCCTCGCGGTCGCCGCCGCACGGGTCCATCCGGGCCTGGCCGACGCGCAGATCCTGGCGACGATCACTCCCGCCGA
CTGGGCGCGCGCGGACATGTTCGCGGGCACCCCGTTCAGCTATGCCCACACGCTCACCCAGACCGGCCCGTTCCGGCCGG
GCAACTTCCCCCGCGCCTTCGACAACGTGGTGCTCGCCGGTTCGGGCACGACCCCCGGCGTCGGCGTGCCGACCGCCCTG
ATCTCCGGGCAACTCGCCGCGGACCGGATCACCGGCGTGGTGCGGGGGACCGCTCGGGTGCGAGCGACGGGAGCCCGCCA
TGACGCGGCGTGA

Upstream 100 bases:

>100_bases
GCCGCCATCGCCGGGCTCGAGCCGGGCGCCCGCGCGGTGCTCACCCATCTCGCCCACGCGTGCACCGACCGGTCGCGCTG
ACATCTCGGAGGAGGAATCG

Downstream 100 bases:

>100_bases
ACTCGATGCCGCGGGCATCACCGACCCCGCCCTGCGCCACGCCTACACCCGGTGCCGCGCGCTGAACGCCGCGCACGGGC
GCACCTATTTCCTGGCGACC

Product: putative phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MRTVRGRTDRVVVIGAGLAGLSAALHLAGRGREVVVLERAAVPGGRAGRLDVDGYRLDTGPTVLTMPDILEQTFAAVGDT
LGDRLDLRPLHPAYDARFADGTRLAVHSEPDAMYAEVRRFAGAAEADRYVRLRDWLGRLYRAQYERFIAANLDSPLSAVT
PALARVVALGGFRSVETKIAQMLRDERLRRVFSFQSLYAGVSPRRALAVYAVIAYMDTVAGVYFPRGGVRALPDALAAAA
VDAGVDLRYDAAVTALERRGTRVTAVRTAAGERLPCDAVVATTEPHLTYRLLGAAPRRVVPLRAAPSAAIVHVGLPAGAD
IGHHTIGFGAAWRRTFDELITEGRTMSDPSLLITRPTATDPGLAPPGRDLVSVLAPVPNLAVHRDGSVLDWDADGERYLR
EVLAVAAARVHPGLADAQILATITPADWARADMFAGTPFSYAHTLTQTGPFRPGNFPRAFDNVVLAGSGTTPGVGVPTAL
ISGQLAADRITGVVRGTARVRATGARHDAA

Sequences:

>Translated_510_residues
MRTVRGRTDRVVVIGAGLAGLSAALHLAGRGREVVVLERAAVPGGRAGRLDVDGYRLDTGPTVLTMPDILEQTFAAVGDT
LGDRLDLRPLHPAYDARFADGTRLAVHSEPDAMYAEVRRFAGAAEADRYVRLRDWLGRLYRAQYERFIAANLDSPLSAVT
PALARVVALGGFRSVETKIAQMLRDERLRRVFSFQSLYAGVSPRRALAVYAVIAYMDTVAGVYFPRGGVRALPDALAAAA
VDAGVDLRYDAAVTALERRGTRVTAVRTAAGERLPCDAVVATTEPHLTYRLLGAAPRRVVPLRAAPSAAIVHVGLPAGAD
IGHHTIGFGAAWRRTFDELITEGRTMSDPSLLITRPTATDPGLAPPGRDLVSVLAPVPNLAVHRDGSVLDWDADGERYLR
EVLAVAAARVHPGLADAQILATITPADWARADMFAGTPFSYAHTLTQTGPFRPGNFPRAFDNVVLAGSGTTPGVGVPTAL
ISGQLAADRITGVVRGTARVRATGARHDAA
>Mature_510_residues
MRTVRGRTDRVVVIGAGLAGLSAALHLAGRGREVVVLERAAVPGGRAGRLDVDGYRLDTGPTVLTMPDILEQTFAAVGDT
LGDRLDLRPLHPAYDARFADGTRLAVHSEPDAMYAEVRRFAGAAEADRYVRLRDWLGRLYRAQYERFIAANLDSPLSAVT
PALARVVALGGFRSVETKIAQMLRDERLRRVFSFQSLYAGVSPRRALAVYAVIAYMDTVAGVYFPRGGVRALPDALAAAA
VDAGVDLRYDAAVTALERRGTRVTAVRTAAGERLPCDAVVATTEPHLTYRLLGAAPRRVVPLRAAPSAAIVHVGLPAGAD
IGHHTIGFGAAWRRTFDELITEGRTMSDPSLLITRPTATDPGLAPPGRDLVSVLAPVPNLAVHRDGSVLDWDADGERYLR
EVLAVAAARVHPGLADAQILATITPADWARADMFAGTPFSYAHTLTQTGPFRPGNFPRAFDNVVLAGSGTTPGVGVPTAL
ISGQLAADRITGVVRGTARVRATGARHDAA

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 54195; Mature: 54195

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVRGRTDRVVVIGAGLAGLSAALHLAGRGREVVVLERAAVPGGRAGRLDVDGYRLDTG
CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEECCCEEECCC
PTVLTMPDILEQTFAAVGDTLGDRLDLRPLHPAYDARFADGTRLAVHSEPDAMYAEVRRF
CEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEEECCCHHHHHHHHHH
AGAAEADRYVRLRDWLGRLYRAQYERFIAANLDSPLSAVTPALARVVALGGFRSVETKIA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
QMLRDERLRRVFSFQSLYAGVSPRRALAVYAVIAYMDTVAGVYFPRGGVRALPDALAAAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VDAGVDLRYDAAVTALERRGTRVTAVRTAAGERLPCDAVVATTEPHLTYRLLGAAPRRVV
HHCCCCEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCCCEEE
PLRAAPSAAIVHVGLPAGADIGHHTIGFGAAWRRTFDELITEGRTMSDPSLLITRPTATD
EEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
PGLAPPGRDLVSVLAPVPNLAVHRDGSVLDWDADGERYLREVLAVAAARVHPGLADAQIL
CCCCCCCHHHHHHHCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEE
ATITPADWARADMFAGTPFSYAHTLTQTGPFRPGNFPRAFDNVVLAGSGTTPGVGVPTAL
EEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHCCEEEECCCCCCCCCCCHHH
ISGQLAADRITGVVRGTARVRATGARHDAA
HCCCHHHHHHHHHHCCCEEEEECCCCCCCC
>Mature Secondary Structure
MRTVRGRTDRVVVIGAGLAGLSAALHLAGRGREVVVLERAAVPGGRAGRLDVDGYRLDTG
CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEECCCEEECCC
PTVLTMPDILEQTFAAVGDTLGDRLDLRPLHPAYDARFADGTRLAVHSEPDAMYAEVRRF
CEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEEECCCHHHHHHHHHH
AGAAEADRYVRLRDWLGRLYRAQYERFIAANLDSPLSAVTPALARVVALGGFRSVETKIA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
QMLRDERLRRVFSFQSLYAGVSPRRALAVYAVIAYMDTVAGVYFPRGGVRALPDALAAAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VDAGVDLRYDAAVTALERRGTRVTAVRTAAGERLPCDAVVATTEPHLTYRLLGAAPRRVV
HHCCCCEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCCCEEE
PLRAAPSAAIVHVGLPAGADIGHHTIGFGAAWRRTFDELITEGRTMSDPSLLITRPTATD
EEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
PGLAPPGRDLVSVLAPVPNLAVHRDGSVLDWDADGERYLREVLAVAAARVHPGLADAQIL
CCCCCCCHHHHHHHCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEE
ATITPADWARADMFAGTPFSYAHTLTQTGPFRPGNFPRAFDNVVLAGSGTTPGVGVPTAL
EEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHCCEEEECCCCCCCCCCCHHH
ISGQLAADRITGVVRGTARVRATGARHDAA
HCCCHHHHHHHHHHCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8917308 [H]