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The map label for this gene is 54026354

Identifier: 54026354

GI number: 54026354

Start: 4543613

End: 4544401

Strand: Reverse

Name: 54026354

Synonym: nfa43830

Alternate gene names: NA

Gene position: 4544401-4543613 (Counterclockwise)

Preceding gene: 54026355

Following gene: 54026353

Centisome position: 75.47

GC content: 68.95

Gene sequence:

>789_bases
GTGACGGATTCGAGCGCCGGGTGGCACGCGCCGCCCGGCGCTCGTCGCTCTCTCATCGGGGAGGGCACGCCGCGCGGCGG
CGGGAGCATACTTGGATGCGTGATGGCTATGGACGAAATGACCCCGGAGACCGCGGCGAGCGTGATCGCCAAGGTCGTGG
GTGCCGGTCGTCCGCAAACGACGGGCACCTTCCGATTCCGCTACGCGGACCAGCGCTGGGAGTGGTCCGACGAGGTCGCC
GTCCTGCACGGCTACGCGCCCGGCAGCGTCACGCCGACCACCGAGCTGCTGCTCTCGCACAAGCATCCCGAAGACCGCGA
ACAGGTCGCGGGCACCATCGACAACGCGGTGCGCCGCGCCGAGCCGTTCTGCAGCCGTCACCGCATCATCGACACCTCCG
GCCGGGTCCGTGAGGTGATCGTGCTCGGCGACGCGATGACCGACGACGCGGGCAACACCGTCGGCACCACCGGCTACTAC
ATCGACCTCACCGAAGCCATGAACGCCGAGCGCCGCGAGGTGCTCGACGAGACCCTGCCGGAGCTGGTGCGCTCCCGCGC
GGTCATCGAACAGGCCAAAGGCGTGCTGATGCGCATGTACCGCATCAACGCCGATCAGGCGTTCCGGGTGCTGCAATGGC
GCTCCCAGGAGACCAACGTCAAACTCCGCACGCTCGCCGAGCGCCTCATCGCCGAGCTCGACACCCTGCCCCCGGTGACC
CCGGAGACCCAGACGGCGTTCGACCACCTGCTGTTGACCCTGCACGACCGCATGCCGGAGCAGAACTGA

Upstream 100 bases:

>100_bases
GGACCCCCGTGAGGCGGGCCGCAAGGGTGCGCAGGCACAGCCCACCGAGGCCAAGATCCGAGGCGGCGAACACAGCCGCA
GCGGCGGCAACTGACCTTCA

Downstream 100 bases:

>100_bases
CCGACCGGCCGGTGTGGCCGAGATCGCTGTTCTGGTTGGCGGCGCGCCCGCTGGGTAAGCCCGATCGTGACACGGACCGA
CGACCGGAAAGGCATGAGCG

Product: putative transcription antitermination regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTDSSAGWHAPPGARRSLIGEGTPRGGGSILGCVMAMDEMTPETAASVIAKVVGAGRPQTTGTFRFRYADQRWEWSDEVA
VLHGYAPGSVTPTTELLLSHKHPEDREQVAGTIDNAVRRAEPFCSRHRIIDTSGRVREVIVLGDAMTDDAGNTVGTTGYY
IDLTEAMNAERREVLDETLPELVRSRAVIEQAKGVLMRMYRINADQAFRVLQWRSQETNVKLRTLAERLIAELDTLPPVT
PETQTAFDHLLLTLHDRMPEQN

Sequences:

>Translated_262_residues
MTDSSAGWHAPPGARRSLIGEGTPRGGGSILGCVMAMDEMTPETAASVIAKVVGAGRPQTTGTFRFRYADQRWEWSDEVA
VLHGYAPGSVTPTTELLLSHKHPEDREQVAGTIDNAVRRAEPFCSRHRIIDTSGRVREVIVLGDAMTDDAGNTVGTTGYY
IDLTEAMNAERREVLDETLPELVRSRAVIEQAKGVLMRMYRINADQAFRVLQWRSQETNVKLRTLAERLIAELDTLPPVT
PETQTAFDHLLLTLHDRMPEQN
>Mature_261_residues
TDSSAGWHAPPGARRSLIGEGTPRGGGSILGCVMAMDEMTPETAASVIAKVVGAGRPQTTGTFRFRYADQRWEWSDEVAV
LHGYAPGSVTPTTELLLSHKHPEDREQVAGTIDNAVRRAEPFCSRHRIIDTSGRVREVIVLGDAMTDDAGNTVGTTGYYI
DLTEAMNAERREVLDETLPELVRSRAVIEQAKGVLMRMYRINADQAFRVLQWRSQETNVKLRTLAERLIAELDTLPPVTP
ETQTAFDHLLLTLHDRMPEQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29037; Mature: 28906

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50921 ANTAR ; PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSSAGWHAPPGARRSLIGEGTPRGGGSILGCVMAMDEMTPETAASVIAKVVGAGRPQT
CCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
TGTFRFRYADQRWEWSDEVAVLHGYAPGSVTPTTELLLSHKHPEDREQVAGTIDNAVRRA
CCEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EPFCSRHRIIDTSGRVREVIVLGDAMTDDAGNTVGTTGYYIDLTEAMNAERREVLDETLP
HHHHHHCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHH
ELVRSRAVIEQAKGVLMRMYRINADQAFRVLQWRSQETNVKLRTLAERLIAELDTLPPVT
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
PETQTAFDHLLLTLHDRMPEQN
CCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDSSAGWHAPPGARRSLIGEGTPRGGGSILGCVMAMDEMTPETAASVIAKVVGAGRPQT
CCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
TGTFRFRYADQRWEWSDEVAVLHGYAPGSVTPTTELLLSHKHPEDREQVAGTIDNAVRRA
CCEEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EPFCSRHRIIDTSGRVREVIVLGDAMTDDAGNTVGTTGYYIDLTEAMNAERREVLDETLP
HHHHHHCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHH
ELVRSRAVIEQAKGVLMRMYRINADQAFRVLQWRSQETNVKLRTLAERLIAELDTLPPVT
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
PETQTAFDHLLLTLHDRMPEQN
CCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2447183; 11234002 [H]